Heatmap: Cluster_180 (HCCA)

View as: (view raw or zlog-transformed)

View using InCHLib : here ( Experimental feature, still under development)

(Values are normalized against highest expression of the row)

Gene	Egg apparatus cell (small)	Egg apparatus cell (medium)	Egg apparatus cell (large)	Ovary	Uninuclear microspore	Generative cell	Pollen	Sperm	Pollen tube (bicellular)	Pollen tube (tricellular)	Flower (bud, female)	Flower (bud, male)	Flower (female)	Flower (male)	Flower (tepals)	Fruit (female)	Apical meristem	Shoot (female)	Shoot (male)	Leaf (male)	Leaves	Root (male)
AMTR_s00001p00259260 (MIND)	1.0	0.14	0.31	0.08	0.12	0.0	0.07	0.05	0.11	0.1	0.38	0.51	0.37	0.28	0.27	0.57	0.21	0.76	0.58	0.66	0.1	0.33
AMTR_s00002p00128010 (FSD2)	0.21	0.0	0.27	0.18	0.08	0.01	0.0	0.0	0.0	0.0	0.69	0.76	0.34	0.07	0.11	0.57	0.77	0.91	1.0	0.63	0.33	0.13
AMTR_s00002p00209800 (evm_27.TU.AmTr_v1.0_scaffold00002.215)	0.06	0.24	1.0	0.2	0.13	0.01	0.18	0.0	0.12	0.13	0.62	0.42	0.4	0.3	0.25	0.55	0.56	0.64	0.54	0.7	0.28	0.28
AMTR_s00002p00241480 (evm_27.TU.AmTr_v1.0_scaffold00002.307)	0.34	0.0	1.0	0.15	0.07	0.03	0.02	0.0	0.02	0.03	0.52	0.46	0.35	0.19	0.2	0.97	0.44	0.8	0.69	0.35	0.82	0.36
AMTR_s00003p00261700 (evm_27.TU.AmTr_v1.0_scaffold00003.347)	0.41	0.36	0.95	0.18	0.11	0.02	0.02	0.14	0.03	0.03	0.7	0.49	0.32	0.13	0.18	0.84	0.95	0.68	0.6	0.49	1.0	0.34
AMTR_s00003p00270020 (evm_27.TU.AmTr_v1.0_scaffold00003.425)	0.0	0.0	0.0	0.02	0.1	0.0	0.0	0.0	0.0	0.0	1.0	0.73	0.34	0.26	0.27	0.38	0.89	0.67	0.72	0.74	0.93	0.07
AMTR_s00004p00026400 (evm_27.TU.AmTr_v1.0_scaffold00004.10)	0.02	0.0	1.0	0.09	0.08	0.01	0.0	0.0	0.01	0.0	0.68	0.45	0.41	0.23	0.14	0.67	0.62	0.69	0.64	0.75	0.53	0.44
AMTR_s00004p00128960 (evm_27.TU.AmTr_v1.0_scaffold00004.119)	0.0	0.0	0.88	0.02	0.23	0.0	0.01	0.0	0.01	0.01	0.67	0.74	0.44	0.13	0.7	0.58	1.0	0.69	0.54	0.43	0.71	0.35
AMTR_s00005p00261480 (ARO4)	0.46	0.0	0.93	0.01	0.09	0.0	0.19	0.01	0.34	0.32	0.69	1.0	0.64	0.53	0.53	0.41	0.52	0.96	0.92	0.47	0.81	0.49
AMTR_s00008p00153950 (evm_27.TU.AmTr_v1.0_scaffold00008.76)	0.18	0.0	0.41	0.02	0.06	0.0	0.02	0.0	0.01	0.01	0.39	0.65	0.41	0.15	0.38	0.5	0.65	0.55	0.46	0.72	1.0	0.33
AMTR_s00009p00268260 (evm_27.TU.AmTr_v1.0_scaffold00009.420)	0.0	0.0	0.0	0.0	0.36	0.0	0.0	0.0	0.01	0.0	0.54	0.42	0.57	0.09	0.14	0.53	0.95	0.25	0.72	0.53	1.0	0.18
AMTR_s00010p00259620 (evm_27.TU.AmTr_v1.0_scaffold00010.425)	0.0	0.0	0.0	0.07	0.2	0.0	0.01	0.0	0.02	0.02	0.68	0.89	0.43	0.12	0.16	0.21	0.89	1.0	0.85	0.44	0.15	0.32
AMTR_s00011p00136520 (PTAC6)	0.37	0.43	0.44	0.09	0.22	0.0	0.16	0.05	0.17	0.18	0.52	0.58	0.42	0.28	0.24	0.85	0.89	0.46	0.64	1.0	0.65	0.31
AMTR_s00012p00087690 (MEE40)	0.01	0.0	1.0	0.0	0.03	0.01	0.0	0.0	0.0	0.0	0.38	0.32	0.21	0.08	0.09	0.46	0.57	0.47	0.44	0.42	0.5	0.15
AMTR_s00016p00084400 (evm_27.TU.AmTr_v1.0_scaffold00016.46)	0.01	0.0	1.0	0.0	0.17	0.0	0.15	0.0	0.28	0.19	0.54	0.9	0.28	0.21	0.39	0.55	0.9	0.74	0.58	0.71	0.73	0.34
AMTR_s00016p00115350 (RARE1)	0.0	0.0	1.0	0.0	0.18	0.04	0.0	0.0	0.06	0.03	0.43	0.32	0.2	0.09	0.16	0.7	0.89	0.61	0.4	0.4	0.92	0.17
AMTR_s00016p00241430 (evm_27.TU.AmTr_v1.0_scaffold00016.255)	0.0	1.0	0.0	0.03	0.38	0.0	0.06	0.0	0.03	0.02	0.19	0.43	0.14	0.05	0.41	0.73	0.87	0.76	0.59	0.78	0.6	0.28
AMTR_s00016p00259690 (evm_27.TU.AmTr_v1.0_scaffold00016.368)	0.0	0.44	0.0	0.0	0.09	0.0	0.03	0.0	0.07	0.04	0.74	1.0	0.34	0.11	0.14	0.48	0.74	0.81	0.71	0.6	0.45	0.25
AMTR_s00017p00235750 (evm_27.TU.AmTr_v1.0_scaffold00017.195)	0.65	0.52	0.68	0.41	0.22	0.02	0.01	0.0	0.0	0.0	0.86	0.73	0.45	0.2	0.2	0.68	0.91	0.94	1.0	0.65	0.58	0.29
AMTR_s00017p00255800 (evm_27.TU.AmTr_v1.0_scaffold00017.280)	0.05	0.36	1.0	0.0	0.16	0.01	0.17	0.14	0.16	0.13	0.55	0.55	0.5	0.62	0.26	0.69	0.37	0.9	0.89	0.38	0.5	0.2
AMTR_s00022p00142340 (evm_27.TU.AmTr_v1.0_scaffold00022.136)	0.23	0.31	1.0	0.23	0.19	0.01	0.02	0.0	0.02	0.02	0.53	0.46	0.57	0.22	0.19	0.58	0.28	0.8	0.72	0.26	0.41	0.23
AMTR_s00024p00194890 (evm_27.TU.AmTr_v1.0_scaffold00024.165)	1.0	0.48	0.05	0.33	0.17	0.07	0.06	0.02	0.12	0.1	0.61	0.79	0.53	0.31	0.2	0.83	0.64	1.0	0.85	0.6	0.32	0.28
AMTR_s00024p00200150 (YLMG1-2)	0.28	0.64	0.58	0.02	0.35	0.1	0.02	0.02	0.04	0.04	0.5	0.46	0.37	0.31	0.39	1.0	0.68	0.64	0.67	0.75	0.66	0.25
AMTR_s00026p00065580 (AAT3)	0.13	0.24	0.77	0.01	0.29	0.16	0.08	0.04	0.08	0.08	0.4	0.51	0.42	0.28	0.18	1.0	0.87	0.62	0.48	0.41	0.58	0.32
AMTR_s00029p00204910 (evm_27.TU.AmTr_v1.0_scaffold00029.293)	0.0	0.0	0.91	0.0	0.35	0.0	0.02	0.0	0.02	0.01	0.81	0.82	0.35	0.14	0.39	0.69	1.0	0.9	0.69	0.48	0.59	0.35
AMTR_s00029p00211500 (PHT4;3)	0.05	0.05	0.62	0.32	0.15	0.0	0.02	0.0	0.02	0.02	0.8	0.9	0.41	0.19	0.12	0.85	0.8	1.0	0.71	0.42	0.54	0.38
AMTR_s00030p00124490 (ABC1)	0.19	0.33	0.42	0.14	0.14	0.01	0.01	0.01	0.03	0.02	0.4	0.29	0.3	0.28	0.3	1.0	0.54	0.57	0.5	0.52	0.59	0.21
AMTR_s00031p00027380 (FTSZ2-2)	0.36	0.01	0.89	0.09	0.07	0.01	0.0	0.0	0.0	0.0	0.6	0.59	0.38	0.14	0.1	0.88	0.81	1.0	0.73	0.47	0.46	0.26
AMTR_s00039p00066180 (evm_27.TU.AmTr_v1.0_scaffold00039.27)	0.83	0.44	0.65	0.0	0.14	0.0	0.06	0.42	0.17	0.13	0.61	0.82	0.18	0.17	0.12	0.51	0.18	1.0	0.73	0.42	0.67	0.43
AMTR_s00040p00098330 (CRR2)	0.0	0.0	0.0	0.0	0.09	0.0	0.0	0.0	0.0	0.0	0.33	0.46	0.18	0.09	0.21	1.0	0.45	0.61	0.45	0.79	0.65	0.25
AMTR_s00041p00228050 (COBL1)	0.0	0.04	0.48	0.2	0.18	0.02	0.0	0.0	0.01	0.01	0.64	0.65	0.57	0.21	0.19	0.4	1.0	0.79	0.85	0.78	0.37	0.5
AMTR_s00045p00155990 (evm_27.TU.AmTr_v1.0_scaffold00045.170)	1.0	0.11	0.77	0.15	0.49	0.02	0.19	0.3	0.21	0.2	0.77	0.8	0.6	0.3	0.38	0.46	0.55	0.77	0.97	0.42	0.49	0.5
AMTR_s00049p00163880 (EMB1006)	0.23	0.01	0.93	0.11	0.22	0.04	0.0	0.06	0.0	0.0	0.77	0.45	0.53	0.34	0.22	0.91	1.0	0.92	0.73	0.6	0.46	0.2
AMTR_s00051p00042220 (evm_27.TU.AmTr_v1.0_scaffold00051.16)	0.77	0.03	0.13	0.05	0.04	0.0	0.01	0.0	0.02	0.02	0.45	0.63	0.34	0.23	0.14	0.86	0.32	1.0	0.88	0.48	0.35	0.4
AMTR_s00051p00085060 (evm_27.TU.AmTr_v1.0_scaffold00051.31)	0.03	0.0	0.0	0.09	0.22	0.0	0.0	0.0	0.0	0.0	0.7	0.89	0.44	0.15	0.27	0.8	0.93	1.0	0.9	0.62	0.7	0.39
AMTR_s00056p00142090 (evm_27.TU.AmTr_v1.0_scaffold00056.117)	0.41	0.0	0.59	0.0	0.02	0.0	0.0	0.0	0.01	0.01	0.84	0.72	0.27	0.16	0.2	0.44	0.75	1.0	0.74	0.44	0.59	0.19
AMTR_s00058p00187000 (evm_27.TU.AmTr_v1.0_scaffold00058.183)	0.0	0.04	0.0	0.0	0.33	0.0	0.03	0.0	0.09	0.06	0.43	1.0	0.23	0.06	0.34	0.26	0.57	0.32	0.44	0.4	0.17	0.25
AMTR_s00059p00132310 (GGPS1)	0.74	1.0	0.42	0.21	0.18	0.0	0.07	0.02	0.1	0.07	0.46	0.55	0.51	0.16	0.24	0.57	0.78	0.57	0.69	0.39	0.36	0.24
AMTR_s00061p00127300 (MEF22)	0.0	0.0	1.0	0.0	0.03	0.0	0.0	0.0	0.0	0.0	0.64	0.44	0.17	0.05	0.22	0.44	0.97	0.49	0.6	0.28	0.45	0.16
AMTR_s00061p00169900 (evm_27.TU.AmTr_v1.0_scaffold00061.178)	0.41	0.9	0.5	0.43	0.39	0.01	0.21	0.01	0.2	0.19	1.0	0.86	0.62	0.63	0.33	0.63	0.87	0.83	0.9	0.44	0.44	0.4
AMTR_s00066p00043610 (IPMS1)	0.29	0.32	0.57	0.18	0.22	0.01	0.04	0.01	0.08	0.09	0.64	0.83	0.47	0.28	0.3	0.93	0.88	1.0	0.9	0.75	0.3	0.52
AMTR_s00066p00101500 (RAP)	0.16	0.02	0.89	0.01	0.06	0.01	0.0	0.0	0.0	0.0	0.43	0.31	0.3	0.22	0.13	1.0	0.65	0.55	0.57	0.6	0.91	0.23
AMTR_s00068p00031610 (evm_27.TU.AmTr_v1.0_scaffold00068.7)	0.0	0.0	0.0	0.01	0.05	0.0	0.0	0.0	0.0	0.0	0.35	0.55	0.25	0.04	0.3	0.83	0.71	0.48	0.61	0.77	1.0	0.21
AMTR_s00071p00171040 (AMK2)	0.93	0.6	0.26	0.1	0.13	0.17	0.02	0.0	0.02	0.03	0.78	0.72	0.45	0.33	0.18	0.95	0.45	1.0	0.83	0.67	0.5	0.48
AMTR_s00097p00038600 (evm_27.TU.AmTr_v1.0_scaffold00097.9)	0.22	0.31	1.0	0.05	0.27	0.02	0.02	0.0	0.01	0.02	0.62	0.62	0.56	0.42	0.13	0.85	0.97	0.73	0.68	0.54	0.52	0.32
AMTR_s00101p00152470 (evm_27.TU.AmTr_v1.0_scaffold00101.128)	0.44	0.7	0.99	0.38	0.45	0.2	0.33	0.07	0.21	0.24	1.0	0.83	0.69	0.46	0.3	0.98	0.91	0.87	0.96	0.36	0.21	0.44
AMTR_s00129p00053890 (evm_27.TU.AmTr_v1.0_scaffold00129.27)	0.0	0.0	0.0	0.0	0.77	0.0	0.01	0.01	0.0	0.0	0.44	0.48	0.31	0.08	0.5	0.65	1.0	0.75	0.52	0.66	0.79	0.34
AMTR_s00130p00078720 (evm_27.TU.AmTr_v1.0_scaffold00130.36)	0.24	0.22	0.44	0.3	0.22	0.01	0.04	0.0	0.05	0.04	0.94	0.7	0.27	0.1	0.11	0.53	1.0	0.68	0.72	0.3	0.73	0.36
AMTR_s00137p00067410 (evm_27.TU.AmTr_v1.0_scaffold00137.29)	0.01	0.0	0.0	0.06	0.38	0.0	0.08	0.03	0.23	0.13	0.68	0.88	0.37	0.18	0.65	0.77	1.0	0.91	0.58	0.74	0.98	0.39
AMTR_s00153p00079500 (evm_27.TU.AmTr_v1.0_scaffold00153.43)	0.0	0.0	0.0	0.01	0.37	0.0	0.01	0.0	0.05	0.04	0.64	0.77	0.52	0.16	0.81	0.58	1.0	0.56	0.53	0.66	0.59	0.32
AMTR_s00159p00021150 (EMB2261)	0.0	0.0	0.0	0.03	0.16	0.0	0.0	0.0	0.0	0.0	0.68	1.0	0.21	0.03	0.09	0.62	0.82	0.88	0.9	0.38	0.2	0.25
AMTR_s00182p00046810 (evm_27.TU.AmTr_v1.0_scaffold00182.26)	0.0	0.0	1.0	0.02	0.21	0.01	0.0	0.0	0.01	0.01	0.78	0.81	0.4	0.23	0.56	0.99	0.8	0.97	0.61	0.54	0.77	0.26

Details

Expression values normalized per gene (using the maximum value, Green cells indicate low expression and red high. (Dark gray cells indicate missing values)