Heatmap: Cluster_364 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
Smo137695 (PACid_15421550)
0.48 -0.48 -0.84 0.23 0.84 0.89 0.05 -0.03 0.31 -0.52 -0.1 0.33 -2.34 -1.12 -1.58 -2.74 -0.36 0.34 -0.77 -3.57 - - -0.5 -0.65 - 1.25 1.42 2.37 -0.57 -0.65 -0.9 0.15
Smo137752 (PACid_15422230)
0.48 -0.48 -0.84 0.23 0.84 0.89 0.05 -0.03 0.31 -0.52 -0.1 0.33 -2.34 -1.12 -1.58 -2.74 -0.36 0.34 -0.77 -3.57 - - -0.5 -0.65 - 1.25 1.42 2.37 -0.57 -0.65 -0.9 0.15

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.