Heatmap: Cluster_461 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Cambium and expanding xylem
Cambium
Expanding xylem
Expanding and mature xylem
Maturing xylem
Maturing xylem and dead early wood
Wood
Dead early and late wood
Dead early wood
Dead late wood
Vegetative shoots - needles
Vegetative shoots - stem
Vegetative shoots
Girdled twig - stem
Dried twig - needles
Girdled twig - needles
Needles
Needles - dawn
Needles - later afternoon
Needles - midday
Needles - night
Buds
Female flower
Male flower
Pineapple galls
Somatic germinants - abnormal type
Somatic germinants - normal type
Cell culture - H20 - 5 days
Cell culture - KI added - 5 days
Cell culture - KI added - 20 days
Cell culture - KI removed - 4 days
Cell culture - KI removed - 12 days
Cell culture - solid medium
- -6.43 - - - - 0.24 - - - -2.53 0.07 -0.67 -2.93 -2.54 -0.51 -0.77 -1.65 -4.66 -3.73 - 0.2 0.81 -0.05 0.53 0.72 0.66 0.94 1.94 2.3 1.18 1.3 1.99
-0.53 -0.4 -0.65 -0.71 -0.67 -0.47 -0.2 -0.54 -0.67 -0.49 -0.32 -0.02 -0.59 0.05 -0.2 -0.58 0.46 -0.36 -0.74 -0.76 -0.55 -0.04 0.01 -0.71 0.24 0.5 0.56 0.75 1.1 0.88 0.35 0.46 1.02
-2.14 -1.53 -2.29 -2.29 -2.37 -1.85 -1.03 -2.55 -2.4 -1.74 -0.52 -0.4 -0.24 -0.15 -0.7 -0.89 0.3 -0.86 -0.49 -0.88 -0.48 -0.67 -0.4 -0.78 -0.65 0.75 0.76 1.33 1.58 1.54 1.38 1.23 1.56
-0.71 -0.79 -0.83 -0.9 -1.01 -1.29 0.81 -1.59 -1.53 -1.22 -0.19 0.45 -0.11 0.22 0.37 -0.03 0.1 -0.15 -0.13 -0.24 -0.19 0.28 0.61 0.02 0.26 0.09 0.11 0.41 0.66 0.65 0.36 0.38 0.68
-0.43 -0.01 -0.94 -1.01 -0.66 -0.52 0.65 -0.64 -0.27 -0.26 -1.44 0.82 -0.38 0.29 -1.84 -1.17 -0.53 -1.14 -1.56 -1.42 -1.45 -0.39 0.38 -0.93 -0.02 0.02 0.26 0.58 1.26 1.43 0.77 0.4 1.36
-1.59 -0.94 -1.81 -1.23 -1.88 -1.04 -0.31 -2.07 -2.34 -1.79 -1.04 -0.24 -1.01 -0.09 -0.77 -1.18 0.06 -0.95 -1.16 -0.89 -0.92 -0.49 -0.86 -0.93 -1.01 0.67 0.83 1.51 1.63 1.45 1.44 1.18 1.57
-0.45 -0.76 -0.23 -0.65 -0.3 -0.12 0.38 -1.26 -1.37 -1.78 -0.88 -0.27 -0.21 -0.37 -0.06 -0.93 -0.3 -0.84 -0.89 -0.8 -0.81 -0.11 0.12 -0.11 -0.45 0.52 0.38 0.66 1.14 1.39 0.72 0.64 1.31
-0.89 -1.05 -0.71 -0.97 -0.5 -0.53 0.55 -0.41 -0.83 -1.7 -0.46 0.0 -0.2 -0.05 -0.94 -0.48 -0.31 -0.48 -0.48 -0.84 -0.48 0.33 0.09 -1.14 0.0 0.49 0.35 0.17 1.33 1.57 0.35 0.11 1.4
-1.7 -1.51 -4.38 -4.05 -4.02 -3.72 0.13 -4.45 -6.71 -4.12 -1.6 -0.01 0.19 -0.04 -3.18 -1.93 -0.96 -2.17 -2.16 -1.73 -2.2 0.02 0.62 0.63 -1.72 0.98 0.96 0.82 1.87 2.08 1.16 0.69 1.92
-0.32 0.15 -0.56 -0.85 -0.73 -0.53 0.0 -0.25 -0.21 -0.29 -0.61 -0.32 -0.83 0.15 -0.6 -0.83 -0.5 0.07 -0.56 -0.69 -0.62 0.03 0.31 -0.34 -1.24 0.29 0.39 0.73 1.02 0.98 0.77 0.51 1.12
-0.17 -0.59 -0.59 -0.93 -0.66 -0.55 0.81 -1.35 -1.49 -1.22 -1.09 0.91 -0.07 -0.14 -0.38 -0.83 -0.38 -1.26 -1.55 -1.63 -1.45 0.09 0.17 -0.6 0.37 0.53 0.48 0.51 1.38 1.29 0.49 -0.01 1.26
-1.23 -1.56 -2.66 -2.39 -2.25 -1.72 -0.61 -2.55 -2.13 -1.99 -1.0 -0.14 -0.72 -0.79 -0.52 -1.51 -0.3 -1.63 -1.25 -1.08 -0.65 -0.68 0.36 -0.69 -1.15 0.75 0.72 1.47 1.72 1.75 1.34 1.19 1.69
-0.79 -0.93 -1.4 -1.22 -1.22 -0.63 0.61 -1.43 -1.33 -0.59 -0.06 0.79 -0.14 0.33 -0.3 0.34 -0.11 -0.49 0.21 0.26 0.29 0.36 0.65 -0.17 0.24 0.03 0.06 0.15 0.42 0.66 0.36 0.14 0.59
-1.18 -1.62 -0.81 -0.97 -1.69 -2.64 0.94 -2.97 -3.55 -2.75 -0.54 0.43 0.01 0.13 -0.14 0.0 0.27 -0.98 -1.01 -0.84 -0.53 0.92 0.19 -0.04 0.83 0.51 0.62 0.8 0.75 0.72 0.88 0.49 0.88
-0.36 -0.03 -1.13 -1.38 -0.32 0.02 -0.2 -0.34 0.0 -0.17 -0.55 -0.74 -2.44 -0.79 -1.26 -1.16 -0.73 -0.71 -1.81 -2.04 -2.13 -1.32 -1.74 -1.93 -1.12 -0.21 0.22 0.63 2.0 1.81 1.3 0.8 1.78
-2.39 -2.23 -4.91 -5.48 -5.2 -4.39 -1.38 -5.01 -5.4 -4.73 -1.67 -0.33 -0.69 -0.62 -2.52 -1.57 -0.37 -2.8 -2.66 -3.15 -2.72 -0.15 -0.18 -1.49 0.34 0.56 0.73 1.69 2.06 1.84 1.69 1.5 2.06
-1.18 -1.24 -1.9 -1.82 -1.63 -1.23 -0.69 -1.57 -1.97 -1.67 -0.4 -0.53 -0.58 -1.27 -0.2 -0.21 -0.22 -1.11 -1.04 -0.83 -0.06 -0.64 0.17 0.39 -0.98 0.53 0.63 1.39 1.34 1.35 1.26 1.17 1.48
-2.26 -1.63 -3.52 -4.03 -5.2 -6.62 1.02 -8.87 -7.64 -7.01 -0.66 0.74 -0.28 0.28 -1.14 -0.62 -0.15 -0.52 -1.14 -1.63 -1.04 0.81 0.15 1.1 0.65 0.48 0.38 0.28 1.14 1.73 0.43 0.18 1.78
-1.77 -2.83 -2.97 -2.54 -3.39 -4.17 0.3 -5.18 -6.53 -4.25 -1.28 0.16 -0.82 -0.67 -0.87 -1.73 -0.01 -1.16 -1.09 -1.57 -1.77 0.28 0.5 -1.39 -0.38 0.27 0.33 1.31 1.72 1.98 1.31 1.2 1.98
-3.5 -3.4 -6.8 -3.98 -4.3 -4.16 0.63 -7.14 -5.52 -4.12 -1.11 0.93 -1.52 0.45 -3.81 -0.75 -0.53 -0.83 -1.56 -0.62 -0.88 -0.05 1.46 -1.61 0.34 0.55 0.7 0.89 1.58 1.72 0.95 0.54 1.82
-1.98 -2.12 -2.44 -3.63 -2.51 -3.14 -0.17 -6.07 -4.32 -4.89 -1.62 0.09 -0.73 -0.37 -1.28 -2.02 -0.05 -1.64 -1.22 -1.67 -1.84 0.28 0.23 -2.46 -0.2 0.63 0.67 1.28 1.75 2.0 1.44 1.04 2.04
-4.88 -4.94 -7.35 -6.07 -5.9 -6.88 0.3 -5.61 -10.44 -9.46 -1.58 0.22 -0.1 0.17 -0.92 -1.11 0.06 -1.46 -1.74 -1.31 -1.44 0.57 0.63 -0.95 -0.06 0.29 0.37 1.22 1.66 1.9 1.25 1.09 1.94
- -8.01 -9.46 -9.12 -8.07 - 0.03 -5.79 - - -2.52 0.47 0.32 -0.59 -0.92 -1.96 0.29 -2.62 -1.28 -1.14 -1.35 0.89 0.98 -0.21 0.06 0.5 0.7 1.3 1.56 1.77 1.34 1.11 1.47
-2.16 -2.23 -4.02 -3.03 -3.82 -3.38 0.77 -1.5 -3.21 -3.19 -5.72 1.0 -1.69 -0.17 -2.0 -2.09 -2.32 -2.22 -4.2 -4.53 -2.5 0.96 0.61 1.38 -1.16 0.82 0.6 1.11 1.74 1.6 0.79 0.72 1.93
-3.1 -2.69 -4.11 -5.34 -4.45 -3.47 1.25 -4.23 -4.97 -5.46 -1.08 1.46 -0.72 1.3 -0.92 -0.26 -0.05 -0.39 -0.56 -0.71 -0.62 0.81 0.78 -1.72 -0.29 0.4 0.67 0.28 0.94 1.27 0.46 0.58 1.48
-4.76 -4.06 -4.59 -5.48 -5.99 -5.45 0.02 -6.95 -5.59 -3.71 -1.52 -0.11 -1.36 -1.86 -0.87 -2.04 -0.5 -2.56 -1.64 -1.18 -1.44 -0.31 -0.04 -0.81 -0.74 0.68 0.65 1.68 1.6 1.9 1.6 1.63 2.25
-0.65 -1.16 -0.72 -0.95 -0.57 -0.74 0.84 -1.24 -1.5 -1.2 -0.76 0.46 -1.04 -0.26 -0.87 -0.96 0.65 -1.24 -1.07 -1.32 -1.11 -0.33 -0.43 -0.38 -0.64 0.78 0.68 0.52 1.54 1.43 0.42 0.55 1.44
-1.01 -1.09 -1.27 -1.37 -1.38 -1.36 -0.02 -1.16 -1.65 -1.12 -1.02 -0.05 -0.82 -0.61 -1.05 -0.72 0.07 -1.13 -0.85 -1.07 -0.47 -0.11 -0.0 -0.62 -0.5 0.34 0.56 1.21 1.58 1.61 0.94 0.95 1.59
-4.55 -2.8 -3.58 -2.17 -3.4 -5.31 0.04 -6.35 -5.27 -5.23 -2.57 1.06 -0.4 0.15 -2.05 -2.94 -0.35 -3.87 -3.33 -3.53 -3.01 0.63 0.96 1.4 0.79 0.76 0.93 0.24 1.74 1.58 -0.12 -0.12 2.27
-0.38 -1.0 -0.93 -1.4 -1.64 -1.32 0.66 -3.6 -2.98 -2.27 -0.31 0.33 -0.22 0.43 0.01 -0.07 -0.14 -0.52 -0.51 -0.77 -0.58 0.54 0.13 0.51 0.68 0.32 0.32 0.95 0.78 0.61 0.55 0.57 1.09
-5.58 -5.18 -6.24 -6.59 -6.39 -7.51 0.03 -7.61 -6.96 -6.63 -1.55 1.05 -0.13 0.87 -2.08 -2.19 0.38 -5.2 -1.42 -1.52 -2.47 0.84 1.48 -1.82 0.08 0.53 0.8 0.71 1.42 1.75 0.96 0.69 1.87
-3.68 -4.16 -4.89 -5.24 -4.92 -5.19 0.78 -5.75 -5.77 -3.82 -0.31 1.14 -0.34 1.01 -0.5 -0.18 0.31 0.06 -0.32 -0.03 -0.18 0.26 0.22 0.02 -0.54 0.35 0.6 0.75 0.99 1.06 0.8 0.72 1.38
-1.85 -0.66 -3.97 -4.82 -3.95 -4.42 0.26 -5.1 -5.19 - -3.89 -0.45 0.08 0.05 -0.44 -1.87 -1.07 -2.99 -1.76 -0.86 -1.9 0.78 -0.05 1.16 -2.47 1.03 0.76 1.16 2.22 1.64 0.66 0.87 1.46
-2.17 -2.0 -1.64 -0.98 -1.19 -1.33 0.19 -1.45 -2.0 -0.62 -0.06 1.14 -0.16 0.56 0.27 -0.22 0.02 -0.88 -0.32 -0.59 -0.23 0.93 0.61 0.13 0.5 -0.01 0.24 0.16 0.65 1.04 0.04 0.2 0.96
-1.49 -1.63 -1.54 -1.61 -1.42 -1.03 1.1 -1.72 -1.81 -1.56 -0.15 1.02 -0.1 0.56 -0.22 0.16 -0.08 -0.41 -0.47 -0.3 -0.44 0.42 0.04 0.05 0.06 0.18 0.21 0.29 0.69 1.0 0.32 0.44 1.18
-2.39 -2.49 -2.05 -2.54 -2.57 -2.28 1.23 -2.61 -2.94 -3.12 -0.64 1.05 -0.11 0.97 0.43 -0.24 -0.01 -0.11 -0.01 0.41 -0.16 0.36 0.13 0.46 -0.53 0.21 0.21 0.56 0.76 0.77 0.27 0.31 1.06
-0.35 -0.64 -0.27 -0.44 -0.23 -0.23 -0.65 -0.51 -0.69 -0.59 -1.04 0.24 -0.49 -0.55 0.49 -0.71 0.37 -0.51 -0.83 -0.75 -0.62 -0.07 -0.58 -1.08 -0.3 0.51 0.53 0.59 1.1 1.13 0.65 0.59 1.08
-1.66 -1.22 -1.28 -0.55 -0.99 -0.02 -0.96 -1.71 -0.36 -0.62 0.17 -0.79 -0.46 -1.23 -0.36 -0.23 -0.27 0.06 0.09 -0.02 0.13 -0.87 0.14 -2.02 -0.07 0.08 0.26 0.43 1.18 1.42 1.01 0.59 1.6
-0.99 -0.83 -1.2 -0.59 -1.06 -0.87 0.13 -0.27 -0.29 -0.47 -0.73 -0.17 -0.92 0.21 0.1 -0.35 -0.16 0.24 -0.38 -0.28 0.23 -0.24 -0.54 -0.98 -0.52 0.19 0.32 0.28 1.27 1.41 0.43 0.13 1.38
-1.75 -1.59 -2.66 -2.41 -2.68 -2.35 0.35 -2.64 -2.69 -2.14 -1.4 0.18 -0.12 0.26 -0.8 -1.44 -0.15 -1.07 -1.16 -0.83 -1.32 0.75 0.9 -0.54 0.11 0.25 0.35 1.13 1.35 1.57 1.08 0.93 1.58
-3.36 -1.78 -3.2 -3.51 -3.38 -2.6 0.47 -1.36 -2.49 -1.26 -0.32 0.92 -3.76 1.1 -1.67 -0.03 -1.02 -2.34 -1.45 -1.0 -1.14 0.76 0.32 -1.07 -1.04 -0.2 -0.11 0.62 1.85 1.73 0.97 0.48 2.02
-0.41 -0.49 -1.02 -0.75 -1.24 -0.6 0.44 -1.2 -1.26 -1.07 -1.07 0.3 -0.37 -0.52 -0.33 -1.0 0.43 -1.35 -1.2 -1.08 -0.94 0.22 0.11 -0.46 0.12 0.43 0.48 0.61 0.99 1.32 0.53 0.81 1.61
-1.59 -2.48 -2.56 -2.54 -3.04 -1.83 -0.7 -2.47 -2.19 -2.87 -0.68 -0.62 -3.18 -0.57 0.13 -2.83 -0.37 -0.49 -1.48 -2.15 -2.42 -1.74 -1.32 -0.77 -1.6 0.35 0.41 1.56 1.98 1.96 1.76 1.51 1.93
-4.88 -3.07 - -6.02 -5.66 - 0.95 -2.98 -5.4 - -1.8 1.13 -0.04 0.84 -2.41 -1.91 -0.32 - -5.03 -2.51 -3.06 0.64 -1.53 -1.0 -0.87 0.36 0.23 0.04 1.86 2.51 0.66 0.6 2.33
-5.43 -4.58 - - -7.98 - 0.2 - - - -1.81 0.26 -0.48 -0.55 -1.35 -2.77 -1.07 - -2.32 -3.45 -3.42 -1.57 -3.8 -0.26 0.45 0.28 0.27 1.03 1.82 2.6 1.38 1.21 2.57
-4.44 -5.01 -5.59 -6.68 -6.07 -4.7 -0.17 - -6.78 - -1.67 0.91 -0.16 -0.29 -1.75 -2.28 0.38 -2.06 -2.1 -2.03 -2.0 0.8 1.23 -1.2 0.0 0.0 0.39 0.88 1.69 2.01 1.01 0.96 2.12
-1.74 -2.27 -1.67 -1.66 -1.27 -1.45 -0.28 -1.78 -1.95 -2.84 -0.86 -0.22 -0.29 -0.55 -0.18 -1.23 0.21 -1.29 -0.95 -0.77 -1.11 -0.22 -0.27 0.29 -0.39 0.39 0.56 1.39 1.5 1.42 1.05 1.19 1.71
-2.88 -2.93 -3.98 -3.77 -4.17 -3.9 0.89 -5.94 -4.69 -5.14 -0.5 0.94 -0.4 0.52 -1.07 -0.41 -0.61 -0.71 -0.34 -0.62 -0.55 0.44 0.61 0.6 0.65 0.57 0.69 0.54 1.07 1.31 0.34 0.15 1.86
-4.07 -5.58 -6.56 - -8.05 - 0.19 -6.46 - - -2.84 0.48 0.89 -0.46 -0.52 -2.7 0.4 -4.95 -1.35 -1.57 -1.42 1.09 1.17 0.04 0.11 0.41 0.59 1.15 1.58 1.61 1.18 0.87 1.41
-0.33 -0.04 -1.05 -1.52 -0.56 -0.24 -0.5 -0.52 -0.4 -0.53 -1.39 -0.11 -0.0 0.99 -0.63 -0.81 -0.2 -0.08 -1.34 -0.98 -1.04 0.04 -0.29 -0.09 -0.79 0.25 0.37 0.86 0.98 0.99 0.92 0.69 1.12
-0.37 -0.23 -0.74 -0.51 -0.83 0.1 -0.35 -0.41 -0.5 -0.03 -0.11 -0.13 -1.44 0.08 -0.18 -0.91 -0.69 0.01 -0.35 -0.23 -0.37 -0.67 -0.53 -1.68 -0.8 0.24 0.19 0.64 1.09 1.18 0.97 0.82 1.2
-1.16 -0.68 -2.48 -2.67 -2.39 -1.58 0.19 -2.91 -2.39 -1.02 -1.92 -0.45 -0.22 0.07 -2.5 -2.49 -0.53 -2.91 -3.53 -2.95 -2.79 -0.83 1.01 0.1 -1.95 1.16 1.26 0.89 1.79 1.98 1.22 0.36 1.7
-2.38 -1.99 -2.3 -2.87 -2.61 -1.99 -0.17 -3.66 -2.32 -3.85 -0.65 -0.01 -0.51 -0.05 -1.28 -1.0 -0.78 -0.45 -0.81 -0.95 -0.23 -0.4 0.24 -0.57 -0.85 0.59 0.83 1.3 1.57 1.65 1.26 1.08 1.85
-1.61 -0.94 -2.69 -3.12 -3.05 -2.63 0.92 -2.86 -3.47 -2.02 -1.33 1.44 -2.28 1.04 -4.6 -1.67 -1.25 -2.92 -2.43 -2.36 -2.4 -0.19 0.08 -1.55 -0.69 0.59 0.46 0.8 1.78 2.01 0.74 0.75 2.02
-4.0 -4.0 -5.66 -6.47 -6.67 - 0.55 -5.99 -6.89 -6.02 -1.75 1.27 -2.06 1.14 -2.86 -1.51 -1.4 -2.84 -2.58 -2.17 -2.62 -0.65 -0.31 -2.08 -1.15 0.92 0.86 1.16 1.96 2.1 0.97 0.83 2.21
-2.82 -2.24 -4.95 -4.33 -4.0 - 0.71 -4.54 -2.85 - - 0.92 -2.62 -0.69 - -2.01 -2.17 -2.47 - - -1.98 0.61 0.5 0.67 -0.84 0.74 0.58 1.55 1.97 1.8 1.43 1.18 1.84
-2.97 -2.88 -4.12 -4.0 -4.04 -3.95 0.21 -5.12 -4.49 -4.45 -1.32 1.2 0.56 0.71 -1.91 -1.52 0.31 -2.12 -1.93 -1.73 -1.96 0.94 1.33 -0.47 0.31 0.43 0.66 0.54 1.21 1.59 0.8 0.61 1.65
-0.64 -0.96 -0.73 -0.52 -0.69 -0.2 0.56 -0.88 -0.56 -0.42 -0.97 0.23 -0.27 -0.64 -0.74 -1.6 0.36 -1.56 -1.14 -1.63 -1.06 -0.31 -0.64 -0.52 0.14 0.55 0.61 0.46 1.48 1.49 0.44 0.3 1.51
-0.78 -0.86 -1.13 -1.37 -1.02 -0.83 0.88 -1.7 -1.37 -1.03 -0.22 0.44 0.06 -0.03 0.59 -0.04 -0.08 -0.07 -0.52 0.02 -0.17 0.43 0.13 0.25 0.66 0.13 0.21 0.22 0.66 0.7 0.33 -0.03 0.73

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.