Heatmap: Cluster_21 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00090180 (evm_27.TU.AmTr_v1.0_scaffold00001.61)
- - - - -2.38 - -4.06 - -3.14 -2.01 -1.47 - -1.59 4.36 -6.05 - - - - - - -3.17
AMTR_s00001p00241960 (evm_27.TU.AmTr_v1.0_scaffold00001.278)
- - - - -0.38 - -5.3 - -6.88 -5.19 -0.85 -0.45 1.85 3.9 -0.38 - -1.85 - -2.13 -3.51 - -
AMTR_s00001p00243570 (evm_27.TU.AmTr_v1.0_scaffold00001.283)
- - - -2.86 1.5 - -6.22 -7.79 -11.29 -9.52 -2.68 -0.24 -0.0 3.37 2.7 -4.14 -8.88 - -5.36 -4.18 - -8.52
AMTR_s00001p00243680 (evm_27.TU.AmTr_v1.0_scaffold00001.284)
- - - -6.51 2.06 - -5.63 -6.2 -10.38 - -3.0 -0.12 0.11 3.26 2.56 -3.76 -7.34 -5.4 -4.85 -3.8 - -6.47
AMTR_s00001p00243780 (evm_27.TU.AmTr_v1.0_scaffold00001.285)
-4.93 -3.96 -9.85 -4.23 -1.84 -4.73 -7.38 -11.82 -8.62 -8.63 -0.84 1.38 -0.04 3.56 1.91 -1.41 -4.81 -1.09 -1.13 -1.76 -7.21 -2.3
AMTR_s00001p00272230 (evm_27.TU.AmTr_v1.0_scaffold00001.507)
-0.64 -1.5 - - 0.31 - -1.59 - -3.71 -1.45 - - 1.49 3.64 0.83 - -0.76 - 0.21 - - -2.35
AMTR_s00002p00146900 (evm_27.TU.AmTr_v1.0_scaffold00002.111)
- - - -6.79 0.32 - -5.61 - -7.54 -7.69 -1.15 -0.73 1.97 3.62 0.8 -5.88 -1.92 -1.51 -1.33 -3.3 -3.34 -1.18
AMTR_s00002p00181950 (evm_27.TU.AmTr_v1.0_scaffold00002.157)
-0.77 - - -3.49 -0.91 0.18 -3.21 -10.18 -2.28 -2.36 -1.52 -1.08 0.49 3.83 -0.16 -0.34 -1.29 -5.06 -4.35 -5.2 -4.73 -1.22
AMTR_s00002p00254050 (evm_27.TU.AmTr_v1.0_scaffold00002.380)
- - 1.27 -2.4 -1.21 -3.6 -3.53 -8.41 -2.51 -2.82 -3.7 -2.73 -0.33 3.49 0.56 0.5 -2.87 -1.28 -1.95 0.82 -0.46 -5.27
AMTR_s00002p00260940 (evm_27.TU.AmTr_v1.0_scaffold00002.447)
- - - - -0.03 - - - -4.37 - - - 0.38 4.04 0.17 - - - - - - 1.05
AMTR_s00002p00270090 (evm_27.TU.AmTr_v1.0_scaffold00002.568)
-0.34 - 0.86 -2.72 0.83 -3.83 -5.0 -7.54 -2.72 -2.41 -0.95 1.84 -0.48 2.83 0.6 1.4 -0.47 -5.15 - -7.26 - -2.34
AMTR_s00003p00256450 (evm_27.TU.AmTr_v1.0_scaffold00003.317)
- - - -3.72 -0.49 - -6.12 - -5.2 -4.87 -0.12 0.39 0.79 3.65 2.07 -3.06 -2.35 - -5.66 -7.7 - -3.58
AMTR_s00006p00248680 (evm_27.TU.AmTr_v1.0_scaffold00006.139)
- - - - 1.19 - -2.92 - -2.09 -1.03 -0.99 - 1.16 3.24 1.66 - 0.26 - -0.42 -0.83 - -0.01
AMTR_s00007p00145940 (evm_27.TU.AmTr_v1.0_scaffold00007.105)
- - - - -7.73 - -5.72 -4.52 -10.22 -8.67 -6.77 -4.15 2.3 4.05 -1.32 - - -8.43 - - - -12.29
AMTR_s00007p00146230 (evm_27.TU.AmTr_v1.0_scaffold00007.106)
- - - - -8.66 - -6.13 - -10.09 -10.51 -5.03 -2.84 1.94 4.12 -0.75 - - - -8.72 - - -
AMTR_s00007p00213110 (evm_27.TU.AmTr_v1.0_scaffold00007.195)
-5.36 - 1.19 -6.85 -4.76 -1.58 -2.55 -1.12 -4.35 -3.57 -5.61 -2.73 -0.89 3.96 0.48 -1.3 - - -5.09 -3.09 -4.08 -1.79
AMTR_s00010p00261620 (evm_27.TU.AmTr_v1.0_scaffold00010.455)
-1.42 -7.57 - - -3.83 -0.62 -4.58 - -6.91 -7.96 -4.56 -3.48 0.94 4.01 -2.15 -0.94 - - - -5.77 -6.15 0.92
AMTR_s00012p00264080 (evm_27.TU.AmTr_v1.0_scaffold00012.355)
- 0.9 - -0.06 -0.77 - -3.47 - -1.04 -0.95 -2.22 - -1.34 3.55 1.75 -2.01 - - - 0.47 - -2.53
AMTR_s00016p00176090 (evm_27.TU.AmTr_v1.0_scaffold00016.136)
- - - -2.73 0.36 - -5.19 -7.56 -5.77 -4.55 -5.06 1.9 -0.53 3.8 -0.61 0.37 -4.42 - - -6.95 - -3.18
AMTR_s00016p00177940 (evm_27.TU.AmTr_v1.0_scaffold00016.139)
- - - -0.08 -3.62 - -2.84 - - - - - 1.89 3.87 -2.56 - - - - -5.93 - 1.23
AMTR_s00016p00178190 (evm_27.TU.AmTr_v1.0_scaffold00016.140)
-0.08 -1.09 -0.38 -3.81 -1.11 -1.13 -5.22 -4.59 -7.35 -8.44 -4.21 -3.49 1.33 3.82 -0.4 0.32 - - - -12.46 - -8.56
AMTR_s00018p00095930 (evm_27.TU.AmTr_v1.0_scaffold00018.43)
- - - - 1.47 - - - - - - - 2.24 3.86 - - - - - - - -
AMTR_s00018p00216500 (evm_27.TU.AmTr_v1.0_scaffold00018.136)
0.17 -0.22 -1.39 -1.35 0.79 -6.65 -5.08 -4.07 -4.78 -2.42 -3.93 -5.66 -0.09 3.43 2.28 -3.75 -6.36 -5.87 - -1.8 -3.84 -4.26
AMTR_s00019p00215150 (evm_27.TU.AmTr_v1.0_scaffold00019.262)
0.7 - 1.55 -2.85 0.22 - -4.49 -7.17 -7.44 -5.3 -2.2 -0.93 -0.68 3.27 1.28 -0.76 -2.68 -2.71 -2.31 -2.08 -4.86 0.28
AMTR_s00021p00160590 (evm_27.TU.AmTr_v1.0_scaffold00021.114)
- - - - - - - - - - - - - 4.46 - - - - - - - -
AMTR_s00022p00225700 (evm_27.TU.AmTr_v1.0_scaffold00022.291)
- -5.51 - - -5.18 -2.29 -6.75 - -9.47 -11.4 -7.63 -6.02 1.11 4.21 -1.43 -0.66 -8.05 - -9.09 -10.09 - -5.85
AMTR_s00022p00225940 (evm_27.TU.AmTr_v1.0_scaffold00022.292)
- - - - -6.28 -1.89 -5.83 - -8.19 -8.64 -10.22 - 1.66 4.16 -1.49 -1.74 - - - -11.41 - -5.84
AMTR_s00023p00237480 (evm_27.TU.AmTr_v1.0_scaffold00023.197)
- - - -7.62 0.11 - -0.32 - -0.26 -0.33 0.33 -1.45 1.24 3.27 0.78 -1.24 -0.38 -1.96 -1.23 -1.19 -2.12 -0.83
AMTR_s00036p00208880 (evm_27.TU.AmTr_v1.0_scaffold00036.127)
- - - -7.4 1.48 - -3.1 - -3.57 -3.03 -3.73 -1.94 0.33 3.93 -0.22 -2.51 -5.08 -3.14 -4.11 -4.47 - -0.41
AMTR_s00040p00065120 (evm_27.TU.AmTr_v1.0_scaffold00040.30)
-0.05 -1.79 -0.12 -1.49 0.78 - -5.44 -9.43 -4.96 -5.26 -2.15 -2.43 -0.37 3.34 2.39 -3.54 -2.74 -3.17 -3.51 -4.01 -4.46 -0.8
AMTR_s00043p00208540 (evm_27.TU.AmTr_v1.0_scaffold00043.72)
1.4 - - -9.18 -2.76 - -5.99 - -5.58 -7.0 -4.79 1.73 0.86 3.21 -0.17 - -5.24 - -2.22 -2.11 -2.44 1.68
AMTR_s00044p00213430 (evm_27.TU.AmTr_v1.0_scaffold00044.225)
-4.19 -3.0 -4.35 -3.41 1.31 -5.87 -8.14 -8.31 -9.3 -9.68 -1.92 -0.88 1.2 3.16 2.16 0.23 -2.66 -1.97 -3.09 -1.09 -2.44 -1.75
AMTR_s00053p00185420 (evm_27.TU.AmTr_v1.0_scaffold00053.134)
-6.83 -2.19 -3.86 -9.3 -2.0 -5.95 -4.53 -6.7 -5.31 -5.51 -1.85 0.32 1.92 3.73 0.51 -4.31 -1.82 -1.83 -3.23 -1.08 -3.6 -6.06
AMTR_s00057p00049120 (evm_27.TU.AmTr_v1.0_scaffold00057.26)
-3.0 -2.57 - -3.47 -0.2 -5.96 -5.81 -10.38 -8.49 -8.99 -3.08 -1.48 0.93 3.43 2.61 -0.62 -3.15 -2.28 -2.29 -4.94 -6.46 -2.28
AMTR_s00058p00197140 (evm_27.TU.AmTr_v1.0_scaffold00058.198)
-8.45 -3.36 -10.24 -5.1 -1.94 -0.94 -6.37 - -9.01 -8.26 -3.69 -3.61 0.89 3.48 2.11 -1.68 -5.66 -3.89 -2.99 0.6 -1.62 0.27
AMTR_s00059p00200900 (evm_27.TU.AmTr_v1.0_scaffold00059.224)
- - - - -3.41 - -5.31 - - -6.9 -0.46 0.58 -1.47 3.84 -3.4 1.93 -1.98 -2.31 -2.0 -3.38 - -2.17
AMTR_s00065p00025040 (evm_27.TU.AmTr_v1.0_scaffold00065.9)
- - - -6.85 -0.53 - -4.94 - -6.52 -6.3 -1.56 - -0.28 4.04 1.36 -4.78 -2.63 -4.41 -3.92 -2.33 -2.25 -1.77
AMTR_s00065p00072280 (evm_27.TU.AmTr_v1.0_scaffold00065.39)
0.26 -9.0 -2.6 -4.01 0.79 - -4.58 -10.14 -7.83 -7.25 0.0 -0.19 0.19 2.98 2.0 -0.23 -0.74 -3.33 -2.81 -1.88 -2.1 0.75
AMTR_s00065p00100900 (evm_27.TU.AmTr_v1.0_scaffold00065.56)
-1.06 0.08 -1.95 -2.16 -1.19 -1.57 -0.63 -1.71 -1.4 -1.07 -0.82 -1.24 1.6 3.03 -0.57 -1.14 -0.94 -0.2 -0.45 -1.07 0.26 -1.66
AMTR_s00065p00101300 (evm_27.TU.AmTr_v1.0_scaffold00065.54)
-0.99 -0.58 - -1.02 -0.08 -0.13 -0.42 0.15 -1.4 -0.9 -2.34 -3.42 1.84 3.3 -0.05 -3.36 -2.63 -2.72 -3.88 -2.08 -4.88 -1.87
AMTR_s00065p00131880 (evm_27.TU.AmTr_v1.0_scaffold00065.86)
-3.25 -1.97 -1.5 -1.44 -0.22 0.38 -0.06 -1.17 -1.05 -0.51 -2.38 -2.68 0.61 2.87 1.48 1.4 -1.44 -2.05 -2.19 -2.09 -5.53 -1.09
AMTR_s00065p00201830 (evm_27.TU.AmTr_v1.0_scaffold00065.184)
-1.62 -3.13 -0.22 -7.55 1.87 - -5.22 -8.52 -7.85 -7.76 -2.01 -1.46 0.92 2.97 2.27 -0.37 -3.22 -3.74 -1.99 -2.52 -3.72 -1.4
AMTR_s00068p00204900 (evm_27.TU.AmTr_v1.0_scaffold00068.182)
-1.74 -1.21 -2.39 -1.23 0.11 -3.25 -3.18 -5.13 -3.14 -3.01 0.9 0.05 0.69 3.12 0.45 0.19 0.1 -0.08 -0.95 -1.45 -3.47 -1.29
AMTR_s00069p00038840 (evm_27.TU.AmTr_v1.0_scaffold00069.21)
-0.96 1.62 - - -2.61 - -4.26 - -5.11 -4.58 -2.24 -2.86 -0.65 3.91 -1.13 -2.84 -3.24 -2.47 -1.43 -0.89 -2.62 -2.79
AMTR_s00069p00157890 (evm_27.TU.AmTr_v1.0_scaffold00069.128)
- 0.16 0.19 - -3.58 -4.1 -5.11 - -5.5 -8.41 -1.98 -0.47 -0.92 3.38 -0.61 -0.04 -2.87 -1.66 -1.4 1.35 -0.97 1.1
AMTR_s00071p00174070 (evm_27.TU.AmTr_v1.0_scaffold00071.176)
0.43 -0.34 0.19 -2.71 -5.08 - 0.56 -2.97 0.11 0.1 -2.17 -2.24 -0.16 3.38 -0.41 -2.39 -4.16 -3.79 -4.33 0.55 -2.67 -1.73
AMTR_s00076p00154400 (evm_27.TU.AmTr_v1.0_scaffold00076.51)
- - - - -0.67 - -5.96 - - - - - 1.16 4.16 -3.09 - -1.66 - - -1.54 -1.02 -
AMTR_s00079p00059200 (evm_27.TU.AmTr_v1.0_scaffold00079.17)
-0.97 -1.11 -2.26 -0.9 -0.46 -0.46 -0.05 -2.86 -0.58 -0.4 -0.99 -0.54 0.54 2.93 1.56 -1.92 -2.45 -2.3 -0.63 -0.34 -2.11 -0.39
AMTR_s00091p00146660 (evm_27.TU.AmTr_v1.0_scaffold00091.57)
0.24 - - -3.25 -4.76 -4.24 -7.37 -2.65 -4.79 -4.79 0.21 0.11 -0.04 4.01 -4.01 -8.41 -3.34 -3.52 -1.76 -1.61 -2.67 -
AMTR_s00105p00131970 (evm_27.TU.AmTr_v1.0_scaffold00105.65)
- - - - 0.27 -0.85 -5.57 - -7.11 - - - 0.71 3.75 2.24 - -3.95 - - - - -1.77
AMTR_s00106p00151600 (evm_27.TU.AmTr_v1.0_scaffold00106.125)
-2.53 -2.81 -2.84 -2.07 0.54 -4.83 -7.34 -8.07 -10.28 -9.63 -3.07 -2.6 1.14 3.33 1.88 -0.37 -3.05 -3.95 -2.57 0.11 -3.96 0.41
AMTR_s00107p00154700 (evm_27.TU.AmTr_v1.0_scaffold00107.50)
-1.09 -0.07 -0.38 -9.62 0.66 0.46 -5.22 -5.74 -8.72 -9.07 -0.61 0.86 1.32 2.99 1.71 -2.67 -1.43 -4.1 -6.17 -5.43 -6.26 -6.84
AMTR_s00111p00133140 (evm_27.TU.AmTr_v1.0_scaffold00111.110)
- - - -7.43 1.19 - -4.96 - -5.76 -5.41 -3.24 -2.47 1.6 3.78 1.28 - -4.46 - -4.32 -5.52 - -7.75
AMTR_s00123p00067240 (evm_27.TU.AmTr_v1.0_scaffold00123.7)
- - -5.76 0.56 0.82 - -4.42 -2.2 -4.19 -3.18 -3.76 -0.81 1.26 3.03 1.75 0.36 -4.84 - -7.9 -6.03 - 1.27
AMTR_s00129p00065710 (evm_27.TU.AmTr_v1.0_scaffold00129.39)
-0.39 -3.14 -3.69 1.31 -1.89 - -6.13 -9.53 -6.15 -5.82 -2.05 -2.23 -1.43 3.25 2.0 -2.59 -2.86 -3.28 -2.29 1.36 -2.58 -0.69
AMTR_s00130p00100080 (evm_27.TU.AmTr_v1.0_scaffold00130.46)
- - - -2.36 -3.72 - -4.19 - -2.29 -2.56 -0.51 0.66 0.12 2.97 -0.47 - -2.32 -0.53 0.67 1.32 1.9 -0.63
AMTR_s00136p00059630 (evm_27.TU.AmTr_v1.0_scaffold00136.20)
- - - - -0.75 - -6.05 - -6.5 -5.85 -2.9 - 0.54 3.89 1.95 - -3.16 - - -3.66 -0.38 -3.41
AMTR_s00136p00059680 (evm_27.TU.AmTr_v1.0_scaffold00136.20)
- - - - -1.42 - -5.32 - -7.03 -6.87 -1.57 -1.78 0.84 3.81 1.71 - -3.92 - -2.13 -5.92 0.46 -2.77
AMTR_s00136p00059740 (evm_27.TU.AmTr_v1.0_scaffold00136.20)
- - - - -0.93 - -5.74 - - -5.1 -3.68 -1.9 1.19 3.69 1.81 - -1.96 - -3.25 -4.48 0.92 -3.7
AMTR_s00136p00108810 (evm_27.TU.AmTr_v1.0_scaffold00136.60)
-4.23 -6.02 -7.36 -4.1 1.0 -5.41 -5.4 -8.45 -6.76 -6.8 -1.74 -1.57 -0.39 3.45 2.56 -1.86 -1.18 -3.95 -2.42 -6.26 -6.43 -0.76
AMTR_s00144p00031900 (evm_27.TU.AmTr_v1.0_scaffold00144.10)
-0.18 -0.77 -2.79 -7.45 -0.24 -3.19 -6.28 -9.39 -8.2 -8.19 -0.59 -0.43 1.74 2.97 1.79 -1.32 -1.46 -0.74 -0.37 -1.62 -3.75 -0.27
AMTR_s00150p00035760 (evm_27.TU.AmTr_v1.0_scaffold00150.7)
- 1.04 - - -0.47 - -0.37 - 0.29 1.51 0.65 -1.03 -0.63 3.02 0.57 -1.6 -2.17 - - -1.66 0.21 -5.03
AMTR_s00164p00053740 (evm_27.TU.AmTr_v1.0_scaffold00164.21)
-3.81 - - 1.35 -1.71 - -6.22 -7.33 -7.1 -7.65 -5.1 -2.74 0.4 4.08 -0.82 -4.89 - - - -8.49 - -4.61
AMTR_s00170p00047640 (evm_27.TU.AmTr_v1.0_scaffold00170.21)
1.26 - -2.64 0.72 1.1 - -7.4 -4.58 -5.4 -3.64 -2.62 -2.16 -0.09 3.35 1.49 -5.31 -4.24 -3.94 -3.03 -0.97 -4.09 -1.63
AMTR_s00180p00057430 (evm_27.TU.AmTr_v1.0_scaffold00180.32)
-0.06 - - - -0.2 1.53 -5.18 -3.44 -5.29 -6.04 -3.33 1.92 -0.1 3.44 0.2 -6.09 -4.55 -4.13 -5.79 -9.55 - -2.76
AMTR_s00181p00063450 (evm_27.TU.AmTr_v1.0_scaffold00181.37)
- - - 0.25 1.38 - -4.05 - -2.73 -5.01 -2.4 1.0 0.91 3.47 1.03 - -2.19 - - - - -0.86
AMTR_s00710p00000440 (evm_27.TU.AmTr_v1.0_scaffold00710.1)
- - - - -1.92 - - - -2.84 -4.45 -2.68 - -0.38 3.87 0.14 0.86 - -1.09 -0.99 0.3 -1.05 -1.4
AMTR_s01143p00010430 (evm_27.TU.AmTr_v1.0_scaffold01143.2)
- - - - 0.81 - - - - - - - -0.84 4.3 - - - - - - - -
AMTR_s04502p00002420 (evm_27.TU.AmTr_v1.0_scaffold04502.1)
- - - - 1.87 - - - - - - - 0.97 4.03 - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.