Heatmap: Cluster_174 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots (apex), 7 DAG
Roots (differentation zone), 4 DAP
Roots (elongation zone), 4 DAP
Roots (meristematic zone), 4 DAP
Roots (stele cells), 7 DAS
Roots (tip)
Leaves (rosette), 21 DAG
Leaves (rosette), 29 DAG
Leaves (rosette), 35 DAG
Leaves (rosette), 42 DAG
Leaves (rosette), 57 DAG
Epidermis cells
Mature guard cells
Stems (internode)
Stems (internode), senescent
Meristem (M1-3), 7-9 DAG
Meristem (M4-6), 1-12 DAG
Meristem (M7-1), 13-16 DAG
Axis of the inflorescence
Pedicel
Flowers (receptacles)
Flowers (floral buds)
Flowers (sepals)
Flowers (petals)
Flowers (stamen filaments)
Flowers (anthers)
Flowers (carpels)
Flowers (ovules)
Stigmatic tissues
Pollen
Siliques
Siliques, senescent
Pods of Siliques
Pods of Siliques, senescent
Embryo
Endosperm
Seeds, dry
Seeds, from senescent siliques
Seeds, young
Seeds, germinating
Seedlings, 5 DAG
Seedlings, 11 DAG
Seedlings, 14 DAG
Seedlings, etiolated
-4.73 - -3.94 -3.74 - -2.94 - - -8.78 - -8.78 - - - -7.29 -5.83 -6.47 -5.41 - - - - -8.13 - - -5.98 -8.06 -6.13 - -4.41 -2.12 3.59 -2.83 -4.76 2.03 -3.89 2.95 3.21 -6.32 3.1 -2.78 -6.14 -4.21 0.21
-3.73 -5.49 -2.96 -1.75 - -5.31 - - - - - - - - - -4.83 -2.12 1.52 - - -3.51 -4.63 -7.34 -7.42 -4.38 -5.73 -3.64 -4.45 - - -1.4 2.54 -2.59 - 2.27 0.37 - -0.82 -5.17 4.33 -3.5 - 0.92 2.26
-3.25 - -4.63 -2.98 - -4.43 -1.75 -4.21 -1.12 -2.06 -1.8 - - -2.67 -2.42 -6.36 -1.56 -3.75 -1.03 -2.46 -2.11 1.31 -3.91 1.08 0.44 -5.28 2.5 3.74 0.44 - 0.68 -6.23 -1.81 -3.17 -1.34 0.41 -6.61 - 2.39 2.15 -4.66 -2.35 -1.23 -2.24
- - - - - - - - 1.28 2.88 1.79 - - - - - - - - - - - - - - - - - - - - - - - - - - 2.96 - 4.52 - - - -
- - - 3.79 - 2.33 - - - - - - - - - - - - - - - - - - - - -0.54 - - - -1.19 - - - - 2.19 - - - 4.28 - - - -
AT1G25310 (MEE8)
- - -1.63 - - - - - - - - - - - - - - -6.93 - - - - - - - -5.97 -6.84 - - - -8.83 3.06 - - - -4.41 4.25 2.83 - 3.18 - - -5.83 -4.93
- - -1.13 - - -3.78 -0.66 - -6.16 - - - - -1.12 - -2.65 -4.11 -2.24 -3.49 - -3.97 -0.49 0.03 - -0.81 -1.15 -4.88 -4.53 -0.91 -3.36 0.84 2.47 2.73 1.04 - - 1.29 2.36 -5.36 3.72 -1.7 -0.53 -4.78 -1.19
- - - - - - - - 1.76 -0.17 -1.68 - - - - - - - - - - - - - - - - - - - 0.96 -0.24 -1.06 - 3.87 - - 2.52 -1.54 3.94 - - - -
AT1G43780 (scpl44)
- - - - - - - - - - - - - -7.49 - - - -10.78 -7.47 - - - - - - -5.79 -12.06 - - - -6.35 -4.6 -6.74 -5.42 -4.63 - - -4.4 - 5.45 -4.47 - -6.75 -3.41
-0.71 -1.47 -2.49 0.63 -1.16 -0.8 -5.59 -5.51 -4.25 -5.37 -5.78 -7.24 - -4.74 -1.31 0.48 1.4 1.66 -2.67 -4.93 -4.53 -3.3 -2.99 -6.46 -6.34 -3.23 -0.3 -2.96 -6.39 - 0.75 1.15 -0.9 -5.43 3.17 1.77 0.12 1.19 -3.64 3.36 -4.35 -3.34 -3.53 -2.92
AT1G58330 (ZW2)
- - - - - - - - - - - - - -0.75 - 3.11 3.17 1.37 -0.73 -0.95 - - - - 1.08 - - - - - -2.16 -1.85 -0.77 - -1.6 - - - -2.12 3.83 -1.66 - 1.69 -0.79
AT1G60090 (BGLU4)
- - - - - - - - - - - - - -6.45 - - - -8.76 - - - - - - - - - - - - -8.49 -1.87 -7.53 -4.43 - - - -1.47 -7.81 5.34 -3.18 - -6.72 1.47
AT1G61800 (GPT2)
-8.62 -5.84 -6.52 - - -6.79 -0.68 0.12 1.29 2.08 3.2 - - -6.13 -0.0 -6.73 -7.48 -6.69 -2.59 -1.21 -1.22 -3.52 -3.43 - -6.16 -3.73 -2.2 -3.4 -7.39 - 1.33 0.02 -0.66 1.89 0.84 2.3 -1.59 -2.47 -0.48 2.46 -1.58 -2.92 -0.24 0.15
-2.33 -1.37 -1.75 0.37 -0.1 -0.57 -2.22 -2.89 -1.2 -1.33 -1.55 -4.34 - -3.31 -2.46 -0.28 -0.09 0.37 0.02 -0.42 -1.11 -0.14 -0.99 -2.29 -3.18 -0.26 1.62 1.68 -0.65 -6.34 -1.15 1.91 -1.93 -3.66 1.75 -0.33 2.56 2.23 0.7 0.64 -2.12 -1.5 -1.43 -2.4
-7.03 - -1.29 -1.65 - -5.01 -5.6 -6.02 -7.91 - - -3.46 - -5.53 -4.49 -6.14 - - - - - - - - - -7.05 - - - -4.74 -9.16 3.65 -6.37 -3.64 - - 1.77 4.38 - 2.41 -1.29 -3.82 -1.75 -5.65
- - -3.01 - - - - - - - - - - -6.02 - - - - - - - - - - - - -1.91 -5.03 - - -1.91 1.62 -2.43 -6.19 - -3.08 2.47 0.78 -5.9 5.01 - - - -1.12
AT2G26040 (PYL2)
-0.81 -0.86 1.14 1.37 - 0.53 -1.71 -3.87 -2.78 -2.42 -4.29 -1.17 1.8 -2.85 -5.98 -0.3 -0.28 0.06 -4.85 -3.92 -3.37 -6.64 -1.92 -1.58 -1.03 -3.61 -4.05 -4.5 -7.73 - -1.94 1.57 -3.12 -3.72 2.36 -3.05 -0.46 -0.27 -4.41 3.7 -0.1 -1.35 0.24 0.9
-2.76 -5.86 -4.82 -2.01 - -2.96 -0.71 -4.14 -2.58 -2.01 -1.91 -5.67 -1.58 -1.24 -0.49 0.34 1.58 1.41 -3.51 -2.64 0.35 0.26 -0.8 -6.7 -3.65 0.18 2.17 2.1 1.46 -7.11 1.2 -3.52 1.13 -0.47 1.18 1.37 -10.01 -6.59 1.71 0.22 0.33 -1.2 -2.29 0.13
AT2G27300 (NTL8)
-1.14 -1.05 -5.52 - - - -0.95 -2.32 -3.82 -3.05 -3.92 - - 1.74 -0.95 -0.17 -0.92 -1.57 -1.19 -0.39 0.47 0.45 0.51 1.39 0.76 -2.7 -0.92 -0.22 -1.69 - -0.23 -1.3 -0.43 -0.7 - -4.81 - -3.05 0.43 4.22 -0.77 -0.59 -0.89 -1.21
AT2G30970 (ASP1)
0.57 0.01 0.79 0.56 1.57 1.05 0.56 -1.39 -1.13 -1.12 -1.02 -2.92 -2.85 -0.36 -1.37 -0.26 -0.63 -0.66 -0.1 -0.32 -0.12 -0.61 -0.08 -0.16 0.66 -1.04 -0.6 -0.8 0.37 -4.04 -0.12 -2.09 -0.32 -0.06 0.78 0.22 -4.83 -2.81 -0.25 2.83 -0.7 -1.04 -0.78 0.04
-4.54 - -3.75 - - - - - - - -6.24 - - - 1.09 - -4.61 - -3.26 - - - - - - -2.88 -8.24 -4.65 - - -5.78 -2.86 - -3.23 - -2.17 1.05 -0.23 -2.87 5.17 0.27 - - -0.71
AT2G40220 (ABI4)
- - -6.64 - - - - - - - - - - -6.49 -6.41 -8.44 - - - - -8.27 - -5.18 - - -6.46 -6.3 -3.92 - - -1.12 2.16 -2.46 -6.65 3.65 -1.18 -1.33 0.75 -3.68 4.5 - - - -0.13
-2.51 -1.74 - - - - -1.53 -4.3 - - - - - -0.61 -2.51 -0.95 -0.15 0.38 - -1.47 -4.05 1.88 -2.03 1.38 -3.1 1.98 -1.36 -2.61 - - -1.13 -1.25 -1.07 - 0.13 -3.13 - - -1.57 4.3 -0.69 -1.62 1.13 1.2
- - - - - - - - - - - - - - - - - - - - - - - - - - 2.71 - - - - - - - - - - - - 5.23 - - - -
AT3G48700 (CXE13)
-4.73 -0.56 -2.62 1.57 - 1.25 -5.52 -7.57 -7.63 -7.53 -8.01 -1.62 - - -5.35 -1.13 -0.46 -0.86 -2.71 -5.58 -4.23 -2.27 -4.97 -6.51 - -2.68 -0.56 0.58 -1.09 -3.95 -2.06 -2.45 -3.19 -5.53 0.33 0.4 -6.86 -4.16 -1.27 4.43 0.32 -1.87 -0.34 2.26
-7.61 -6.8 -4.28 -5.22 - -8.43 -7.15 -6.99 -5.2 -5.87 -6.09 - - 0.74 -1.06 -1.89 -1.76 0.61 -2.88 -3.58 -1.73 -2.25 -4.24 -1.94 -5.55 -3.64 -0.62 -1.63 -1.9 - -1.13 4.46 -3.41 -5.41 -2.95 -0.9 -0.34 2.54 -2.03 2.51 -3.92 -6.68 -2.57 0.31
-3.99 -8.03 -7.82 -6.1 - -7.03 -5.68 -6.76 -6.06 -6.47 -5.95 - - -0.28 -2.48 -0.45 1.47 2.75 -1.36 -2.05 -1.09 -2.27 -3.8 -2.69 -4.73 -2.57 -0.15 -1.4 -2.14 - -0.55 3.77 -2.11 -5.36 -0.07 0.41 -3.31 1.13 -1.72 2.6 -2.27 -2.46 -0.22 1.33
-5.56 -5.75 -1.76 -2.24 - -8.97 - - -8.37 -9.9 -8.87 - - -6.61 -5.94 -7.89 -10.79 -8.9 -4.17 -6.04 - - -9.21 -8.4 - -9.78 -7.58 - -8.47 -8.05 -4.71 4.16 -5.3 -5.41 -0.51 -3.8 3.55 3.09 -9.56 2.07 -4.44 -6.22 -6.15 -3.68
AT4G11140 (CRF1)
-0.83 -3.24 -1.48 -0.08 - -1.19 -1.58 -5.02 -5.33 -5.18 -6.72 - - -3.76 -5.6 0.14 -0.09 0.63 0.27 -0.07 -1.74 -0.21 0.57 2.16 1.87 -2.98 -0.14 -1.31 -2.26 - -1.23 2.72 -1.97 -0.96 1.48 -1.93 1.28 1.2 -2.77 2.48 -0.68 -1.78 -1.29 -1.79
-4.34 -0.93 -0.72 - - - - -6.08 -6.04 -6.14 -0.19 -3.3 - - -2.71 - - - - - - - - - - - - - - - -3.9 -0.35 - -3.54 0.81 -2.03 - -0.47 -5.77 5.24 - - - -3.39
- - -1.79 - - - - -0.21 -1.65 - -2.09 - - - -1.56 - - - - - - - - - - - - - - - - 3.83 - - - - 4.0 2.4 - 2.61 - - -1.91 -3.52
-4.76 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -6.89 3.9 -5.29 -2.72 -0.85 -3.8 0.04 4.49 - 2.16 - - -5.07 -2.02
AT4G21380 (RK3)
-5.35 -2.86 -7.5 - - -5.66 1.14 -3.3 0.0 1.2 1.29 -7.34 - 0.1 0.12 0.86 2.24 2.23 2.49 2.02 0.14 -0.15 1.02 -7.49 - -1.09 -2.72 -4.26 -3.22 - 0.2 -4.6 -0.48 -2.34 -0.3 1.44 - - -3.73 -2.67 -1.96 0.33 -1.31 -3.51
AT4G21490 (NDB3)
-5.87 -4.76 -2.35 -4.38 4.74 -3.63 -8.46 -6.43 -4.41 -3.31 -3.8 - - -7.96 -6.98 -8.57 -11.04 - -5.35 -8.4 -6.62 0.94 -4.31 -8.02 -6.03 0.31 -5.42 -2.91 -7.01 -2.67 -5.43 -5.48 -5.24 -2.01 - -4.8 -8.42 -6.96 -3.25 3.49 -0.9 - -5.62 -0.27
AT4G23010 (UTR2)
0.09 1.4 0.58 -0.32 - 0.16 -1.79 -0.61 1.65 1.85 1.28 -1.57 2.37 -2.45 0.31 -1.47 -2.04 -3.62 -3.92 -3.95 0.32 -1.13 -1.53 -3.05 -2.53 -2.57 -0.14 1.8 1.15 -9.25 -0.68 -2.09 -1.15 0.67 -0.75 0.92 -2.91 -2.76 0.86 -0.41 -1.23 -2.18 -0.96 -1.06
-2.77 -2.07 -1.87 -2.69 0.35 -2.49 -6.05 -3.49 -2.5 -1.59 -2.62 -0.96 -3.39 -0.63 -0.64 -3.87 -1.7 1.4 -1.61 -2.38 -3.5 -3.02 0.54 0.87 -2.8 -3.76 0.22 -0.81 -4.8 - -2.0 3.73 -2.66 -1.57 0.64 1.14 1.51 1.47 -1.33 2.02 -2.39 -4.76 -0.77 0.49
AT4G24150 (GRF8)
-5.55 - -2.43 - - - - -6.53 -3.67 -2.27 -2.51 -6.16 -6.57 -4.96 -1.53 -4.74 -4.94 -0.72 -1.05 -2.24 -1.09 -1.15 -0.59 -5.78 - -1.56 1.91 2.58 -2.71 - -0.08 2.47 -1.67 -2.28 0.32 1.01 1.81 2.27 1.94 2.74 -4.95 -5.39 -2.86 -1.41
-1.65 -2.6 -0.98 -0.09 - -0.78 - - - -8.32 - -5.42 - - - -1.29 -1.37 0.07 -2.9 -4.5 -1.35 -2.03 1.39 -4.77 -0.67 -4.25 0.65 1.2 -2.75 - 1.03 1.89 2.03 -1.01 1.35 -0.39 1.44 1.96 1.38 2.97 -3.6 -3.65 -3.44 -1.04
-2.83 - -2.65 - - -3.76 -1.45 1.35 -5.24 -6.93 - - - -1.26 - -1.62 -1.64 -1.19 -3.62 -4.07 -2.48 0.02 0.48 -0.45 1.2 -4.45 -1.34 0.19 -6.3 - -0.69 -2.26 -0.24 - -2.91 - - - -0.35 4.51 0.1 0.29 1.5 0.4
AT4G36910 (LEJ2)
-1.82 -2.46 -1.17 -0.57 -4.87 -1.13 -0.61 -2.64 -2.85 -4.21 -3.85 -3.75 -2.45 -1.21 -2.41 -0.25 -0.47 0.21 0.23 0.61 -0.37 0.75 0.63 0.49 0.24 -1.42 0.34 -0.1 0.57 -8.17 -0.29 1.84 -0.41 -3.15 1.47 -1.75 1.9 2.06 -0.57 1.92 -0.61 -0.02 -1.03 0.16
AT5G05290 (EXP2)
- - - - - - - -11.38 - - - - - -5.68 -9.85 - -10.23 - -6.06 -8.38 -9.62 -8.66 -9.04 - - - -11.68 - - - -6.43 -2.31 -5.99 -8.17 - - -10.16 -3.79 - 5.39 -0.08 - -5.09 -0.3
- - -2.77 - - - - - - - - - - - - - - - - - - - - - - - - - - - -5.22 2.14 -7.19 -4.12 - -0.74 1.58 1.94 -7.41 4.85 0.48 -5.11 -3.18 0.67
-1.87 -3.95 -1.63 0.08 - -1.32 -0.88 -0.74 -1.44 -1.73 -2.03 -3.56 -7.01 -0.37 -3.99 -0.09 -0.4 0.41 0.39 -0.46 -1.02 -0.94 -0.27 -2.39 -3.03 -3.65 0.55 -1.38 -0.98 - -0.04 -0.4 -0.87 -2.6 2.51 -0.18 -3.35 -1.02 -2.07 4.07 -1.24 -0.7 -0.26 -0.62
-0.41 -1.34 -0.25 0.28 0.03 0.59 -0.44 -3.01 -1.03 -0.85 -0.76 - - -2.06 -1.84 0.33 -0.57 -0.42 0.11 -0.02 -0.45 -0.28 -0.54 0.77 -0.14 -3.5 -0.78 0.17 -0.09 -7.97 0.27 0.39 -0.27 -1.21 0.75 0.81 0.17 0.82 1.2 3.03 -1.73 -0.46 -0.33 -0.93
AT5G42890 (SCP2)
-0.99 0.11 0.3 -0.78 -1.66 -0.46 -2.04 -2.41 -2.51 -1.98 -1.87 -6.19 -6.24 -0.38 -0.72 -0.7 -0.55 -0.6 -0.46 -0.62 0.36 -1.13 0.09 0.73 0.98 -0.03 -0.52 0.23 1.29 -4.52 -0.02 0.85 -0.48 0.69 -1.6 -0.58 0.15 0.97 0.17 3.33 -2.4 -3.03 -1.99 0.01
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.38 - - - 1.28
-1.06 -0.53 -0.87 -1.58 -3.3 -1.34 0.92 -0.38 0.12 0.24 0.43 -2.99 -0.63 -0.13 0.61 -0.98 -1.53 -1.19 -0.29 0.01 -0.06 -0.01 0.26 -0.23 -0.34 -2.32 -0.46 -1.1 0.4 - -0.05 -0.68 0.31 0.43 -1.76 -0.76 -1.86 -0.59 -0.78 3.37 -0.5 0.66 -0.61 0.58
AT5G57390 (EMK)
-2.71 -0.54 -2.43 -0.81 - -4.88 -2.72 -4.75 -3.24 -5.4 -4.5 -7.35 -6.12 -1.37 -5.47 0.25 0.16 -0.15 -0.93 -1.83 -1.88 -1.81 -2.77 -6.33 -6.31 -6.17 0.75 -0.39 -2.27 - -1.39 2.62 -2.35 -5.53 3.5 -1.95 1.79 2.17 -2.54 2.69 -1.77 -3.06 -1.45 -1.01
-2.69 -0.95 -2.39 -1.54 - -2.79 -1.16 -0.28 -0.95 -0.95 0.27 -1.98 -0.31 -2.42 -2.89 -3.13 -3.43 -2.55 -1.81 -1.34 0.29 0.63 -1.02 -2.17 -1.97 0.96 -0.82 0.23 -1.39 1.24 1.06 0.21 1.24 1.76 1.9 2.74 0.15 -0.2 -0.24 -0.91 -0.22 0.31 0.31 -1.25
AT5G65070 (FCL4)
-2.42 -1.71 -0.84 -2.79 - -0.84 -3.1 -1.08 -1.0 -1.0 -1.61 - -0.75 0.19 -0.57 -0.53 0.25 0.72 -0.63 -1.61 0.47 -1.34 -2.85 -0.56 -0.43 -1.32 -0.39 -0.73 -4.19 -5.88 -1.01 2.0 -1.41 -0.53 -5.79 -1.69 3.06 2.38 -0.66 2.05 -0.94 0.47 0.67 -0.88
- - 0.7 - - -4.2 - -5.38 - - -5.12 - - - -1.48 - - - - - - - - - -3.65 -4.89 - - - - -8.46 -2.4 - - -2.15 -2.08 -2.78 -3.87 - 5.1 -0.26 - - 2.51

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.