Heatmap: Cluster_53 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
- 4.52 -0.2 - - -0.57 - - - 2.37 2.8 - - 1.23 - - - - - -0.2 - - -2.5 - - - 0.05 - 2.81 - - -1.67 - - - - - - - - - - -1.69 -2.01 - - - - -
- 5.11 - - - - - - - - 3.86 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.28 1.67 0.98 - -0.77 1.98 -2.35 - -1.04 2.84 4.28 - - - - 2.63 - -5.93 - - - -4.1 -3.82 -1.77 1.15 - - - - - - 0.76 - - - - - - - - - - -1.78 - - - -0.42 - -
0.6 -0.77 2.18 -0.53 -1.01 1.49 1.24 1.84 -1.76 2.37 3.41 -3.43 0.99 0.52 - - -3.09 -0.15 0.78 -1.81 -2.71 -4.21 -2.98 -3.38 -1.78 -1.61 -2.26 -1.95 - -2.82 - -4.98 - - - -3.05 -2.95 - - -4.35 -4.67 -4.73 -3.96 0.73 1.2 0.94 -1.31 -0.23 -1.0
-5.16 -1.24 -3.15 - -2.86 - -2.91 -3.1 -4.63 5.04 3.64 -1.1 -2.47 -3.57 - - -4.99 -2.83 - -5.29 -5.46 -3.89 -4.57 -3.83 -1.28 - - -2.56 - - - -2.48 - -2.04 - - - - - -5.84 -5.01 - -4.09 -4.17 - -3.63 -2.68 - -
- 4.95 - - - 3.14 - - - - 2.97 - - - - - - - - - - - - 0.53 - - - - - - - - - - - - - - - - - - - - - - - - -
- 4.39 - - - 3.72 - - - - 2.01 - - - - - - - - - - - - - - - - - - - - 3.42 - - - - - - - - - - - - - - - - -
- 3.52 - - - - - - 2.66 4.59 2.83 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 4.22 - - - - - - - 3.68 4.13 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.51 3.13 - -2.12 - 3.17 -1.59 - 0.53 1.7 1.71 0.1 - - 1.8 - - -1.24 - -3.73 -0.02 -0.84 -2.16 -2.23 - - - 0.63 - 1.88 - -1.28 - - - 0.61 - - - -1.38 -1.04 -0.85 0.8 -1.55 - -0.0 0.34 1.25 -
1.84 2.52 - 1.71 - 2.95 - -0.54 0.4 -2.31 1.05 - 0.15 0.62 - - -1.31 -0.67 - 0.4 -4.27 -2.86 -0.96 -2.75 - - - - - - - - - - - - -0.06 - - -3.41 -1.83 - -2.52 2.11 -0.39 3.46 -0.08 - -
2.28 3.63 2.13 0.94 - 1.82 1.52 - - - 2.72 - 1.15 - - - -1.32 0.56 - 0.99 -0.45 - -1.32 - - - - - - - - 1.24 - - - - - - - 0.1 - -0.47 - 0.16 - - - - -
-1.4 3.6 - - - 3.82 - - - - 2.17 1.99 - 3.06 - - 1.41 - - - - - - - - - - - - - - 1.52 - - - - - - - - - - - - - - - - -
-3.3 1.45 1.14 - - - 0.37 - -0.17 3.87 4.54 - - -0.01 - - -1.83 - - -4.02 -4.28 - - -2.25 - - - - - - - -0.06 - - - - - - - - -3.94 - - -3.71 -0.67 -0.75 - - -
0.43 2.96 - - - 4.52 - - - 2.09 3.52 - - - - - 0.09 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
2.72 4.43 1.22 - - - -0.01 -1.59 - - 0.74 -0.52 - 3.07 - - - -1.02 - 1.18 -0.76 -1.08 -1.44 -0.05 - - - - - - - - - - - - - - - -2.11 - -0.8 - -1.08 - - - - -
1.08 3.53 3.94 - - - - - - - 1.72 1.98 - - - - 0.02 - - - - - - 0.2 - - - - - - - - - - - 3.4 - - - - - - - - - - - - -
2.17 4.3 -0.36 - - - 0.16 -1.42 - - 2.07 - - 0.79 - - -1.63 -2.74 - 0.47 - - - - - - - - - - - - - - - - - - - - - - 0.35 -2.11 1.59 - - 2.31 2.41
1.82 4.36 3.08 - - 0.83 -0.78 - 1.11 - 1.27 1.74 - 0.06 - - -0.36 -1.44 - -2.82 -0.18 -0.66 -0.9 -1.22 - - - - - - - - - - - - - - - -1.06 - -0.18 - - - - - - -
2.25 2.86 2.27 - - - -0.64 - 2.99 - 3.01 - - - 3.74 - - - - 1.08 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 3.9 -1.39 3.73 1.2 3.78 - - - - 1.02 - - -0.27 - - - -3.42 - -5.83 - - - -2.11 - - - - - - - 0.2 - - - - - - - - - - - -3.18 - - - - -
-0.06 2.66 - - 2.62 - 0.04 - 4.82 -0.2 0.77 - - - - - - - - - - - -0.85 0.26 - - - - - - - - - - - - - - - - - 0.62 - -1.03 - - - - -
-1.72 4.12 - - - - - 2.53 - - 1.88 - 3.47 - - - -0.36 - - 1.56 - - - - - - - - - - - - - - - - - - - - - - - 2.8 - - - - -
- 4.51 - - - 3.48 - - 2.36 - 3.06 - - - - - 0.67 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-3.07 1.25 - -1.3 3.75 - -1.35 -1.89 - 1.27 1.75 - - 4.69 - - - - - -6.95 -5.64 - - -3.3 - - - - - - - -2.1 - - - - - - - - - - - - - - - - -
0.75 3.14 0.45 - 0.23 2.77 - - 1.41 - 2.0 - - - - 1.61 - -0.08 3.72 -2.72 -3.11 - - -2.5 - - -0.29 - 1.45 - - - - - - - - - -0.8 - - - -3.91 -4.11 - -1.77 - - -1.52
0.2 2.56 - - -1.12 - -2.74 - 0.11 3.72 3.76 - - - - - -2.92 - - - - - - -1.74 - - - - - - - -1.43 - - - - - - - -1.48 - -2.45 - -0.84 2.15 1.43 1.19 1.1 -
0.81 0.67 -1.96 -3.03 - - - -4.0 0.19 - 1.1 -1.35 -1.66 -0.03 - - -0.83 0.8 4.9 -2.5 -4.23 -3.39 -4.13 -4.19 - -1.01 - - -1.25 - - - - - - - - - - - -5.27 - - -4.66 0.23 1.47 0.45 -0.77 -0.4
2.97 4.0 - - - 1.88 - - 4.19 - 1.14 - - - - - -0.95 - - - - - - - - - - - - - - - - - - - - - - -0.89 - - - - - - - - -
- 2.35 2.31 - 2.77 - - 0.18 1.36 3.39 2.78 - - - - - - - - - 0.68 - - - - - 3.07 - - - - - - - - - - - - - - - - 0.02 - - - - -
-1.41 4.28 - 1.54 - 2.95 - - 1.5 - 0.79 - - 2.55 - - 0.15 2.23 - - - 0.15 - 0.34 - - - - - - - - - - - - - - - - - - - - - - - - -
- 4.25 0.57 - 1.68 - 3.32 2.06 - - 1.36 - - 2.81 - - - - - - - - - - - - - - - - - 0.68 - - - - - - - - - - - - - - - - -
0.6 3.78 2.95 - - - 1.41 - - 1.51 2.68 - - 3.72 - - - - - - - - - - - - - - - - - -0.16 - - - - - - - - - - - - - - - - -
- 3.27 - - - - - - - - 3.22 4.91 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.65 4.3 - - - - - - 0.45 3.59 2.98 - - - - - - - - - - - - - - - - - - - - 0.6 - - - - - - - - - - - - 2.31 - - - -
0.7 4.01 0.0 3.5 0.57 3.15 -1.73 -1.72 - - 0.01 1.32 - 1.11 - - -1.86 -1.99 - -5.5 - - - - - - - - - - - - - - - - - - - - - - - - 0.87 - - - -
0.37 3.51 - 0.81 - - 0.93 -0.64 - 0.11 3.87 - 2.5 2.56 - - 1.15 0.29 - -0.64 - - - - - - - - - - - - - - - - - - - - - - - -0.52 - - - - -
1.12 4.16 - - - - 0.38 3.06 1.88 - 0.51 0.15 1.53 2.2 - - 0.74 1.65 - - - - - - - - - - - - - -0.31 - - - - - - - - - - - - - - - - -
- -0.1 - - - - - - - 5.1 3.38 1.63 - - - - - -1.99 - -4.01 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.08 4.33 1.39 - - 1.67 -0.73 - - -0.97 3.41 - - 2.83 - - - - - -4.46 - - -0.92 0.26 - - - - - - - 0.57 - - - - - - - - - - - - - - - - -
2.1 3.75 - 0.31 - -0.88 -0.71 -0.36 -1.35 -2.86 0.69 - - - - - 0.66 -0.51 - 1.29 -4.82 -1.74 -1.39 -0.62 - - - - - - - -0.44 - - - - -0.61 - - -3.97 -1.55 - -3.08 2.14 1.43 3.35 -0.63 - -
-0.11 5.43 - - - - - - - - 2.3 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 5.02 - - - 3.57 - - - - 0.95 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.49 - - - - - -
-1.09 3.12 - -0.21 4.7 1.83 - - - -1.29 3.19 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 5.29 - - - - - - - - 2.98 - - - - - - 0.94 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.48 4.24 - - - 2.8 - - - - 2.21 - - 3.05 - - - - - - - -0.56 - - - - - - - - - - - - - - - - - - - - - - 3.2 - - - -
1.65 1.49 2.55 - - 0.57 3.89 1.91 - -2.28 4.06 - - - - - - - - - - - - -2.04 - - - - - - - - - - - - - - - - - - - - - - - - -
-0.17 2.11 1.42 0.08 1.87 -0.8 1.07 -1.51 1.08 -0.99 1.07 -1.91 -0.57 -0.03 - - -0.69 -0.86 - -1.68 -0.77 -3.43 -2.58 -1.58 - 0.84 0.37 1.35 0.49 -0.47 -0.73 - - 0.06 - 0.55 - - 0.36 -1.93 -0.36 -0.16 -0.19 -0.49 - 0.16 1.63 -0.95 1.87
0.04 0.96 0.65 1.0 4.61 - - 0.14 2.42 - 2.66 - - 1.97 - - - - - - - -0.62 - - - - - - - - - - - - - - - - - - -0.44 - - - - - - - -
-13.42 - 1.63 - - -6.67 - - -9.33 3.36 4.51 -6.65 - - - - - -0.71 - -10.11 -1.7 -11.67 - -12.04 - -6.78 - - - 2.61 - -0.81 -11.6 -12.79 2.28 -14.87 - - -6.03 -11.21 -1.5 -13.22 -10.19 - - - - - -
- 4.41 - - - - 0.74 2.42 2.18 - 2.45 - - 3.3 - - - - - -0.03 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.64 0.82 -1.02 - - 2.46 0.89 1.17 -0.02 2.31 1.87 0.29 2.03 1.06 - - 0.25 0.95 - -1.5 -0.77 -2.69 -2.79 -2.15 0.76 - - 0.75 -0.85 - -1.35 -0.09 -1.38 - 0.85 1.15 -0.31 0.09 -0.61 -3.26 -5.34 -1.33 -0.89 0.38 - - -1.54 - -
- 1.49 - - 2.31 3.41 - - - 2.92 3.98 - - - - - -0.09 - - - - - - - 2.64 - - - - - - - - - - - - - - - - - - -2.93 - - - - -
-3.11 4.18 - - - 3.83 - - 1.98 - 2.04 - 2.63 - - - - -1.67 - 0.15 - - -2.03 - - - - - - - - - - - - - - - - -2.08 -2.11 - - -2.2 - - - - -
-0.37 2.29 1.8 - - - 2.2 -0.67 0.99 - 1.85 - - 4.6 - - -0.87 -2.94 - -2.14 - - - - - - - - - 1.79 - - - - - - - - - - - - - -1.02 - - - - -
-1.4 1.73 2.79 1.48 2.17 0.86 0.28 -2.3 -1.16 1.45 1.99 -0.71 - -0.1 2.07 - - -0.7 - - -3.36 - -0.79 - - - - - - - - - 1.16 1.32 - - - - 2.43 -1.79 - -1.84 -0.12 - 1.03 - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.