Heatmap: Cluster_337 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
Smo413363 (PACid_15413825)
-0.17 0.08 -0.22 0.0 -0.03 0.1 0.12 -0.13 -0.12 0.08 -0.01 -0.35 0.32 0.73 0.19 0.33 -0.08 -1.09 0.38 0.36 -1.22 0.76 -0.29 0.33 -0.38 0.62 0.13 0.04 -0.61 -0.43 -0.8 -1.05
Smo75872 (PACid_15415959)
-0.01 -0.03 -0.04 -0.01 0.31 0.25 0.11 0.13 -0.01 -0.14 -0.11 -0.24 -0.01 -0.02 0.45 0.37 -0.3 -0.35 0.17 -0.34 -0.66 0.29 0.03 0.07 -0.1 0.34 0.32 0.23 -0.18 -0.21 -0.53 -0.62

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.