Heatmap: Cluster_8 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00268370 (evm_27.TU.AmTr_v1.0_scaffold00001.421)
-0.38 - -1.49 -0.29 0.11 - -3.04 - -3.36 -3.46 0.99 1.2 -0.27 -1.96 0.75 2.82 -0.78 -0.36 -0.04 -1.06 -0.23 -0.14
AMTR_s00001p00268440 (evm_27.TU.AmTr_v1.0_scaffold00001.423)
0.99 -1.36 0.3 -3.0 1.33 -5.93 -3.53 -7.62 -4.19 -3.83 1.58 0.69 -0.24 -2.38 -0.18 2.45 -0.49 -0.85 -0.04 -2.3 -1.08 -0.65
AMTR_s00003p00027540 (evm_27.TU.AmTr_v1.0_scaffold00003.12)
0.01 0.19 0.17 -0.34 1.59 -4.8 -7.54 -2.12 -5.43 -3.47 -0.76 -0.41 0.51 0.21 -2.03 2.46 -0.22 -0.87 -0.32 -0.64 -0.95 0.6
AMTR_s00004p00168450 (evm_27.TU.AmTr_v1.0_scaffold00004.186)
- - - - 3.25 - - - - 0.32 - - 2.87 - 0.29 - - - - 0.29 - 0.58
AMTR_s00007p00042900 (evm_27.TU.AmTr_v1.0_scaffold00007.20)
- - - - 2.89 - - - - -0.71 - - - - - 3.8 - - - - - -
AMTR_s00010p00117170 (evm_27.TU.AmTr_v1.0_scaffold00010.70)
- - - - 0.67 - - - - -4.39 0.17 1.93 0.26 -1.44 -2.12 2.96 0.38 1.74 - -0.64 - -0.83
AMTR_s00010p00152590 (evm_27.TU.AmTr_v1.0_scaffold00010.113)
- - - - 3.69 - - - - -0.3 - - - -0.71 -0.86 - - - - 2.54 - 0.39
AMTR_s00010p00157060 (evm_27.TU.AmTr_v1.0_scaffold00010.119)
1.08 -1.27 -0.82 -8.2 0.91 -4.65 -3.12 -9.33 -2.33 -1.79 0.15 0.23 -0.26 -0.44 0.42 1.61 -1.06 1.71 0.34 -0.57 0.26 0.34
AMTR_s00010p00243630 (evm_27.TU.AmTr_v1.0_scaffold00010.316)
-0.09 - - -8.07 1.88 - -1.74 -0.16 -1.16 -1.32 -2.59 -0.65 0.91 1.42 1.43 2.04 -3.1 -1.21 -1.45 1.06 -2.62 -5.21
AMTR_s00010p00257800 (evm_27.TU.AmTr_v1.0_scaffold00010.406)
- - - - 0.14 - - - -1.15 -2.05 2.31 - 0.29 - -1.09 3.49 - - - -1.16 - 0.89
AMTR_s00010p00262210 (evm_27.TU.AmTr_v1.0_scaffold00010.461)
-0.48 0.48 - - 1.47 - -1.26 - -1.07 -0.04 1.81 -0.41 -1.49 -1.48 -2.44 -1.03 0.8 1.66 -0.11 0.45 0.77 -0.57
AMTR_s00010p00262230 (evm_27.TU.AmTr_v1.0_scaffold00010.462)
- -0.19 - 0.62 1.65 - -0.72 -4.1 -1.26 -1.07 1.02 1.45 0.12 -1.19 -1.56 -1.15 -0.56 0.63 0.53 -0.34 1.56 -1.34
AMTR_s00014p00117020 (evm_27.TU.AmTr_v1.0_scaffold00014.42)
- - - - 2.85 - - - - - - - 0.2 -1.36 -0.66 2.46 -0.12 1.83 0.85 -1.99 - -0.71
- - - - 1.25 - - - - - 1.83 - - - - 4.01 - - - - - -
AMTR_s00017p00256400 (evm_27.TU.AmTr_v1.0_scaffold00017.282)
0.18 -0.68 -0.92 -3.01 -5.44 -6.35 -10.92 - -9.42 - 1.64 1.2 1.6 -3.22 -2.39 2.67 0.1 -1.71 -1.36 -2.38 -2.73 1.25
AMTR_s00020p00124950 (evm_27.TU.AmTr_v1.0_scaffold00020.46)
- - - - 2.68 - -0.11 - - - - - -0.99 - - 3.69 - - - 0.38 - -
AMTR_s00023p00161390 (evm_27.TU.AmTr_v1.0_scaffold00023.96)
- - - - 2.63 - -1.44 - - -0.31 - - - - - 3.53 - - - - - 1.63
AMTR_s00023p00215350 (evm_27.TU.AmTr_v1.0_scaffold00023.160)
- - - - 1.47 - -0.43 - 0.62 - - - -0.16 -0.54 - 3.81 - - - - - 0.44
AMTR_s00023p00229700 (evm_27.TU.AmTr_v1.0_scaffold00023.181)
- - - - 2.35 - -2.94 -22.99 -2.11 -2.88 - 2.04 -0.14 0.34 -2.38 - - 2.85 -0.31 -1.82 0.69 -
AMTR_s00024p00112030 (evm_27.TU.AmTr_v1.0_scaffold00024.57)
- - - - 1.86 - -1.49 - -0.39 -1.31 -1.32 0.62 -0.45 -1.48 -0.36 -0.01 -0.43 3.1 0.86 -0.33 - -3.11
AMTR_s00026p00183780 (evm_27.TU.AmTr_v1.0_scaffold00026.89)
- - - - 3.39 - - - - - - - -0.68 - - 3.44 - - - - - -
AMTR_s00026p00231340 (evm_27.TU.AmTr_v1.0_scaffold00026.126)
- - - - 2.17 - - - 2.35 - - - 2.69 - 1.05 - - - - 1.96 - -
AMTR_s00029p00061100 (evm_27.TU.AmTr_v1.0_scaffold00029.55)
- - - -2.41 1.63 - -1.13 - -0.36 -0.35 1.12 1.06 -1.3 0.1 1.79 2.91 - - - - - -
AMTR_s00029p00214340 (evm_27.TU.AmTr_v1.0_scaffold00029.319)
-0.36 0.01 -0.34 -0.86 0.62 -0.53 -0.55 -1.0 0.24 0.01 -0.05 -0.27 -0.06 0.87 0.93 1.58 -1.88 -1.38 -1.14 -0.03 -0.95 0.26
AMTR_s00029p00241310 (evm_27.TU.AmTr_v1.0_scaffold00029.414)
- 1.12 0.47 -0.67 0.85 -5.63 -2.62 -0.91 -3.33 -2.86 1.01 0.23 0.25 0.16 0.07 1.87 -0.17 -0.11 0.04 -1.37 -1.07 0.24
AMTR_s00032p00156270 (evm_27.TU.AmTr_v1.0_scaffold00032.123)
0.15 -1.6 0.17 -5.07 -0.03 -0.76 -1.2 -3.21 0.26 -0.04 -0.77 0.38 0.58 0.8 0.99 1.12 -0.71 0.19 -0.02 0.63 -0.06 -0.75
AMTR_s00032p00156310 (evm_27.TU.AmTr_v1.0_scaffold00032.124)
0.05 -1.22 -0.27 -0.6 0.85 -3.51 -1.35 -1.08 -0.03 -0.16 -0.38 0.18 0.57 0.67 0.73 1.5 -0.71 0.07 0.03 0.24 -0.54 -1.31
AMTR_s00037p00221530 (evm_27.TU.AmTr_v1.0_scaffold00037.125)
- - - - 3.12 - - - - - - - - - - 3.73 - - - - - -
AMTR_s00038p00199960 (evm_27.TU.AmTr_v1.0_scaffold00038.146)
0.62 -1.24 -0.15 -1.37 1.77 -5.08 -0.83 -1.67 -0.97 -0.78 0.04 -0.12 -0.31 0.25 0.93 2.09 -0.92 -0.79 -1.82 -0.18 -0.45 -2.03
AMTR_s00038p00200260 (evm_27.TU.AmTr_v1.0_scaffold00038.147)
-0.79 -5.07 0.34 -2.65 1.61 -6.57 -0.5 -1.26 -0.8 -0.4 -0.2 0.16 0.21 0.56 1.38 2.07 -1.83 -0.94 -0.92 -0.02 -1.14 -1.92
AMTR_s00039p00230040 (evm_27.TU.AmTr_v1.0_scaffold00039.215)
0.08 -0.4 -0.12 1.44 -0.07 0.3 -0.91 -3.04 -1.41 -0.96 0.34 0.1 0.57 -0.3 -0.14 1.65 -1.15 -0.98 -0.39 -0.49 -2.54 0.64
AMTR_s00039p00234040 (evm_27.TU.AmTr_v1.0_scaffold00039.223)
- -0.46 0.13 - 0.33 -4.85 -0.91 - 2.22 0.88 -0.51 -0.8 0.66 -1.67 -2.01 2.83 -1.31 -2.36 -4.68 -4.79 -1.23 -2.17
AMTR_s00040p00088950 (evm_27.TU.AmTr_v1.0_scaffold00040.49)
- - - - 2.98 - - - -0.45 - - - - - - 3.74 - - - - - -
AMTR_s00049p00091290 (evm_27.TU.AmTr_v1.0_scaffold00049.61)
-1.53 -1.03 -1.42 -2.51 2.45 -6.58 -8.54 -3.06 -5.77 -3.1 -0.09 -0.08 -2.65 -3.87 -3.4 2.56 -1.11 1.87 -0.37 -1.62 0.44 -2.34
AMTR_s00054p00200090 (evm_27.TU.AmTr_v1.0_scaffold00054.79)
1.05 - - - 2.27 - - - -3.31 - -0.12 - 0.3 -0.49 -2.21 2.09 - 1.47 - 0.39 1.31 0.14
AMTR_s00055p00097380 (evm_27.TU.AmTr_v1.0_scaffold00055.36)
0.56 0.56 - -6.01 -0.14 - -4.78 -3.25 0.7 -1.13 -0.27 -0.87 0.36 -4.47 1.21 -0.34 0.14 1.36 0.19 1.47 0.7 -0.15
AMTR_s00055p00156700 (evm_27.TU.AmTr_v1.0_scaffold00055.74)
- - - - 2.35 - -1.61 - 0.59 -0.88 - - -0.8 -2.89 -1.48 3.5 - - - - - 1.11
AMTR_s00059p00123280 (evm_27.TU.AmTr_v1.0_scaffold00059.97)
- - - - -5.8 - - - 2.52 0.04 -4.73 -2.97 -2.89 -1.12 -5.37 3.64 -3.16 - -3.27 -1.37 -3.31 0.27
AMTR_s00059p00217690 (evm_27.TU.AmTr_v1.0_scaffold00059.262)
-0.95 -3.73 -2.52 - 1.32 - -7.01 -3.7 -2.62 -3.64 -0.16 1.25 -0.25 0.28 1.48 2.24 -0.65 0.13 -0.25 0.3 0.36 -1.04
AMTR_s00061p00096800 (evm_27.TU.AmTr_v1.0_scaffold00061.73)
-0.6 -5.8 - -3.29 -0.46 -1.9 0.46 -9.46 -0.2 0.06 1.0 0.64 1.08 -0.28 1.44 2.02 -0.04 -0.47 -0.81 -0.98 -2.27 -0.54
AMTR_s00062p00110550 (evm_27.TU.AmTr_v1.0_scaffold00062.86)
- - - - 3.24 - - - - - - - - - 1.14 3.37 - - - - - -
AMTR_s00063p00197850 (evm_27.TU.AmTr_v1.0_scaffold00063.77)
- - - - 2.39 - - - -1.23 -1.41 - - -1.18 1.19 0.27 3.46 - - - -1.72 - -0.51
AMTR_s00067p00140140 (evm_27.TU.AmTr_v1.0_scaffold00067.128)
-1.0 2.04 1.11 -4.63 0.53 - -3.65 - -3.49 -3.33 0.61 0.54 0.31 -0.17 0.36 2.01 -0.76 -0.79 -0.67 -1.33 -2.27 -0.57
AMTR_s00070p00129750 (evm_27.TU.AmTr_v1.0_scaffold00070.70)
- - - - 2.66 - - - -1.08 -1.02 - - - - - 3.55 - - - 1.58 - -
AMTR_s00072p00089700 (evm_27.TU.AmTr_v1.0_scaffold00072.39)
- - - - 2.7 - - - - - - - - - - 3.69 - - - - - 1.35
AMTR_s00072p00122060 (evm_27.TU.AmTr_v1.0_scaffold00072.62)
- - - - 3.24 - - - -0.16 0.18 - - - -1.5 -0.58 3.0 - - - - - 0.6
AMTR_s00078p00048310 (evm_27.TU.AmTr_v1.0_scaffold00078.23)
- - - -3.45 2.26 - -7.62 - -7.49 -4.66 -1.45 0.18 -0.39 -1.38 0.4 2.34 0.81 -0.01 -0.33 0.26 -0.36 1.33
AMTR_s00079p00131240 (evm_27.TU.AmTr_v1.0_scaffold00079.53)
- - - - 2.48 - -2.61 - -3.01 - - 0.36 - - -0.11 3.8 - - - - - -
AMTR_s00081p00020790 (evm_27.TU.AmTr_v1.0_scaffold00081.6)
- - - - 0.67 - -3.68 - -3.75 -4.16 2.08 - 1.37 -0.03 0.05 0.45 -0.02 2.41 - 1.24 - 0.41
AMTR_s00082p00140750 (evm_27.TU.AmTr_v1.0_scaffold00082.35)
- - - - 2.86 - - - - - - - - - - 3.88 - - - - - -
AMTR_s00086p00119290 (evm_27.TU.AmTr_v1.0_scaffold00086.64)
0.29 - -0.97 -3.71 2.73 - -4.04 -0.92 -1.29 1.14 0.04 -0.18 -1.74 -1.86 -1.66 1.07 -3.25 0.89 0.12 -1.19 0.56 -0.98
AMTR_s00086p00178630 (evm_27.TU.AmTr_v1.0_scaffold00086.115)
- - - - 2.12 - - - -1.88 -2.05 - - 2.37 1.93 0.14 2.64 - - - -0.22 - -
AMTR_s00090p00019990 (evm_27.TU.AmTr_v1.0_scaffold00090.3)
- - - - 2.59 - - - -1.71 - - 3.27 -1.27 -0.58 0.66 - - - - 1.74 - -
AMTR_s00090p00067540 (evm_27.TU.AmTr_v1.0_scaffold00090.23)
- - - - 0.59 - 0.91 - -0.17 -0.11 2.55 - -0.34 -3.26 -3.38 - 0.48 2.42 0.26 -0.88 - 0.56
AMTR_s00090p00156810 (evm_27.TU.AmTr_v1.0_scaffold00090.87)
- - 0.39 - 1.33 - - - -1.25 -2.95 1.15 1.96 1.23 0.19 -0.48 - 0.97 1.76 - 0.59 - -1.18
AMTR_s00091p00082480 (evm_27.TU.AmTr_v1.0_scaffold00091.28)
- - - - 3.39 - - - -1.3 - 1.67 - -1.05 - -1.71 2.84 - - - - - -
AMTR_s00091p00144220 (evm_27.TU.AmTr_v1.0_scaffold00091.55)
- - - - 2.01 - -1.85 - -1.71 - 1.37 - 0.4 2.02 0.16 2.54 0.97 - - - - -0.95
AMTR_s00095p00142380 (evm_27.TU.AmTr_v1.0_scaffold00095.106)
- 1.58 - - 1.52 - - - -3.2 -3.58 -1.23 2.87 0.65 0.04 -2.28 - 1.05 - 0.19 0.7 - -0.85
AMTR_s00097p00120580 (evm_27.TU.AmTr_v1.0_scaffold00097.28)
-0.18 -5.99 2.52 -1.71 1.82 -3.65 -0.33 0.04 -0.4 0.02 -2.23 -1.14 -2.57 -0.54 -1.42 -0.44 -1.9 0.69 -1.03 -1.42 1.25 -3.11
AMTR_s00097p00120710 (evm_27.TU.AmTr_v1.0_scaffold00097.29)
1.39 -6.74 1.75 -0.95 1.44 -3.21 -0.87 -6.01 -0.51 -0.26 -0.96 -0.97 -0.31 -0.43 0.76 -0.32 -1.03 0.14 -1.2 -0.4 1.21 -1.29
AMTR_s00103p00027130 (evm_27.TU.AmTr_v1.0_scaffold00103.9)
- - - - 2.02 - - - -2.08 -3.48 -0.35 - -3.14 - -1.97 4.04 - - - - - -
AMTR_s00103p00038400 (evm_27.TU.AmTr_v1.0_scaffold00103.16)
- - - - 1.89 - - - - - - - -0.72 - -2.42 3.2 0.71 - 1.41 - 1.42 0.42
AMTR_s00105p00088160 (evm_27.TU.AmTr_v1.0_scaffold00105.48)
- - - - 0.99 - -0.17 - 1.4 0.97 0.25 1.06 -0.39 -0.26 0.3 2.81 - - -0.3 -1.63 - -1.95
AMTR_s00108p00016260 (evm_27.TU.AmTr_v1.0_scaffold00108.2)
- - - - 2.73 - - - -1.37 -3.1 1.0 - -0.38 -0.66 -0.54 2.5 -0.5 1.29 -0.69 -2.04 0.13 -
AMTR_s00127p00109100 (evm_27.TU.AmTr_v1.0_scaffold00127.28)
- - - - 0.8 - -4.75 - -0.92 -3.45 0.31 2.66 -0.53 -0.38 0.74 - 0.05 0.88 0.37 0.17 1.31 0.2
AMTR_s00130p00089180 (evm_27.TU.AmTr_v1.0_scaffold00130.41)
1.16 - - - 1.36 - -3.6 - -3.58 -3.31 0.38 1.7 -0.13 -5.15 -1.06 2.72 - - 0.47 0.19 - 0.86
AMTR_s00136p00020380 (evm_27.TU.AmTr_v1.0_scaffold00136.4)
-2.82 -2.25 -6.3 -7.4 3.02 -4.09 -7.79 -6.81 -5.85 -2.67 -1.34 -0.76 -4.14 -4.48 -1.51 3.13 -6.35 0.41 -0.71 -1.68 -0.49 -3.3
-1.43 -2.81 - -7.96 1.55 - -5.9 -3.38 -3.61 -1.15 -1.76 1.05 -5.19 -3.02 -0.73 2.52 -7.44 0.64 0.15 -0.43 2.45 -2.34
AMTR_s00138p00058230 (evm_27.TU.AmTr_v1.0_scaffold00138.29)
- - - - 3.04 - -3.49 - -3.45 - -0.71 - - - -3.96 3.51 - - - - - 0.61
AMTR_s00138p00058590 (evm_27.TU.AmTr_v1.0_scaffold00138.30)
- - - - 2.74 - -2.79 - - - 0.28 - - -2.98 -3.07 3.78 - - - - - -
AMTR_s00143p00072540 (evm_27.TU.AmTr_v1.0_scaffold00143.16)
- -4.15 -5.71 - 1.59 - -2.72 - -3.81 -3.34 -0.11 0.85 -0.73 -1.88 0.63 2.05 0.69 0.82 0.59 0.53 1.23 -0.67
AMTR_s00146p00034270 (evm_27.TU.AmTr_v1.0_scaffold00146.15)
-2.3 -2.25 -2.43 -6.15 2.55 - -8.58 -0.26 -6.19 -3.56 -1.09 -0.93 -1.5 -2.23 -1.15 1.25 -2.34 1.63 0.79 0.57 1.89 -7.61
AMTR_s00156p00061400 (evm_27.TU.AmTr_v1.0_scaffold00156.32)
- - - 2.24 -1.8 - -6.27 - -3.21 -4.72 1.08 - -0.31 -2.16 0.09 3.27 -4.86 - -1.46 -5.0 - 1.36
AMTR_s00158p00039250 (evm_27.TU.AmTr_v1.0_scaffold00158.1)
- - - - 1.18 - - - - - 1.17 - -2.61 0.82 2.73 - - - 0.87 2.77 - -1.79
AMTR_s00161p00045530 (evm_27.TU.AmTr_v1.0_scaffold00161.12)
- - - - 0.5 - - -1.9 -2.93 - 0.19 2.65 0.47 0.44 -0.31 - 1.05 - -0.29 1.14 1.72 -0.29
AMTR_s00165p00019610 (evm_27.TU.AmTr_v1.0_scaffold00165.4)
- - - -6.22 2.88 - -5.82 0.84 -4.49 -1.58 -0.28 -0.16 -5.87 -5.92 -5.46 2.62 -4.43 1.34 -1.11 -5.12 0.51 -4.71
AMTR_s00170p00050820 (evm_27.TU.AmTr_v1.0_scaffold00170.23)
-0.99 -0.08 -0.85 -0.55 1.18 -0.11 -2.5 -5.43 -2.64 -2.47 1.17 0.53 0.22 -0.39 0.74 1.91 -0.63 0.33 -0.29 -0.68 -0.48 -1.13
AMTR_s00232p00011240 (evm_27.TU.AmTr_v1.0_scaffold00232.3)
- - - -1.13 -5.15 - -5.78 - - -5.43 2.02 - 1.78 -5.32 - 1.94 -0.01 2.72 -2.11 - - 1.21
AMTR_s00240p00016010 (evm_27.TU.AmTr_v1.0_scaffold00240.2)
- - - 0.03 2.23 - - - - - - - -0.47 1.69 - 3.33 - - - 1.2 - -
AMTR_s00248p00017420 (evm_27.TU.AmTr_v1.0_scaffold00248.3)
- - - - 2.38 - -2.53 - -1.39 -0.57 - - - -0.06 1.88 - - - - 0.31 3.12 -0.02
AMTR_s00316p00011560 (evm_27.TU.AmTr_v1.0_scaffold00316.1)
- - - - 1.25 - -6.79 - -4.21 -3.42 -2.79 - -0.47 -2.07 2.74 0.22 -2.53 1.24 -0.13 1.72 0.63 1.16
AMTR_s00829p00008100 (evm_27.TU.AmTr_v1.0_scaffold00829.1)
- - - - 0.19 - - - - - 2.77 - -1.39 -1.78 1.02 - 0.85 2.8 - -1.2 - 1.09
AMTR_s02249p00006170 (evm_27.TU.AmTr_v1.0_scaffold02249.1)
- - - - 0.73 - - - - -1.79 1.57 - 1.69 -1.09 - 3.74 - - - - - -
AMTR_s02519p00002180 (evm_27.TU.AmTr_v1.0_scaffold02519.1)
- - - - 1.82 - - - - - - - - - - 4.21 - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.