Heatmap: Cluster_40 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
0.75 4.81 - - - - - - 1.3 -0.42 2.68 - - 3.02 - - - -0.85 - - - - - -0.19 - - - - - - - - - - - - - - - - - - - - - - - - -
1.45 3.67 -0.28 - -1.52 - -2.47 - - 1.02 1.94 2.15 -0.59 - - - -2.66 -1.92 - 1.43 -0.77 1.92 -0.32 0.56 - - - 0.97 - - - 1.15 - - - - - - - - -2.18 -2.03 -0.39 0.23 0.13 0.46 1.28 - -
-2.49 0.64 -4.35 - 0.27 2.45 -3.25 -0.87 - -0.4 1.08 -0.72 -1.19 - - 2.45 -2.88 -1.21 - 0.91 -3.94 -1.74 -2.96 -3.68 3.71 3.26 0.38 - - -1.05 - - - - - - - - - -2.03 -1.47 -2.34 -1.03 0.48 -1.46 - - - -
-0.58 4.24 -0.73 - - 4.15 - 1.25 1.63 - 1.27 - - - - - - -0.89 - -1.4 - -2.76 -0.64 - - - - - - - - -0.27 - - - - - - - - -1.3 -2.3 - - - - - - -
-0.46 2.69 - - - - -2.21 - 1.33 -4.03 1.11 - - -1.59 - - - -4.84 5.08 - -4.39 -4.44 - -4.41 - - - - - - - - - - - -0.6 - - - - -4.02 - - -2.9 -0.21 -0.25 - - -
1.87 2.68 - - - 2.89 - -3.76 1.78 - -0.4 - - 0.36 1.59 - 0.96 0.33 2.3 -0.45 - - -3.95 - - -0.96 0.88 - - - - - - - - - - - - - - - - - 3.09 1.67 - - -
4.22 3.29 -0.94 0.55 - 2.72 -0.26 0.45 -0.63 0.5 1.65 -0.3 -0.7 -1.23 - - -3.32 -2.29 - - - -3.34 - - - 0.06 - - - - - -1.76 - - - - - - - - - - - - - - 0.04 - -
2.69 3.75 -1.34 - -0.03 1.56 - - 2.8 0.56 2.16 0.16 - - - - - -1.06 - - -2.85 -3.46 -2.27 - - - - - - 1.85 1.69 - - - - - - - - -1.72 - -2.14 - -2.3 - - 1.14 - -
1.55 3.38 -0.1 -0.49 - - - -0.36 - -0.02 2.1 0.29 0.52 1.04 - - - - - 2.9 - -1.0 -0.02 0.06 - 1.76 - 2.08 - - - - - - - - - - - -1.87 0.61 - 0.28 1.39 - - - - -
-1.1 4.72 - - - - - - - - 1.01 - - 3.53 - - - - - - - - -2.47 -0.45 - - - - - - - - - - - - - - - - - -1.06 - -2.75 - 0.87 0.87 1.77 -
2.12 3.91 - - - - - - 2.67 1.63 3.1 0.79 - 2.57 - - - - - - -1.46 - - -0.87 - - - - - - - 1.44 - - - - - - - - - - - -1.94 - - - - -
-1.96 2.41 -2.8 -2.07 -4.04 0.4 0.89 1.7 2.63 -2.88 0.88 2.06 0.63 -0.23 - - -3.3 -1.76 3.01 -0.45 -2.38 -3.64 -3.36 -0.64 - -0.68 2.32 -1.43 -1.48 0.32 - 1.52 - - - - - - - -4.07 -2.0 -3.6 -2.09 -0.83 - - - - -
- 3.62 - - - - - - - 3.25 4.55 1.68 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -0.78 - - - - -
1.61 2.68 -1.1 - - 2.87 0.16 -0.74 - -3.3 1.09 -1.3 -1.18 - 1.32 1.29 0.9 -1.1 - -2.57 -1.87 -2.27 -3.29 -0.84 2.39 1.5 - - 0.1 - - -0.76 - - - - - - - -0.9 -0.51 -2.47 0.4 0.8 0.73 - - 0.76 -0.24
-4.34 1.81 -3.46 - - - 0.86 1.35 0.16 - -0.46 -2.54 1.15 2.35 1.02 0.08 -2.12 1.15 3.34 0.28 -0.8 -2.55 -1.85 -1.69 - -1.31 -0.32 -1.09 - - -1.02 -0.36 - - -1.02 -1.12 - -0.32 0.94 -1.3 -1.71 -0.22 -0.74 -1.31 -1.3 -1.73 - - 1.83
-0.63 -0.81 -1.89 - 4.52 0.61 0.2 1.02 - - 2.9 - - 3.28 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -1.48 1.21 - - - -
0.5 2.56 -1.14 -1.98 - 3.26 -0.53 -1.26 -1.36 2.41 2.24 0.25 - 0.72 - - - 0.78 - -2.42 -1.69 -3.42 -3.1 -2.31 1.66 0.09 - - - - - -0.54 - - - - 0.29 - 0.19 - - - -1.54 -0.31 0.07 - 2.0 -0.11 -
1.84 2.93 -1.22 -2.92 - 0.33 -0.63 -0.28 0.47 -0.93 1.43 - -0.91 -1.96 - - -0.54 -1.45 - -0.24 0.11 0.12 0.5 -1.06 - 0.06 0.23 2.39 - 1.08 - 0.36 -0.53 - -0.5 1.4 -0.67 - - -1.19 -1.16 -2.32 -0.23 -1.63 1.64 1.17 - - -
-3.85 3.19 -3.57 - - -1.44 - - - - 1.17 - -1.2 1.56 - 0.76 - -1.42 - -0.63 -0.16 -1.05 -0.72 -1.37 -0.54 1.23 1.43 2.43 - 1.2 - 2.17 -0.58 - - -0.3 -9.08 1.03 0.08 -0.87 0.83 1.12 0.57 -2.83 - - - - -
-3.18 1.49 - - - - -2.06 -0.16 - - 1.25 -1.44 - - - - -3.15 -5.14 3.6 -5.05 - -1.96 - - 1.45 - - - - - - -2.75 - - - - - - - - - - - -1.31 0.34 0.57 3.59 2.48 2.58
0.67 3.7 1.75 -0.12 1.47 4.34 0.9 -0.97 - -0.21 1.61 - - - - - -1.11 - - -2.25 - - - - - - - - - - - - - - - - - - - - - - - -3.05 - - - - -
-2.13 4.7 - 0.41 0.18 - - - - 1.65 2.76 - - - - - - - - 1.64 - -1.08 - - - 2.64 - - - - - - - - - - - - - - -0.8 - - - - - - - -
-0.1 1.49 - 3.23 1.91 -1.33 1.05 1.82 -0.85 -0.88 1.68 - 0.28 -1.9 - -0.34 - -0.61 - 1.51 -3.83 -3.52 - 0.96 0.77 1.04 -0.14 - - 0.31 -1.44 0.19 -1.47 - - - -0.5 -1.74 - -5.27 - -3.73 -3.16 0.69 -1.94 - 1.47 -2.0 -
1.46 2.54 0.17 - - 0.53 -0.02 1.04 -2.46 -0.67 2.2 - - -1.4 - - -0.37 -0.37 - -0.2 -0.84 -1.51 -1.46 -1.91 - -0.75 - -0.39 1.19 0.86 - -0.72 - - -0.05 1.17 - -0.62 -0.57 -0.57 0.21 0.0 0.91 0.55 2.11 0.69 0.32 -0.87 -0.78
1.77 3.48 0.17 - -3.59 - 0.79 1.6 0.51 -1.12 1.86 -0.31 0.8 1.75 - 0.19 -0.08 0.87 - 0.04 -1.88 -3.71 -1.89 -1.9 - - - -0.98 - -0.74 - -2.9 - - -0.65 - - 0.91 - -1.49 -1.33 -1.58 -3.69 0.42 1.06 1.52 - - -
1.91 1.31 0.19 - - - -2.68 -0.66 1.18 -0.62 1.27 - 0.49 1.0 -0.62 - 0.41 0.45 1.07 -0.2 - - -5.41 -3.85 3.14 2.6 2.86 - - - - -3.7 - - - - - - - -5.38 - - - -0.16 -0.7 0.04 -1.07 -1.17 -
0.31 1.96 1.07 - 1.0 0.82 - - - 2.6 3.86 - - - - - - - 3.06 0.26 - - - - - 2.98 - - - - - - - - - - - - - - - - - - - - - - -
1.34 2.29 -1.08 - - 0.5 -0.06 -0.12 -2.74 -2.67 1.02 2.43 -2.54 -0.58 -0.05 0.97 -1.29 -1.24 1.64 0.9 -3.97 -2.75 - -3.09 2.07 0.08 -0.38 - - - - -0.73 - - - -1.2 - - - - -4.83 - - 0.79 2.7 1.71 -1.32 - 0.2
0.77 3.86 - 1.47 - - -1.59 - 1.27 0.5 3.91 - - 1.82 - - -1.84 -0.79 - -0.98 - - -1.28 - - - 1.45 - - - - - - - - - - - - - - - - -2.27 - 1.35 - - -
-4.07 0.29 - - - - -0.07 -2.12 -0.6 1.52 1.0 -3.12 -1.06 -1.86 - - -0.57 -2.23 1.35 - -4.3 -1.99 -4.9 -4.72 - - - - - - - - - - -0.16 - - -0.14 - - - - - -0.56 1.25 -0.95 3.1 3.49 3.48
- 1.92 - -0.52 - - - - - -0.95 2.67 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.5 2.6 3.77 3.62 - -
-0.38 3.91 1.93 - - - - - - - 2.99 - - 1.61 - - 0.71 - - - - - 0.41 0.77 - - - - - - - 2.17 - - - 3.06 - - - -3.39 -0.4 - - - - - - - -
-2.3 3.3 - -0.95 - 1.21 3.48 - 0.1 3.21 1.98 0.97 - - - - - -1.74 - - -3.22 -3.63 -2.61 -1.76 - - - 0.47 - - -0.04 - - - - - - - - -2.0 - - -2.34 - 0.82 1.7 - - -
-1.1 2.33 0.37 -1.01 - -1.38 -1.94 1.05 - 0.74 0.61 -1.33 -4.04 1.93 0.04 -0.42 -0.98 -1.17 - -1.89 -0.75 -4.45 -0.63 -2.92 - - -2.03 -1.89 -0.87 0.64 -1.46 0.54 0.7 -1.37 -1.35 -1.08 -1.08 -1.3 -0.67 -1.34 -1.38 -1.0 -2.09 1.06 3.44 1.62 -2.3 -2.64 -1.25
-0.6 1.87 0.8 - - - - - 0.29 - 1.77 2.15 - 2.04 - 3.18 - 0.54 - - - -13.62 - 2.65 - - - - - - - 2.42 - - - 1.84 - - - -1.88 -0.35 - - - - 1.59 - - -
0.42 2.89 -2.53 - - - - - -0.35 -0.3 1.63 -0.14 - - - - - 1.17 - -2.33 -2.97 - - -2.79 - 0.55 3.68 - - - - -2.08 -0.12 - - - - -0.39 - - - - -2.84 -0.4 -0.8 -1.23 3.09 2.03 0.03
2.01 -0.27 - - - 2.38 - - 0.08 -0.41 2.11 4.63 - - - - - -1.65 - -0.32 - -0.8 - - 2.12 - - - - - - - - - - - - - - - - - - - - 1.0 - - -
1.04 3.83 -0.07 -0.46 - 0.1 0.72 1.39 0.05 -0.25 0.79 - -0.29 -0.67 - - 0.88 0.4 - 1.35 -1.4 -1.25 - -3.17 - 2.12 0.55 - - - - -1.2 - - - 0.73 0.63 - 0.53 - -1.48 - -0.14 -0.79 - - - - 0.32
-1.01 4.19 - - - - - - - 3.6 4.18 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
3.14 2.37 0.6 -2.47 - -0.94 1.1 0.82 - -0.99 1.96 - 0.88 -0.14 - - 0.73 1.47 - 0.09 -3.94 -1.8 -2.32 -1.65 2.29 - 0.68 - - 0.12 - 0.05 - - - - -0.01 2.07 - - -3.48 -2.3 -1.77 -0.01 - - - - -
2.97 3.82 -2.72 - - 1.13 - - 1.56 3.31 3.26 - - -0.22 - - -1.79 -2.88 - - - -1.07 -2.95 - - - - - - - - - - - - - - - - - - - -1.98 -3.31 - - - - -
0.22 3.85 -0.91 - - - - - 0.39 -2.29 3.33 -0.28 - - - - 1.35 2.1 - -2.21 0.18 - 0.71 -1.18 - - - - - 1.15 - - - - - 1.14 - 0.93 - 0.38 0.88 - -0.64 -2.74 - - - - -
-0.89 2.93 - 0.13 2.27 - - -2.35 -0.02 -2.6 0.79 - 1.23 1.5 1.98 - - 0.76 - 1.63 -1.92 -1.33 - -2.64 2.15 - - - - 2.69 - -1.05 - - 1.19 - - 0.63 - -1.81 -0.53 -0.69 -1.85 - - - - - -
2.4 3.71 -0.02 - - - -0.34 0.93 -0.64 - 0.06 - 2.28 1.63 - - 2.16 2.16 - -1.4 - -2.44 - - 1.48 - - - - - - - - - - - - - - - - - - 1.25 - - - -0.34 0.9
-0.67 3.35 - 2.82 4.08 - - 0.06 - 0.81 3.5 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.37 3.43 0.46 - - - - - - -1.86 1.75 3.13 - - - - - -2.3 - - -2.21 -0.6 -0.64 - 2.89 - 1.48 - - - - - - - - - - - - - - - - - 2.24 2.71 - - -
0.3 2.73 - - - - -1.03 - -0.56 4.01 2.59 -0.41 - - - - - -0.79 - 2.11 -0.29 - -0.97 -1.67 - - - - - - - - - - - 2.78 - - - -0.78 -0.83 0.25 -1.38 -0.03 - - - - -
-0.76 2.94 -1.56 -1.55 -0.63 5.23 - -1.41 - - 0.22 - - - - - - -1.49 - - - - - - - - - - - - - - - - - - - - - - - - - -3.49 - - - - -
2.77 4.04 - - - - - - - - 1.77 - - - - - -2.04 0.36 - - - - - - - 3.4 2.24 - - - - - - - - - - - - - - - - - 1.15 1.72 - - -
2.79 3.49 0.34 0.62 -0.28 1.36 0.92 1.6 -1.44 0.24 0.08 -10.09 -1.3 0.22 - 1.04 2.26 2.7 - -1.36 - -3.89 -3.65 -2.26 - -1.45 -4.1 - - - - - - - - - - - - - -4.91 - - -2.25 -1.11 - - - -1.71
- 4.69 - - - - - - - - 4.54 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.69 3.8 - - 1.48 - - - - 1.43 2.9 1.95 2.99 - - - -1.03 0.27 - -4.55 - - - - - - 2.28 - - - - - - - - - - - - -0.92 - - - - - - - - -
1.9 2.8 -0.18 -0.49 - 2.7 2.33 -0.81 0.71 -0.12 1.1 - - -0.6 - - 0.84 1.29 - -0.96 -2.25 -3.4 -3.28 - - 0.05 - - - - - -0.51 - - - - - - - -2.24 -0.4 -0.42 -0.21 0.99 0.1 -0.31 1.12 1.9 -
0.94 1.7 -0.52 3.03 2.56 1.87 -0.5 0.04 - -0.97 1.37 - 0.92 1.2 - - -0.18 0.46 - -1.46 - - - - 0.41 - - - - - - - - - - - - - - - -5.17 - - -1.31 3.36 0.39 -1.07 - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.