Heatmap: Cluster_229 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
0.28 4.63 0.77 2.63 2.27 - -1.23 - - - -0.96 2.71 - 0.61 - - - - - -2.38 - -1.42 - - - - - - - - - - - - - - - - - - - -0.57 - - - - - - -
- 3.84 - 3.45 3.93 2.75 -0.66 -0.65 - - - - - - - - - - - - - -0.85 - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 4.88 - - 3.92 - - - - - - - - - - - - - - - 0.19 0.24 - - - - - - - - - - - - - - - - - - - 1.09 - - - - - - -
- 3.63 - -1.95 4.03 2.56 - -3.08 - - -5.55 -0.82 - - - - - -2.51 - -2.45 -1.48 - -3.31 -1.63 - - - - - - - 2.41 - - - - 0.26 1.42 - -1.41 -3.28 0.38 -2.63 - 0.17 - - - -
0.71 3.35 1.42 1.61 4.29 1.05 - -2.11 -2.08 - - - - 3.15 - - -1.3 -5.79 - - - - - -3.71 - - - - - - - - - - - - - - - - - - - - - - - - -
0.14 2.8 -0.2 3.1 3.62 3.0 -1.91 -1.9 -1.76 -3.15 -0.63 -1.14 1.72 - - - -0.27 -2.19 - -2.71 -1.97 -3.1 -3.38 -1.02 - - - - - - - 1.39 - - - - - - - - -2.28 - - -3.98 -0.31 - - - -
0.1 2.45 -0.16 1.34 4.06 1.04 -0.4 -0.55 -0.15 -1.65 -0.6 -1.02 - 1.6 - - 1.58 -1.23 - -1.96 - - -4.51 -2.8 1.83 0.19 - - - - - - - - - - -0.49 - - -3.73 -1.98 -0.78 -2.97 1.11 -1.02 -1.13 - - -
- 4.41 - 0.08 4.1 - 2.09 - - - -2.49 - - 1.05 - - - - - - - - - - - - - - - - - - - - - - - - - -1.06 - - - 1.33 - - - - -
-0.19 2.13 - - 5.31 2.03 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-4.06 3.17 - -2.27 5.04 0.15 - -1.7 -2.03 - -3.48 - - -0.59 0.9 - - -6.01 - - - -4.12 - - - -0.21 - - - - - 0.61 - - - - - - - - - - -2.78 - - - - - -
-0.99 3.97 - -0.41 4.4 2.68 1.27 - -0.12 - - - - - - - - - - -5.38 - - - - - - - - - - - -0.3 - - - - - - - -2.18 - - - -2.68 - - - - -
- 4.73 - - 4.48 - - - - - -2.44 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.6 3.52 - 2.92 4.25 1.18 1.04 1.39 -1.81 - -4.13 - - - - - - - - -4.65 -4.11 -4.48 -5.48 -1.03 -0.47 - - - - - - 1.01 - - - - - - - - -3.56 -4.41 - - - - - - -
- 2.89 - - 5.06 1.31 1.78 - - - - - - - - - - - - - - -0.29 -1.46 - - - - - - - - 0.21 - - - - - - - - - - - - - - - - -
- 3.73 - 0.18 4.55 1.1 - -0.5 - 1.26 -0.55 - 0.8 1.33 - - - -2.67 - -4.23 - - - -2.15 - - - - - - - - - - - - - - - - - - - -0.96 - - - - -
1.07 3.32 -0.55 2.41 3.74 2.62 -1.34 -0.59 -2.29 -6.57 -2.68 - 0.02 -2.13 - - 0.86 -2.74 0.73 -0.42 -4.9 -6.98 - - -0.66 - - - - - - -3.03 - - - - - -3.35 - -4.3 -7.05 -4.13 -2.7 0.74 -1.09 -0.09 - - -2.93
2.04 4.4 - - 4.57 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.43 2.18 -2.33 1.14 4.31 2.29 1.19 2.26 - - -6.15 - -1.06 2.35 - - -2.79 -3.35 - -6.75 -4.07 - -4.85 -2.75 - -1.59 - - -1.55 - - -2.41 -1.45 - -1.16 - -1.58 - - - -2.64 -4.0 -3.91 -2.02 - - -0.13 - -
-2.69 4.67 - 3.82 3.17 - - - - - - - - - - - - -2.11 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.07 3.71 - - 4.22 - - - - - -2.52 - - 1.95 - - - - - 0.15 - - - - 3.32 - - - - - - - - - - - - - - - - - - - - - - - -
-0.59 3.83 -0.39 -0.62 3.14 1.53 2.38 3.04 1.3 - -2.7 -1.59 - 0.55 - - - -3.53 - - -3.61 - - -2.67 - - - - - - - 1.23 - - - - - - - -1.8 - - - -2.69 - - - - -
-1.53 1.34 -2.79 0.1 4.94 1.28 0.33 0.6 - -3.06 -4.18 -1.5 1.07 1.22 - - - -0.52 - -4.49 -2.57 -3.28 -1.4 -2.62 - - - - - - - - - - - - 0.45 - - - -4.25 -1.03 -1.6 -2.94 - -4.16 - - -
0.31 3.6 -0.04 0.9 4.09 - -0.59 2.72 1.34 - - - - 1.25 - - - - - - - - - -1.6 - - - - - - - 1.71 - - - - - - - - - - - - - - - - -
-4.95 3.12 - 1.2 4.64 0.83 1.63 2.51 - - -4.55 - - - - - - - - - - - - - 1.31 - - - - - - - - - - - - - - - - - - - - - - - -
-3.25 2.15 -0.9 1.35 5.22 0.98 -0.54 0.23 - - - - - - - - - - - - - - - -4.24 - - - - - - - -2.93 - - - - - - - - - - - - - - - - -
- 4.19 - - 3.34 2.89 - - - - - - - - - - - - - -4.32 - - - - - 2.58 - - - - - - - - - - - - - - - - - - - - - - 2.86
- 2.44 - 3.04 4.87 2.35 -0.16 - - - -3.57 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.05 4.17 - - 4.1 - - - 2.11 1.46 -0.61 - - - - - - - - - - - - - - - - - - - - 2.01 - - - - - - - - - - - - - - - - -
0.2 3.76 - -1.63 4.6 - - - -1.3 - -3.41 - - -0.22 - - - -2.41 - -6.39 - -1.7 - -1.76 - - - - - 0.5 - -0.81 - - - - 0.63 - - - -2.69 -2.12 - -2.74 -0.11 - - - 1.33
- 1.96 - - 5.26 - 0.76 - 2.38 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 3.64 0.05 3.96 4.04 - - -0.26 - - -0.34 - - 0.95 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.12 3.02 - 2.11 4.8 2.28 - - 0.68 - - - - - - - -0.65 - - - - - - - - - - - - - - -0.17 - - - - - - - -1.94 - - - - - - - - -
0.09 2.26 -1.23 2.22 4.59 1.36 0.74 0.27 -2.5 -1.89 -2.79 -1.75 -2.16 -0.16 0.49 - -1.76 -2.04 - -2.03 -3.39 -3.28 -6.07 -3.75 - -2.51 -0.1 - -1.65 -1.98 - - - - - -2.21 -1.31 -2.45 - -3.15 -2.94 -4.16 -2.23 -1.97 - -0.69 - - -2.03
0.57 2.67 -0.87 0.26 3.81 0.41 -2.99 0.08 -0.01 - -2.32 -1.22 - 3.74 - - -1.17 -1.36 - -1.1 -0.83 -3.64 -1.79 0.17 - - -0.0 - - - - - - - - 0.2 - - - -3.66 -0.8 -2.71 -1.34 -3.68 - - 0.11 - -
-4.79 1.08 -0.98 -0.25 4.73 - -0.25 -2.11 -0.4 - - - - - - - - - - -3.77 0.0 -1.95 -2.36 -2.26 - -0.11 1.93 - - - 0.25 0.24 - - - 1.14 - 2.1 - -1.99 -0.16 -1.39 -2.82 -3.15 - - - - -
-5.46 2.49 - 0.74 5.04 1.0 0.33 - - - -5.25 - - - - - -4.23 -1.04 - -0.73 - - - -3.94 - -1.19 0.29 - - - - -2.89 - - - -0.0 - - - -4.73 -3.68 - - 0.47 - - - - -
-0.15 0.93 - 0.87 4.68 3.39 -0.14 -3.01 2.75 - -3.72 -1.42 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -3.04 - - - - -
- 1.7 - 1.13 5.35 1.08 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -0.36 - - - - - - -
- 4.35 - - 3.01 - - - 1.34 - -0.97 - 1.08 - - - -1.46 -0.84 - - - - - -0.29 - 2.84 - - - - - 2.02 - - - - - - - - - - - - - 1.29 - - -
0.68 3.24 -0.93 -1.42 4.87 1.02 - -2.58 -0.9 - -5.04 -0.82 - -0.38 - - - - - -3.07 -2.13 - - -1.01 - - - - - - - -0.28 - - - - - - - - - - - 0.07 - -0.0 - - -
-1.02 4.18 -1.42 - 4.22 3.39 - - -0.12 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.63 2.51 -3.42 2.38 4.22 2.5 0.01 0.57 -1.11 -4.18 -3.14 - -3.34 -0.05 - - -5.7 -2.51 0.96 -1.75 - -5.18 - -5.5 0.49 -1.49 - - - -3.95 -3.86 -2.83 - - - - - - - - -4.66 -4.47 - -1.9 1.0 0.05 - - -
-3.1 2.23 - 2.28 4.78 - -2.37 -1.37 - -2.61 -1.86 - - 3.4 - - - - - -1.77 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-4.13 3.52 -1.4 1.95 3.4 2.03 - -0.53 1.01 - -2.77 0.27 0.52 2.75 - - -1.56 -3.6 - -0.58 -3.75 -4.23 -2.96 -1.53 - -0.64 -0.7 - - - - -0.14 - - - - - - - -3.87 - -2.48 -2.04 -1.29 -0.75 0.01 - - -
-3.29 3.12 -2.48 2.32 5.07 -0.08 - - - - - - - -0.85 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.38 3.76 -5.02 2.95 3.38 2.25 -0.72 -4.98 - -4.22 -5.55 - - -0.17 - - -3.85 -4.0 - - - - - - - - - - - - - - - - - - - - - - - - - -1.22 - - 3.27 -1.01 -
-2.11 3.66 2.64 2.88 4.11 0.34 -0.89 - - - -4.97 - - - - - - -5.39 - -8.0 - - - - - - - - - - - - - - - - - - - - - - - -2.33 - - 1.72 - -
-3.18 3.79 -0.6 0.93 4.94 - - - - - -1.8 - - - - - -1.66 -2.52 - - - - - - - - - - - - - - - - - - - - - - - -0.49 - -1.52 - - - - -
-1.33 1.53 -3.5 -0.17 4.03 -1.22 -1.3 -1.12 -1.03 -5.97 -0.67 -4.12 2.01 2.35 -0.4 0.25 -1.35 -1.08 - -0.17 -1.51 -3.88 -1.63 -4.17 0.35 0.4 -1.69 -0.93 -1.94 - - -4.43 -0.75 - -2.44 -0.94 -2.4 -2.74 -1.69 -4.79 -2.25 -3.5 -4.31 -0.02 1.87 0.51 -2.63 - -
- 4.4 -1.9 - 3.85 - - - 2.84 - -4.43 - - - - - - - - - - - - -0.05 - - - - - - - 1.52 - - 1.19 - - - - - - - - - - - - - -
0.39 4.6 - 2.09 3.64 - 1.21 - -0.25 - -0.67 - - - - - - - - -2.6 - - - - - - - - - - - 0.64 - - - - - - - - - - - 0.23 - - - - -
- 3.41 - 3.2 4.5 - - - - - -4.83 - - 2.6 - - - - - -2.09 - - - - - - - - - - - - - - - - - - - - - - - -2.07 - - - - -
0.46 3.26 -0.71 - 4.84 1.02 - - - - -10.26 -5.57 - - - - - - - -0.88 - -1.71 - 0.08 - - - - - - - -0.11 - - - - - - - 0.55 0.85 -11.08 -0.94 - - - - - -
-2.8 1.26 -1.51 -0.59 4.79 0.88 - - - - - 1.28 - - - - - -3.04 - 0.13 -3.31 -3.54 - -3.59 - 0.03 - - - - - -1.48 - - 1.52 - - - - -0.12 -0.04 1.31 0.5 -2.85 0.01 - - -0.2 -
-1.34 3.25 -3.05 1.58 4.29 -1.23 1.89 2.5 -2.64 -4.28 -3.87 -1.68 - -0.84 - - - 1.35 - -1.8 -3.07 -4.73 0.11 - - - - - - - - - - - - - -0.71 - - - - -3.58 - - -1.44 -1.89 - - -
-3.35 2.35 1.2 1.95 5.13 - 1.08 - - - -7.02 - - - - - -1.82 -2.16 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 4.77 - - 4.44 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.09 3.0 -0.58 0.92 3.42 2.07 -2.31 -2.23 -1.56 -1.48 -1.13 -2.05 -0.9 2.79 - - -2.68 -0.9 - -0.59 -0.95 0.52 -1.17 -2.2 - -0.25 -0.91 -1.6 -0.43 -2.48 -0.9 -0.8 -0.57 -2.2 -1.39 -0.71 -2.6 -2.95 -1.9 -2.82 -2.45 -3.59 -3.04 -0.2 -1.56 -0.64 -2.83 - -0.94
-2.85 1.33 -1.64 -2.52 4.52 -0.06 0.06 -0.28 - 2.09 -0.77 -1.55 -1.24 1.32 - - - -5.31 - -3.46 -0.77 -2.1 -0.16 -3.25 -0.34 -2.38 - -0.25 - - -0.97 -0.42 -0.69 - -1.63 0.33 -0.07 -1.29 -1.77 -2.94 -2.54 -2.27 -2.79 -1.1 -2.93 -1.17 0.11 -2.17 -3.6
0.87 2.81 -0.61 0.25 3.65 2.57 -0.02 0.17 -1.0 -2.62 -0.43 - -0.73 0.23 0.27 - -3.0 -2.07 1.65 -0.44 - - - -4.91 0.83 0.15 0.45 - - - - -2.32 - -1.37 - - - - - -4.98 -5.03 - - -0.36 0.41 -0.16 -1.09 -0.6 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.