Heatmap: Cluster_180 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
1.65 -1.19 -0.05 -2.01 -1.42 -6.79 -2.09 -2.7 -1.5 -1.65 0.27 0.68 0.2 -0.17 -0.26 0.83 -0.59 1.25 0.87 1.06 -1.62 0.04
-0.64 - -0.23 -0.82 -2.04 -5.49 -6.49 - -6.24 -6.12 1.1 1.24 0.06 -2.15 -1.54 0.82 1.25 1.5 1.64 0.98 0.04 -1.28
AMTR_s00002p00209800 (evm_27.TU.AmTr_v1.0_scaffold00002.215)
-2.43 -0.53 1.53 -0.79 -1.38 -5.13 -0.94 -8.16 -1.55 -1.4 0.84 0.28 0.2 -0.2 -0.48 0.66 0.68 0.89 0.65 1.01 -0.3 -0.29
AMTR_s00002p00241480 (evm_27.TU.AmTr_v1.0_scaffold00002.307)
-0.04 - 1.49 -1.23 -2.37 -3.54 -4.36 - -3.96 -3.66 0.55 0.37 -0.03 -0.9 -0.8 1.44 0.3 1.17 0.96 -0.01 1.21 0.03
AMTR_s00003p00261700 (evm_27.TU.AmTr_v1.0_scaffold00003.347)
-0.01 -0.18 1.23 -1.19 -1.84 -4.06 -4.16 -1.55 -3.54 -3.8 0.77 0.27 -0.37 -1.68 -1.2 1.04 1.21 0.75 0.55 0.28 1.29 -0.27
AMTR_s00003p00270020 (evm_27.TU.AmTr_v1.0_scaffold00003.425)
- - -8.48 -4.28 -1.72 - -8.65 - -9.38 -9.72 1.63 1.18 0.06 -0.33 -0.24 0.21 1.46 1.05 1.15 1.2 1.53 -2.24
AMTR_s00004p00026400 (evm_27.TU.AmTr_v1.0_scaffold00004.10)
-4.15 - 1.56 -1.92 -2.06 -5.31 -8.37 - -5.28 -6.08 1.0 0.41 0.27 -0.54 -1.23 0.97 0.87 1.02 0.91 1.15 0.64 0.37
AMTR_s00004p00128960 (evm_27.TU.AmTr_v1.0_scaffold00004.119)
- -7.53 1.25 -4.03 -0.66 - -5.44 -7.67 -4.82 -5.35 0.85 1.0 0.24 -1.5 0.92 0.65 1.43 0.89 0.55 0.22 0.93 -0.1
-0.02 - 0.98 -5.71 -2.32 - -1.33 -5.09 -0.48 -0.53 0.56 1.09 0.46 0.18 0.17 -0.19 0.14 1.03 0.97 -0.0 0.78 0.06
AMTR_s00008p00153950 (evm_27.TU.AmTr_v1.0_scaffold00008.76)
-0.83 - 0.39 -3.74 -2.28 - -3.96 - -5.09 -4.54 0.32 1.05 0.38 -1.11 0.29 0.66 1.05 0.8 0.54 1.2 1.67 0.09
AMTR_s00009p00268260 (evm_27.TU.AmTr_v1.0_scaffold00009.420)
- - - - 0.34 - - - -4.68 -5.88 0.9 0.57 1.0 -1.64 -1.06 0.88 1.73 -0.21 1.33 0.88 1.81 -0.65
AMTR_s00010p00259620 (evm_27.TU.AmTr_v1.0_scaffold00010.425)
- - - -2.01 -0.53 - -5.02 - -4.07 -3.89 1.21 1.59 0.56 -1.31 -0.84 -0.46 1.6 1.76 1.53 0.57 -0.98 0.12
-0.15 0.08 0.11 -2.19 -0.87 - -1.33 -2.97 -1.27 -1.17 0.34 0.5 0.04 -0.53 -0.74 1.07 1.13 0.18 0.66 1.29 0.68 -0.39
-4.42 - 2.09 -7.47 -2.77 -4.9 -8.79 - -8.07 -7.46 0.69 0.47 -0.17 -1.46 -1.43 0.99 1.29 1.0 0.91 0.85 1.09 -0.69
AMTR_s00016p00084400 (evm_27.TU.AmTr_v1.0_scaffold00016.46)
-4.83 -6.69 1.34 - -1.2 - -1.41 - -0.51 -1.06 0.44 1.19 -0.52 -0.9 -0.02 0.48 1.2 0.91 0.56 0.85 0.89 -0.2
- - 1.74 -6.07 -0.77 -3.08 -6.74 - -2.44 -3.57 0.54 0.08 -0.59 -1.79 -0.92 1.24 1.58 1.02 0.41 0.41 1.62 -0.84
AMTR_s00016p00241430 (evm_27.TU.AmTr_v1.0_scaffold00016.255)
- 1.58 - -3.69 0.17 - -2.59 - -3.49 -4.03 -0.79 0.38 -1.26 -2.78 0.29 1.14 1.38 1.19 0.83 1.23 0.84 -0.26
AMTR_s00016p00259690 (evm_27.TU.AmTr_v1.0_scaffold00016.368)
- 0.46 - -6.54 -1.85 - -3.55 - -2.27 -2.95 1.2 1.64 0.09 -1.6 -1.15 0.59 1.21 1.34 1.15 0.91 0.49 -0.33
AMTR_s00017p00235750 (evm_27.TU.AmTr_v1.0_scaffold00017.195)
0.51 0.19 0.58 -0.16 -1.02 -4.89 -5.11 -9.63 -7.48 -7.23 0.92 0.68 -0.01 -1.16 -1.19 0.59 0.99 1.04 1.14 0.52 0.35 -0.65
AMTR_s00017p00255800 (evm_27.TU.AmTr_v1.0_scaffold00017.280)
-2.93 -0.1 1.36 -7.39 -1.26 -5.8 -1.23 -1.44 -1.31 -1.61 0.5 0.49 0.36 0.66 -0.62 0.82 -0.1 1.21 1.19 -0.02 0.36 -0.99
AMTR_s00022p00142340 (evm_27.TU.AmTr_v1.0_scaffold00022.136)
-0.5 -0.1 1.6 -0.56 -0.78 -4.63 -3.97 -8.16 -4.39 -3.96 0.68 0.47 0.79 -0.62 -0.78 0.81 -0.24 1.27 1.12 -0.35 0.31 -0.53
AMTR_s00024p00194890 (evm_27.TU.AmTr_v1.0_scaffold00024.165)
1.23 0.18 -3.08 -0.35 -1.37 -2.6 -2.77 -4.25 -1.82 -2.03 0.53 0.9 0.32 -0.47 -1.08 0.96 0.59 1.22 0.99 0.5 -0.42 -0.59
-0.51 0.68 0.54 -4.39 -0.19 -1.98 -4.12 -4.04 -3.26 -3.39 0.33 0.21 -0.12 -0.37 -0.03 1.33 0.77 0.68 0.75 0.91 0.72 -0.65
-1.49 -0.62 1.09 -4.83 -0.3 -1.22 -2.18 -3.17 -2.13 -2.13 0.15 0.5 0.22 -0.37 -1.04 1.47 1.26 0.78 0.39 0.2 0.69 -0.18
AMTR_s00029p00204910 (evm_27.TU.AmTr_v1.0_scaffold00029.293)
- - 1.24 - -0.16 - -4.21 -6.68 -4.62 -5.36 1.06 1.08 -0.16 -1.49 0.02 0.84 1.37 1.21 0.84 0.32 0.61 -0.14
-3.04 -2.91 0.7 -0.25 -1.3 - -4.32 -8.78 -3.97 -4.1 1.07 1.23 0.12 -1.01 -1.64 1.15 1.08 1.39 0.91 0.14 0.51 -0.0
-0.73 0.08 0.45 -1.16 -1.17 -5.83 -4.91 -5.79 -3.58 -3.8 0.36 -0.07 -0.02 -0.13 -0.04 1.7 0.79 0.9 0.69 0.76 0.94 -0.55
-0.01 -4.94 1.32 -1.92 -2.3 -4.83 -8.73 -7.85 -8.12 -9.37 0.75 0.72 0.1 -1.39 -1.81 1.29 1.18 1.48 1.03 0.41 0.36 -0.45
AMTR_s00039p00066180 (evm_27.TU.AmTr_v1.0_scaffold00039.27)
1.08 0.15 0.73 -8.91 -1.54 - -2.74 0.1 -1.18 -1.55 0.64 1.05 -1.11 -1.25 -1.71 0.38 -1.14 1.34 0.89 0.08 0.76 0.11
- - - -7.55 -1.44 - -7.15 - -9.24 -6.03 0.38 0.87 -0.47 -1.56 -0.25 1.99 0.83 1.27 0.82 1.64 1.36 -0.04
- -3.23 0.42 -0.83 -0.97 -4.27 -6.43 - -5.77 -5.87 0.84 0.86 0.67 -0.78 -0.88 0.14 1.48 1.14 1.24 1.12 0.06 0.47
AMTR_s00045p00155990 (evm_27.TU.AmTr_v1.0_scaffold00045.170)
1.07 -2.15 0.7 -1.69 0.05 -4.62 -1.29 -0.65 -1.17 -1.27 0.69 0.75 0.34 -0.68 -0.33 -0.05 0.21 0.71 1.03 -0.17 0.05 0.08
-0.79 -4.88 1.23 -1.91 -0.85 -3.15 -7.1 -2.81 -9.19 -7.57 0.95 0.19 0.41 -0.21 -0.88 1.2 1.33 1.21 0.88 0.59 0.22 -1.02
AMTR_s00051p00042220 (evm_27.TU.AmTr_v1.0_scaffold00051.16)
1.24 -3.63 -1.33 -2.74 -3.02 - -4.71 -7.85 -3.97 -3.87 0.46 0.95 0.09 -0.51 -1.25 1.4 -0.03 1.63 1.43 0.56 0.1 0.31
AMTR_s00051p00085060 (evm_27.TU.AmTr_v1.0_scaffold00051.31)
-3.44 - - -1.98 -0.74 - - - -7.15 -7.52 0.92 1.27 0.26 -1.35 -0.45 1.11 1.32 1.43 1.28 0.75 0.92 0.09
AMTR_s00056p00142090 (evm_27.TU.AmTr_v1.0_scaffold00056.117)
0.29 -8.21 0.82 -9.06 -3.87 -6.18 -8.19 - -6.03 -5.65 1.32 1.09 -0.33 -1.06 -0.73 0.4 1.15 1.58 1.15 0.39 0.82 -0.82
AMTR_s00058p00187000 (evm_27.TU.AmTr_v1.0_scaffold00058.183)
- -2.7 - -6.24 0.52 - -2.92 - -1.29 -2.04 0.91 2.14 -0.0 -1.94 0.59 0.19 1.32 0.48 0.97 0.81 -0.44 0.12
0.97 1.4 0.15 -0.89 -1.11 -7.54 -2.36 -4.19 -1.97 -2.36 0.29 0.55 0.44 -1.28 -0.65 0.59 1.05 0.58 0.86 0.05 -0.06 -0.67
- -7.26 1.89 - -3.03 - -9.07 -7.41 -9.44 -7.33 1.25 0.71 -0.67 -2.45 -0.3 0.69 1.84 0.85 1.14 0.06 0.73 -0.72
AMTR_s00061p00169900 (evm_27.TU.AmTr_v1.0_scaffold00061.178)
-0.31 0.82 -0.03 -0.23 -0.39 -6.32 -1.28 -6.0 -1.34 -1.43 0.98 0.76 0.29 0.32 -0.62 0.31 0.77 0.7 0.82 -0.21 -0.2 -0.36
-0.61 -0.43 0.39 -1.29 -0.99 -6.24 -3.44 -6.04 -2.44 -2.34 0.56 0.94 0.1 -0.64 -0.55 1.09 1.01 1.2 1.05 0.78 -0.55 0.25
-0.98 -4.16 1.47 -4.8 -2.54 -5.22 -8.55 -9.32 -7.06 -7.98 0.42 -0.05 -0.1 -0.54 -1.28 1.64 1.02 0.77 0.84 0.9 1.51 -0.48
AMTR_s00068p00031610 (evm_27.TU.AmTr_v1.0_scaffold00068.7)
- - - -5.04 -2.51 - -7.18 - -6.75 -7.01 0.3 0.98 -0.19 -2.65 0.09 1.57 1.34 0.78 1.12 1.46 1.83 -0.42
1.09 0.45 -0.74 -2.19 -1.7 -1.33 -4.56 -9.83 -4.4 -4.04 0.85 0.72 0.05 -0.42 -1.25 1.12 0.06 1.2 0.93 0.61 0.2 0.14
AMTR_s00097p00038600 (evm_27.TU.AmTr_v1.0_scaffold00097.9)
-0.88 -0.39 1.31 -3.04 -0.58 -4.65 -4.19 - -4.87 -4.63 0.62 0.61 0.47 0.05 -1.68 1.08 1.27 0.86 0.76 0.41 0.38 -0.32
AMTR_s00101p00152470 (evm_27.TU.AmTr_v1.0_scaffold00101.128)
-0.33 0.36 0.86 -0.52 -0.28 -1.44 -0.71 -3.06 -1.39 -1.21 0.87 0.6 0.34 -0.24 -0.87 0.85 0.74 0.67 0.82 -0.6 -1.39 -0.3
AMTR_s00129p00053890 (evm_27.TU.AmTr_v1.0_scaffold00129.27)
- - - - 1.22 - -5.4 -5.36 -7.88 - 0.42 0.53 -0.12 -2.08 0.6 0.96 1.59 1.18 0.65 0.99 1.25 0.02
AMTR_s00130p00078720 (evm_27.TU.AmTr_v1.0_scaffold00130.36)
-0.57 -0.7 0.28 -0.29 -0.73 -5.95 -3.12 -8.18 -2.9 -3.02 1.37 0.94 -0.43 -1.83 -1.69 0.54 1.46 0.9 0.98 -0.27 1.01 -0.03
AMTR_s00137p00067410 (evm_27.TU.AmTr_v1.0_scaffold00137.29)
-4.99 - - -2.73 -0.13 - -2.39 -3.99 -0.87 -1.69 0.73 1.1 -0.17 -1.2 0.67 0.91 1.28 1.15 0.5 0.84 1.25 -0.06
AMTR_s00153p00079500 (evm_27.TU.AmTr_v1.0_scaffold00153.43)
- - -7.3 -6.08 0.1 - -5.18 - -2.74 -3.22 0.88 1.14 0.6 -1.08 1.23 0.74 1.53 0.7 0.62 0.93 0.76 -0.12
- - - -3.34 -0.8 - - - -6.93 - 1.26 1.82 -0.45 -3.34 -1.66 1.13 1.52 1.63 1.67 0.43 -0.53 -0.16
AMTR_s00182p00046810 (evm_27.TU.AmTr_v1.0_scaffold00182.26)
-6.44 - 1.29 -4.08 -0.98 -5.24 -7.26 - -6.14 -5.82 0.94 0.99 -0.02 -0.83 0.45 1.28 0.97 1.24 0.59 0.41 0.92 -0.67

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.