Heatmap: Cluster_114 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
-2.0 4.6 - - 0.34 - - - - - -1.1 - - 1.94 - - - -2.66 - -3.99 - - - - - - - - - - - - - - - - - - - - - - - 0.04 3.7 2.23 - - -
-6.48 -0.92 -6.31 -9.0 - -7.46 -6.86 -9.85 -7.59 -9.1 0.72 -0.94 - -5.83 - - -2.83 -0.31 - -9.54 - - -10.05 - -5.36 - - -6.41 -5.69 - -5.56 -7.56 -6.59 - - -6.67 - - - -9.15 - -5.28 - -2.31 4.61 3.37 1.57 2.32 1.15
- 4.34 - - - - - - - - - - - - - - - - - - - -0.2 - - - - - - - - - 1.96 - - - - - - - - - - - - 3.57 3.59 - - -
-1.49 3.99 -0.96 2.22 - 0.44 -1.17 - -0.71 -2.41 -0.6 - - -0.33 - - -0.84 -3.33 - - - - - - 2.33 - - - - - - 0.13 - - - - - - - - - - - - 3.85 1.21 - - -
-2.7 4.16 - - -0.02 2.64 - - - - - 0.8 - - - - - - - - - -1.72 - - - - - - - - - 1.92 - - - - - - - - - - - - 3.97 1.18 - - -
1.12 3.36 - - - - -0.27 -0.18 1.06 -1.51 -2.04 - - - - - - 0.67 - - - - - - - - - - - - - - - - - - - - - -1.81 - -2.42 - 2.7 3.5 3.23 - - 1.55
- 4.46 - - - - - - - - 0.21 - 2.37 - - - - - - 0.23 - - - -0.27 - - - - - - - - - - - - - - - - - - - -0.69 2.92 3.38 - - -
-0.42 3.25 -2.17 -3.25 - - -3.03 -2.04 0.09 0.17 -0.1 -1.07 - -1.44 - - 0.02 -3.68 - -1.78 -4.65 -4.66 -2.83 -4.95 1.29 - - - - -0.92 - -0.17 - 1.2 - - - - - -3.66 -3.66 - - 0.64 3.63 0.57 1.78 -0.98 2.75
1.56 3.96 - - 0.01 - - - - - -0.97 - - - - - - - - -4.33 - - - - - - - - - - - - - - - - - - - -0.93 0.3 - - 1.92 4.55 - - - -
-2.33 3.72 - - - - - -1.72 0.76 - -2.09 - 0.65 0.48 2.66 - - 0.76 - -1.32 - - -2.72 -0.82 - 1.09 - - - 1.74 - -0.42 - 2.02 - - - - - -0.7 -0.44 - - 0.12 3.11 - - - -
-7.55 3.91 -0.78 - - - - 0.81 - -1.4 1.04 - - - - - - -1.51 - -1.5 - - - - - - - - - - - - - - - - - - - - - - - 4.36 3.0 - - - -
- 1.94 2.82 - - - - - - - 2.09 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.08 - - - -
-4.06 3.51 - - - - - - -0.17 - - 0.19 - -0.6 - - - -1.65 - - -3.28 - - - - - - - - - - - - - - - - - - - - - - 2.48 4.69 1.57 - - -
-2.37 3.28 - - - - - - -0.49 - - - -0.54 - - - - - - - - - - - - 0.18 - - - - - 0.87 - - - - - - - - - -0.96 -2.23 - 4.54 3.42 - - -
-2.88 3.28 - - - - - - - - -0.95 -0.09 - - - 3.23 - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.95 4.32 2.17 - - -
-0.38 3.12 - - - - - - 1.06 - -3.11 - - 0.46 - - - - - - - - - - - 2.66 - - - - - - - - - - - - - - - - - - 4.89 - - - -
1.52 4.05 - - - - - - - - -2.38 -0.12 - -0.64 - - -2.67 - - -2.25 - - - - 2.02 - - - - - - -1.17 - - - - - - - - - - - 1.53 3.62 1.46 1.27 1.35 -
0.66 3.52 - - - - -2.55 0.01 - 1.11 -0.55 - - - - - - -4.08 - -2.87 -1.62 -0.43 - -3.05 - 0.27 0.39 - - - - - 0.6 - - 0.57 - - - -1.27 -2.12 - 0.54 2.04 3.58 2.78 - - -
-1.72 1.59 -0.57 -5.05 -3.35 -0.99 1.6 0.21 -1.31 -1.99 -1.31 -0.3 2.19 2.38 -1.62 -2.57 -1.99 0.54 1.43 -0.87 -4.54 -6.99 -5.19 -3.91 - -4.54 -2.16 -5.09 -3.19 -5.34 -3.77 -1.42 -5.28 -2.88 -4.99 -3.03 - -5.55 -3.41 -3.38 -5.63 -2.09 -3.39 0.49 3.58 2.64 -1.22 -0.58 -0.99
- 1.32 - - - - - - - - - - - 2.69 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.8 4.46 4.03 - - -
-1.0 3.64 -1.0 - - - - - -1.25 - 1.06 0.26 - - - - -1.7 - - - - - - - - - - - - - - -1.21 - - - - - - - -3.17 - - -1.69 2.79 4.33 - 1.24 - 0.31
0.07 4.71 - - - 3.71 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.12 - - - -
-3.11 0.3 - - - - - - - - -5.45 3.74 1.4 - 1.84 - - - - -0.35 - -3.14 - -1.08 - - - - - - - -1.19 - - - - - - - - - - - 1.04 4.07 2.64 - 0.24 -
-2.81 1.47 -3.13 -4.3 - -2.59 -5.43 -2.57 -4.2 -5.71 -4.55 3.45 - 0.44 -1.13 - -3.99 -1.3 - -3.6 - -5.28 -5.7 -2.75 - 0.72 -0.81 - - - - -0.23 - - - - - - - - - - - -2.31 4.41 2.87 -2.54 - -
-4.06 3.22 - - - 0.16 - - 1.85 - -4.14 -1.37 - -0.6 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -1.12 4.66 2.45 - 1.39 -
0.02 4.14 - - - - - - 1.81 - -4.9 - - - - - - - - -0.17 - - -2.34 - - - - - - - - - - - - - - - - -2.19 -2.7 -1.65 -1.7 -1.03 4.45 1.3 - - -
-0.81 3.4 0.91 - - 1.14 - - -0.01 - -1.46 - - - - - - -2.36 - - - - - - - - - - - - - - - - - - - - - -0.18 0.21 - - 3.02 2.54 - 3.47 2.36 -
- 3.97 -1.28 - - - - - - - -0.75 - 0.4 - - - - 0.76 - -1.26 - - - -2.57 - - - - - - - - - - - - - - - -2.45 - - -1.54 1.7 4.04 3.08 - - -
0.72 3.22 - 1.84 1.39 2.95 2.71 1.33 -1.57 -3.29 -2.73 0.98 0.01 -1.22 - - -0.37 -3.51 - -2.43 -1.71 -2.78 - -1.19 - - - - - - - -0.75 - - - - - - - - - -2.66 - 1.27 1.88 1.19 - - -
-0.03 4.48 - - - - - - - - - - - - - - - - - - - -0.43 -0.08 - - - - - - - - - - - - - - - - - - - - - 4.58 - - - -
-2.22 -0.37 -3.99 -2.98 -4.98 -3.18 -1.16 -1.94 -5.78 -1.82 0.76 -0.21 -3.82 -0.58 2.24 3.43 1.45 -4.76 - -4.69 -3.27 - -4.76 - -2.43 - -3.94 -3.71 -2.14 - - - - - -2.64 -2.13 - -3.94 - -3.69 -3.88 -3.06 -2.49 -0.62 4.12 -1.28 0.32 1.52 -0.2
0.43 3.46 - 0.92 -1.82 -0.32 1.54 1.35 - - -0.49 0.26 - 2.02 - - - -1.93 2.3 0.24 -3.18 - - - - - 0.88 - - - - -1.34 - - - - - - - - - - - 0.74 2.81 0.56 - 0.06 1.23
0.11 3.69 - - - - - -0.73 - - - - - - - - -0.92 -0.04 - - - - - -0.89 - - - - - - - 0.57 - - - 2.46 - 3.25 - - - - - - 2.23 1.41 - - 3.09
- 3.53 - - - - - - - - -0.46 - - - - - - -3.33 - - - - - - - - - - - - - - - - - - - - - - - - - -2.63 4.48 3.39 - - 1.89
0.99 3.53 -1.19 1.51 -0.47 3.55 - -1.78 - - -1.41 - 0.69 - - - -0.66 -0.39 - 0.23 -3.43 -3.53 - -1.1 - 1.74 - - - - - - - - - - - - - -3.44 -1.15 - - 0.34 2.9 0.76 - - -
-0.33 2.35 -1.65 -3.01 - -1.41 -1.14 -3.01 -2.75 -4.26 -1.86 - - 4.21 - - -2.58 -1.54 - - - - - - - - - - - - - - - - - - - - - - - - - -0.26 4.24 -1.44 1.09 - -
1.22 3.36 - - - - - - - - -4.4 0.73 - - - - - - - -2.95 - -0.87 - 2.2 - 2.01 - - - - - - - - - - - - - -2.22 -1.66 -1.68 - - 4.32 2.21 - - -
-2.65 1.33 0.56 - -2.48 -1.03 1.21 0.8 -2.34 - -3.26 -3.17 -2.41 - - - - - - -5.77 - - - -4.78 - - - - - - - -1.47 - - - - - - - - - - - -4.81 5.26 -0.37 - - -
-4.39 -0.14 - - - - - -6.48 -2.27 - -3.13 -0.06 -1.84 -1.74 -2.1 - -3.29 -5.37 -0.41 -1.54 - -2.89 -2.9 -5.23 -1.98 -3.62 -3.49 - - - - -3.18 - - - - - - - - -6.64 - - 0.71 5.08 3.06 -3.37 - -
-6.66 0.51 -4.34 -2.86 -3.34 1.83 0.1 1.06 -5.34 -2.91 -4.57 -2.72 -0.14 2.06 - - -7.06 -1.52 - -1.43 -0.27 -7.62 -2.35 -7.81 -2.62 -4.17 -1.21 -0.46 0.07 -0.76 -1.37 0.54 -0.48 -0.74 -0.78 0.27 -0.47 -0.06 -0.6 -1.2 -0.21 0.07 0.96 2.04 3.17 2.49 - - -
-2.72 4.11 - - - 1.5 - - 1.31 - -1.68 - - - - 1.72 - - - -4.4 - - - -2.68 - - - - - - - - - - - - - - - - - - - -0.07 3.69 3.11 - - -
0.14 1.7 - 0.24 - - - -0.76 0.65 1.0 2.09 3.56 - - - - - - - -1.76 - - - -1.31 - - - - - - - - - - - - - - - - - - - - 4.49 - - - -
0.22 3.77 0.49 - - - -2.65 0.03 - -0.67 0.05 - 1.49 2.22 - - 0.75 -0.91 - -1.87 - - - - - 0.21 0.45 - - 0.82 - - - - - 0.55 - - - - -2.08 - -0.38 -1.05 2.77 2.56 - - -
-2.65 3.75 - - - -0.47 -0.29 -3.35 - - -5.67 - - -0.32 - - - - - - - - -3.34 - - 2.75 - - - - - -1.05 - - - - - - - - - - - 2.13 4.13 1.87 - - -
0.14 3.86 - -1.94 - 4.14 - - - - -1.4 -0.44 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.84 - - - -
-0.74 3.25 - - - 2.02 - - - - -1.24 2.07 1.72 1.25 - - 0.19 - - -0.52 - -1.07 - - - - - - - 2.62 - - - - - - - - - 0.24 - - - -1.27 3.39 2.0 - - -
-7.87 1.32 -8.04 -5.92 - - 1.67 -1.12 -0.21 -0.96 -0.93 1.72 -1.23 -0.28 0.18 -0.89 -3.19 1.59 -1.77 -0.87 -7.17 -4.0 -4.94 -5.62 -0.65 -0.51 -0.72 - - -6.7 - -6.73 - -4.48 - - -6.83 - -7.12 -5.74 -4.66 -5.2 -5.76 -3.11 4.0 3.63 - - -
-2.55 2.75 - - - - -2.14 -3.72 -0.09 -1.75 -1.92 2.23 - - - - - - - - - - - - - - - - - - - -0.42 - - - - - - - - -3.98 - - - 4.9 2.27 - - -
-0.49 3.59 - - - - - - - - - - - 4.09 - - - - - - 0.27 - - - - - - - - - - - - - - - 2.78 - - - - - - 1.56 2.36 1.59 - - -
- 4.74 - - - - - - 3.32 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.61 - - - -
- 4.36 0.65 - - - - - - - - - - - - - - - - - - - - - 2.64 - - - - - - - - - - - - - - - - - - -2.55 4.36 - - - -
-0.16 3.32 0.2 -0.83 -2.53 -0.31 1.96 2.13 -1.87 - -3.17 1.17 - -0.93 - - - -4.3 - -4.07 - - -3.74 -2.14 - - - - - - - - - - - 0.05 - - - - - -2.48 - -0.55 4.1 2.16 - - -
-0.08 4.15 - 1.19 1.63 2.63 - 0.03 - - -0.96 - - - - - - - - - -0.57 - -0.5 - - - - - - - - - - - - - - - - - - - - - 3.99 - - - -
2.04 2.64 -0.96 0.16 -1.91 1.54 0.14 0.48 - - -2.59 0.68 0.35 0.2 -0.13 2.9 -1.33 0.44 - 0.15 - - -5.09 -1.81 1.02 - -1.5 - - - - -0.86 - - - - - - - -3.11 -3.22 -3.0 -2.87 -1.42 3.06 0.37 0.94 -1.91 -
- 3.78 - - - - - - -0.29 - - - - - - - - - - - - - - -2.14 - - - - - - - - - - - - - - - - - - - 0.14 5.05 - - - -
-4.2 3.88 - - - 0.29 - - -2.32 - -3.06 - - - - - - - - - -2.11 - -4.04 -0.52 - -0.46 - - - -0.38 - 0.04 - - - - - - - - - - - - 4.65 2.0 - - -
0.98 3.8 - - - 2.88 - - - - -3.66 - - - - - -0.56 -4.25 - - -2.83 - - - - 1.3 - - - - - -0.43 - - - - - - 1.01 - - - - -0.1 3.94 1.75 - - -
0.11 3.02 -1.59 - - 1.32 - - - - -0.24 - - - - - -1.15 - - - - -2.12 - -0.69 - - - - - - - - - - - - - - - - - - - - 4.51 3.58 - - -
-5.22 -0.48 -4.77 - - - 0.89 1.03 0.46 -2.91 -1.71 -2.09 0.27 0.06 -0.29 0.29 -1.25 0.58 -4.66 1.43 -2.9 -3.22 -3.07 -3.67 -0.51 -1.37 -3.44 -3.28 -3.88 -3.49 -3.63 -3.58 -3.58 -3.58 -3.4 -2.47 -2.56 -2.38 -2.64 -2.92 -2.38 -2.43 -2.35 0.66 4.45 2.03 0.81 -1.53 -6.1
-6.77 -2.37 - - - -3.07 2.76 3.85 -1.23 -6.06 -4.0 -3.2 -2.06 -0.1 -4.29 - -4.95 -2.14 - 0.45 -9.47 -4.37 -6.63 -4.19 -1.36 -3.11 -4.57 - -4.83 -4.16 -3.97 -7.32 - - - - - -3.89 - -4.29 -4.3 -2.92 -4.9 -1.75 4.3 1.41 -3.29 -6.04 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.