Heatmap: Cluster_203 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots (apex), 7 DAG
Roots (differentation zone), 4 DAP
Roots (elongation zone), 4 DAP
Roots (meristematic zone), 4 DAP
Roots (stele cells), 7 DAS
Roots (tip)
Leaves (rosette), 21 DAG
Leaves (rosette), 29 DAG
Leaves (rosette), 35 DAG
Leaves (rosette), 42 DAG
Leaves (rosette), 57 DAG
Epidermis cells
Mature guard cells
Stems (internode)
Stems (internode), senescent
Meristem (M1-3), 7-9 DAG
Meristem (M4-6), 1-12 DAG
Meristem (M7-1), 13-16 DAG
Axis of the inflorescence
Pedicel
Flowers (receptacles)
Flowers (floral buds)
Flowers (sepals)
Flowers (petals)
Flowers (stamen filaments)
Flowers (anthers)
Flowers (carpels)
Flowers (ovules)
Stigmatic tissues
Pollen
Siliques
Siliques, senescent
Pods of Siliques
Pods of Siliques, senescent
Embryo
Endosperm
Seeds, dry
Seeds, from senescent siliques
Seeds, young
Seeds, germinating
Seedlings, 5 DAG
Seedlings, 11 DAG
Seedlings, 14 DAG
Seedlings, etiolated
- - - - - - -4.09 - -5.67 -4.55 -4.08 - 2.16 - - - - -5.74 - - -7.28 1.84 - -5.71 -2.52 4.38 -4.71 - - 3.74 -5.13 -3.51 - -0.01 - -5.33 - - -4.41 -3.29 -6.53 - - -
- - - -4.57 - - - - - -6.31 - -3.11 - - - -2.76 -1.21 -0.55 -6.14 - -1.43 2.57 -6.05 -6.2 -3.97 3.59 -0.57 -1.1 0.12 3.9 -0.5 -5.23 -2.79 -3.87 -2.28 2.24 - - -0.04 -4.94 - - -4.81 -5.08
-1.95 -0.29 -0.07 -2.83 - -1.33 -5.92 -5.17 -5.01 -4.81 - - - -1.95 -5.57 -2.84 -1.77 0.11 -2.39 -5.1 -3.94 2.13 -5.91 -5.54 -4.75 3.92 -3.76 -6.41 -4.35 4.03 -3.55 - -5.01 -3.23 -0.64 - - - -4.49 0.67 -3.29 -3.84 -2.58 -1.37
AT1G19890 (MGH3)
- - - - - - - - -6.92 -7.83 - - - - - - - -6.89 - -6.59 -3.89 1.76 -7.1 -6.2 -3.67 3.83 -2.91 - - 4.69 -4.24 -6.23 -5.45 -4.12 -5.98 - - - -4.05 - - - - -
AT1G28335 (LCR31)
- - - - - - - - -7.87 -7.32 - - - - - -9.72 - -6.16 - -6.82 -5.74 -0.13 -5.68 -5.14 -3.2 4.96 -4.23 - -7.88 3.5 -3.87 -5.26 -4.91 -2.34 - - - -6.7 -4.07 - -8.64 - - -9.63
1.09 2.66 1.08 -2.89 - -1.82 - - - - - - - - - - -8.26 - - - -4.83 1.28 -5.77 -4.31 -3.67 3.88 -3.98 - - 3.78 -3.74 - -5.25 -2.06 - -1.83 - - -6.63 -0.62 -3.46 - -2.59 -1.93
- -0.19 -4.06 - - - - - -5.57 -5.61 -2.23 - - - - -2.75 - -5.26 - -3.91 - 1.65 - - - 5.02 - - - 2.6 -3.64 - - - - -4.96 - - - -3.72 -0.92 - -4.18 -2.5
-6.1 -3.98 -6.24 -4.6 - -6.43 - -6.92 -5.0 -4.28 -4.75 -6.02 -3.32 -2.12 -1.73 -5.3 -4.86 -4.93 - -5.86 -3.12 1.69 -6.63 -5.74 -3.56 3.65 -2.32 -2.13 -4.78 4.26 -1.19 -4.55 -1.32 -0.54 -4.43 2.38 -3.64 -5.51 -1.75 -4.63 -7.97 - -5.85 -5.31
AT1G55570 (sks12)
- - - - - - - -10.4 -6.05 -5.52 -8.84 - - - -8.91 - -9.97 -6.84 -11.34 -8.02 -4.05 2.22 -6.74 -5.64 -3.56 4.04 -3.66 -8.16 -9.49 4.47 -3.86 -5.93 -4.84 -2.59 - -9.07 -8.81 -9.97 -4.15 -10.12 -12.35 - -10.59 -13.18
AT1G63930 (ROH1)
0.53 1.71 0.38 -3.42 - -0.68 -3.46 - -7.19 -5.22 -8.0 -2.07 - -6.98 - -8.03 -6.74 -6.63 -6.37 -5.73 -4.11 1.47 -5.0 -6.56 -5.61 3.71 -3.86 -5.0 -6.47 4.2 -3.47 -5.37 -4.04 -2.47 -2.83 -3.16 -5.66 -5.76 -4.52 -0.11 -1.77 -4.0 -2.44 -2.35
- - - - - - -5.53 - - - - - - -5.03 - - -3.76 -7.45 - - -6.47 3.56 -5.98 -4.15 -3.37 4.73 -5.13 - - 2.39 -4.0 - - - - - -5.49 - - - - - - -6.89
AT1G69940 (PPME1)
- - -12.42 - - - - -13.35 -8.23 -7.4 -12.35 - - - -9.01 -13.37 -11.55 -6.99 -12.28 -7.34 -5.57 2.55 -6.89 -6.14 -3.94 4.23 -4.29 -9.27 -8.58 4.24 -4.71 -5.1 -5.67 -3.02 - -6.84 -4.93 -6.23 -5.32 -9.24 -13.3 - -11.53 -9.72
-4.82 - -3.69 - - - - -7.99 - -6.63 -7.72 - - - - - - - - -6.36 -5.98 2.98 -5.97 -4.08 -3.96 4.2 -4.02 - -6.18 4.1 -4.2 - -6.96 -3.44 - -6.38 - - -8.29 -8.08 - - - -4.99
AT1G78980 (SRF5)
- - - - - - - - - -5.32 - - - -4.6 -4.5 - - - - - -6.09 3.0 - - - 4.37 -3.29 - - 3.9 -4.68 - -5.66 -3.62 - - - - -5.91 - - - - -6.38
AT1G79250 (AGC1.7)
-1.02 1.55 -2.05 - - -6.89 - -8.82 -7.91 -7.85 - - - -7.11 -7.03 -9.39 -9.7 -6.66 - -6.32 -5.87 1.96 -6.57 -4.69 -2.93 4.13 -3.69 - - 4.14 -4.71 -7.22 -5.27 -3.4 - -4.12 - - -5.81 -1.13 -3.82 - -3.14 -3.91
AT2G18080 (EDA2)
- - - - - - - - - - - - - - - - - - - - -5.6 2.63 -5.8 - - 4.32 -3.66 - - 4.14 -3.98 - -5.33 - - - - - -4.86 - - - - -
AT2G19770 (PRF5)
- -5.4 -8.0 - - - - -9.46 -6.66 -6.9 -10.52 - - - -8.76 - - -6.33 - -5.89 -5.6 1.55 -6.51 -5.02 -4.44 4.27 -3.89 -6.7 -6.91 4.41 -4.43 -6.54 -5.35 -2.75 -5.45 -8.28 -7.16 - -4.93 -7.18 -9.66 - - -
- - - - - - - - -7.03 -8.11 -8.98 - - - - - - -8.72 - - -5.02 2.38 -7.13 -6.51 -2.24 4.35 -4.94 -6.39 - 4.15 -4.35 -5.73 -4.78 -2.46 - -6.73 - - -4.81 -9.99 - - - -
AT2G23660 (LBD10)
- - - - - -7.24 - - -6.73 -5.18 -7.18 - - -6.49 -5.65 -6.1 -7.3 - - - -3.43 1.81 -5.43 -6.68 -3.12 3.93 -2.87 -5.48 - 4.6 -3.19 -5.7 -4.44 -2.27 - -7.5 -2.87 - -4.6 -8.15 - - -6.74 -
0.56 2.08 1.55 0.42 - 0.37 -3.06 -3.55 -2.41 -3.23 -3.31 -4.16 -2.31 -1.83 -2.27 -2.6 -2.75 -1.93 -1.1 -2.02 -1.37 0.93 -2.63 -2.41 -1.76 3.2 -0.43 -0.11 -1.46 3.33 -2.57 -1.78 -2.59 -2.53 -0.06 -2.47 -1.03 -1.66 -1.21 0.12 -1.29 -4.03 -0.81 -0.8
AT2G30240 (CHX13)
- - - - - - - - - - - 0.49 - - - - - - - - - 2.83 - - - 5.01 -6.26 - - 1.7 - - - - - - - - - - - - - -
- -6.68 -9.28 - - -10.03 - -11.21 -9.0 -6.84 -7.11 - -4.15 - -7.23 - - -6.37 - -6.75 -5.58 3.63 -5.76 -5.55 -3.73 4.51 -4.52 -9.14 -7.82 3.03 -5.03 -5.78 -6.92 -1.81 - -10.14 -8.61 - -5.99 - - - -9.4 -
- - - - - - - -4.97 - -5.03 -4.09 - - - - - - - - - - 1.75 - - -2.62 4.19 -3.73 - - 4.42 -2.28 - -4.29 -2.43 - - - - -3.47 - - - - -2.56
AT2G33670 (MLO5)
- - - - - - - - -7.69 -5.9 - - - - - - - - - - -5.49 2.63 - -5.95 -6.1 4.4 -3.56 - - 4.0 -4.53 -5.84 -6.82 -5.66 - -3.03 -3.9 -3.83 -4.31 -4.57 -6.55 - - -6.61
AT3G01020 (ISU2)
- - - - - - - -6.9 -6.86 -5.9 -6.81 - - - - - - -7.5 - - -3.75 2.16 - - -3.26 3.95 -3.19 -3.63 - 4.4 -1.78 -4.36 -3.1 -3.36 -5.05 0.7 -5.68 - -2.1 -7.34 - - - -
AT3G02440 (TBL20)
- - - - - - - - -7.79 -6.24 -7.74 - - - - - - - - - -4.43 2.76 - - -6.48 4.31 -3.26 - - 4.09 -3.77 -5.23 -5.21 -2.89 - - - - -6.63 - - - - -
AT3G22650 (CEG)
- - - - - - - - - - - - - - - - - - - -5.45 -6.63 3.05 - -6.2 - 4.19 -3.98 - - 4.1 -4.09 -6.1 -6.06 -6.16 - - -3.67 -6.57 -4.98 - - - - -
- - - - - - - - -8.46 -8.26 -11.93 - - - -10.1 - -11.48 -6.66 - -6.72 -6.95 2.32 -6.88 -6.86 -4.2 4.58 -4.53 -9.61 -7.45 3.88 -5.46 -7.91 -6.63 -4.11 - -10.97 -10.67 -10.76 -5.71 -10.65 -12.22 - -9.45 -
-12.48 -11.71 - - - - - -12.66 -8.09 -7.5 -10.35 - - - -9.09 -14.68 -11.42 -6.73 -10.96 -6.7 -6.04 2.07 -6.47 -6.26 -4.1 4.5 -4.01 -8.59 -7.49 4.06 -4.53 -7.08 -5.74 -2.96 - -6.91 -8.97 -9.59 -5.08 -9.5 - - -9.84 -13.4
-10.8 -10.61 - - - - - -11.61 -8.22 -7.07 -10.6 - - - -8.46 -10.82 -10.34 -6.7 -10.88 -6.52 -5.76 2.29 -6.43 -6.11 -3.8 4.39 -3.67 -8.02 -7.36 4.13 -3.87 -6.13 -5.01 -2.38 - -6.16 -8.49 -9.43 -4.76 -9.03 -13.28 - -10.42 -
- -4.15 -2.32 -2.86 2.94 -4.83 -3.17 -2.88 -0.63 -0.72 -0.84 -1.01 - -2.69 -0.53 -1.08 -3.62 -3.62 -3.42 -2.27 -2.94 1.82 -3.24 - -2.85 3.05 -2.66 -4.02 -3.13 4.04 -3.12 -4.24 -3.25 -2.07 -0.95 -0.2 -2.17 -5.58 -4.09 -3.74 -3.98 -3.03 -3.28 -3.79
AT3G48010 (CNGC16)
-2.04 -0.34 -1.86 - - -5.67 -2.8 -6.51 -4.7 -2.86 -3.49 - - 1.38 -1.38 -4.21 - - - -4.36 -4.44 1.87 - -3.04 -3.05 3.8 -3.34 - -4.07 4.08 0.0 -2.05 -0.09 -0.09 -3.75 -2.45 -0.92 -5.47 -4.0 -3.87 - - -4.17 -5.16
- - - -4.67 - - - - -6.21 -7.55 - - - - - - - -6.41 - - -4.43 2.52 -6.89 -4.68 -2.69 4.36 -3.02 -0.66 -7.09 4.01 -3.33 -7.05 -4.3 -2.62 - -5.59 - - -2.69 -8.44 -7.85 - - -
AT4G13075 (RALFL30)
- - - - - - - - -6.32 -5.85 -9.39 - - - -7.96 - - -6.52 -7.8 - -5.22 0.19 -6.16 -6.99 -2.59 4.8 -3.76 - -8.06 3.81 -3.04 -5.35 -4.36 -2.0 - - - - -3.21 - - - - -
AT4G13560 (UNE15)
-8.75 -7.51 -8.52 - -1.63 -11.28 -3.84 -5.26 -5.26 -6.07 -6.2 -8.3 - -6.47 -5.31 -7.89 -6.09 -5.7 -9.39 -6.54 -5.6 2.33 -6.07 -6.6 -3.55 4.44 -3.92 - -6.95 3.99 -4.25 -5.2 -5.48 -2.81 -9.23 - -6.77 -7.05 -4.77 -7.38 -4.27 -3.71 -3.05 -8.76
- -4.9 -6.12 -5.2 - -6.93 -9.53 -7.98 -7.17 -6.24 -8.14 -6.93 - -7.2 -8.05 -8.01 -8.94 -6.04 -5.4 - -4.73 0.08 -5.59 -5.15 -3.27 4.6 -3.22 -6.02 -6.62 4.14 -3.24 -4.8 -4.31 -2.15 -4.22 -6.64 -7.68 -6.63 -3.57 -8.45 - -6.71 -6.58 -8.01
- -5.85 -5.27 -7.74 - -9.2 -4.13 -5.2 -5.49 -4.99 -5.97 - - -4.13 -5.75 -8.94 -7.82 -6.04 -7.28 -6.71 -4.94 1.59 -7.73 -5.42 -4.56 4.58 -3.68 -5.73 -7.47 4.0 -3.5 -5.01 -3.85 -2.46 -5.15 -3.74 -5.2 - -4.73 -8.33 -7.52 -5.0 - -6.17
AT4G36070 (CPK18)
- -2.53 - - - - - - -4.19 -3.25 -4.03 -3.31 - -3.39 - - - - - - -3.74 2.67 -4.36 1.27 0.38 3.55 -3.42 - -3.46 4.35 -3.79 - -5.41 -2.43 -3.24 -2.43 - - -1.87 -5.07 - - -3.66 -
-1.95 -5.28 -2.37 -2.63 - -3.82 -2.79 -5.27 -5.63 -4.55 -4.49 - - -2.57 -5.18 -3.02 -3.09 -3.09 -3.61 -2.66 -1.72 1.32 -3.11 -0.96 -0.92 3.79 -2.37 -1.99 -2.07 4.35 -1.72 -2.77 -3.04 0.18 -1.45 -1.07 -5.09 -5.71 -1.98 -2.6 -3.65 -3.73 -3.06 -2.81
-1.84 -2.1 -1.95 -1.43 -2.87 -1.73 -1.84 -2.08 -1.78 -1.79 -1.84 -3.62 -4.1 -1.36 -1.56 -1.91 -2.0 -1.83 -1.75 -1.49 -1.47 1.43 -1.67 -1.96 -1.83 4.23 -1.21 -1.62 -1.8 3.51 -1.62 -2.44 -1.64 -0.95 -1.98 -4.06 -3.05 -3.11 -1.63 -1.91 -1.72 -2.01 -2.0 -1.7
AT5G11440 (IPD1)
0.59 1.58 2.6 - - -1.13 -7.56 - -6.84 -5.75 -6.08 - - -5.05 - -5.93 -8.12 -6.54 -7.06 -5.91 -5.3 2.08 -7.21 -5.57 -4.47 4.34 -4.43 -5.47 -6.11 2.75 -4.01 -7.27 -5.29 -4.22 - -3.84 - - -6.33 -0.28 -3.8 - -1.97 -3.45
AT5G13990 (EXO70C2)
0.84 1.1 0.93 -4.21 -2.64 -0.51 -9.46 -6.78 -5.23 -4.66 -5.63 -0.21 - -3.74 -3.8 -3.99 -4.4 -5.97 -5.03 -7.4 -4.37 1.14 -7.59 -7.11 -4.24 3.54 -3.35 -5.37 -8.22 4.31 -3.78 -6.54 -4.31 -3.08 -2.49 -4.28 -7.84 - -4.38 -0.44 -2.72 - -2.39 -1.03
-0.04 1.41 0.93 -4.72 0.87 -2.17 - - -7.08 -5.43 -8.1 - - -5.28 -3.78 - -8.42 -6.57 - - -5.52 2.13 - - -4.71 3.71 -3.11 -2.13 - 4.06 -3.65 - -4.25 -2.66 -4.13 -3.28 - - -3.76 0.03 -5.57 - -3.38 -4.62
- - - - - - - - - -4.8 - - - - - - - - - - - 1.67 - - -4.02 4.45 -3.58 - - 4.19 -4.13 -4.9 -5.69 -1.71 - - - - -7.0 - - - - -
AT5G57320 (VLN5)
-6.24 -3.25 -3.07 -3.72 - -4.96 -4.07 -3.2 -2.08 -2.16 -1.98 -2.55 -3.54 -2.12 -0.3 -2.87 -2.85 -2.19 -2.68 -2.3 -1.84 1.79 -3.52 -3.17 -3.06 3.99 -1.88 -2.84 -2.63 3.95 -1.58 -1.67 -2.26 -1.26 0.04 -0.74 -2.52 -2.14 -2.27 -1.19 -2.81 -3.13 -2.38 -1.84
AT5G61690 (ATH15)
- - - - - - - - - - - - - - - - - -7.16 - - -0.13 3.36 -5.95 - - 4.13 -4.07 - - 3.92 -4.76 - -6.83 -3.35 - - - - -7.16 - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.