Heatmap: Cluster_36 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00132240 (evm_27.TU.AmTr_v1.0_scaffold00001.107)
- - - - 3.66 - - - - - - - - - - - - - - - - 3.22
AMTR_s00001p00150600 (evm_27.TU.AmTr_v1.0_scaffold00001.133)
- - - - 3.91 - - - - - - - - - - - - - - - - 2.8
AMTR_s00001p00188360 (evm_27.TU.AmTr_v1.0_scaffold00001.186)
- - - - 2.75 - 0.6 - -3.09 -0.96 2.06 - -1.22 0.07 -1.0 - 1.08 - - -1.97 1.87 -0.06
AMTR_s00001p00233850 (evm_27.TU.AmTr_v1.0_scaffold00001.254)
- - - - 2.83 - 0.65 - -0.08 -0.08 - - 0.23 - -2.68 - 1.16 - - -0.34 - 2.83
AMTR_s00001p00267450 (evm_27.TU.AmTr_v1.0_scaffold00001.414)
- - - - - - - - - - 4.46 - - - - - - - - - - -
AMTR_s00001p00272420 (evm_27.TU.AmTr_v1.0_scaffold00001.526)
- - - - - - - - - - - - 2.31 2.66 2.57 - - - - - - 2.26
AMTR_s00002p00011760 (evm_27.TU.AmTr_v1.0_scaffold00002.2)
- - - - 2.39 - - - - - 1.46 2.22 1.19 -2.21 - - 0.23 - - - - 2.51
AMTR_s00002p00074380 (evm_27.TU.AmTr_v1.0_scaffold00002.36)
- - - - 2.46 - - - - 2.16 - - 1.98 - - - - - - - - 3.01
AMTR_s00003p00270280 (evm_27.TU.AmTr_v1.0_scaffold00003.430)
- - - - 4.21 - - - - - - - - - - - - - - - - 1.8
AMTR_s00004p00167380 (evm_27.TU.AmTr_v1.0_scaffold00004.184)
- - - - 3.7 - - - - - - - - 1.91 - - - - - - - 2.39
AMTR_s00005p00064930 (evm_27.TU.AmTr_v1.0_scaffold00005.11)
- - - - 3.58 - -0.75 - - - 2.35 - 0.84 -1.13 - - - - - - - 1.09
AMTR_s00005p00248790 (evm_27.TU.AmTr_v1.0_scaffold00005.151)
- - - - -0.85 - - - -2.01 - 2.77 - 0.94 -1.73 0.71 2.36 0.94 - - -0.35 - 1.42
AMTR_s00006p00065850 (evm_27.TU.AmTr_v1.0_scaffold00006.22)
- - - - 3.87 - - - - - - - - - - - - - - - - 2.88
AMTR_s00006p00091380 (evm_27.TU.AmTr_v1.0_scaffold00006.32)
- - - - 1.6 - - - - - - - - - 1.99 - - - - - - 3.91
AMTR_s00007p00219160 (evm_27.TU.AmTr_v1.0_scaffold00007.205)
- - - - 3.1 - - - - - 1.82 1.56 -0.78 -4.31 -0.99 - -0.42 - - - - 2.34
AMTR_s00007p00264290 (evm_27.TU.AmTr_v1.0_scaffold00007.347)
- - - - 3.16 - 1.67 - 0.9 - - - - 0.46 - - - - - - - 2.73
AMTR_s00008p00248660 (evm_27.TU.AmTr_v1.0_scaffold00008.183)
- - - 0.62 3.28 - - - - - - - - - - - - - - - - 3.43
AMTR_s00009p00121430 (evm_27.TU.AmTr_v1.0_scaffold00009.62)
- - - - 4.05 - - - - - - - - - - - - - - -0.9 - 2.31
AMTR_s00012p00265510 (evm_27.TU.AmTr_v1.0_scaffold00012.372)
- - - - -1.16 - - - - - 3.95 - 1.54 -0.93 0.71 - - - - - - 0.03
AMTR_s00014p00234810 (evm_27.TU.AmTr_v1.0_scaffold00014.96)
- - - - 1.2 - -1.27 - -0.26 -1.99 0.72 1.46 0.28 -0.08 1.87 0.9 -0.68 1.27 - 0.32 - 0.87
AMTR_s00015p00191610 (evm_27.TU.AmTr_v1.0_scaffold00015.40)
- - - - 2.27 - 0.11 - -2.21 0.56 3.38 - 0.81 - 0.71 - - - - - - -0.72
AMTR_s00015p00218910 (evm_27.TU.AmTr_v1.0_scaffold00015.68)
- - - 0.46 1.93 - -0.28 - -0.16 -1.1 -0.02 1.72 0.62 -0.43 0.95 - - 1.53 0.37 0.39 - -0.63
AMTR_s00016p00099330 (evm_27.TU.AmTr_v1.0_scaffold00016.60)
- - - - 3.34 - - - - - - - 0.9 1.54 - - - - - -0.4 - 2.66
AMTR_s00017p00214530 (evm_27.TU.AmTr_v1.0_scaffold00017.141)
- - - - 3.31 - - - - 0.68 - - - - 1.12 - - - - - - 3.05
AMTR_s00017p00219070 (evm_27.TU.AmTr_v1.0_scaffold00017.165)
- - - - 3.08 - - - - - 3.3 - - - 1.61 - - - - - - -0.65
AMTR_s00018p00083570 (evm_27.TU.AmTr_v1.0_scaffold00018.34)
- - - - 3.61 - - - - -3.09 -0.35 1.43 -3.38 -1.7 -0.58 - - - - - - 2.35
AMTR_s00018p00086050 (evm_27.TU.AmTr_v1.0_scaffold00018.36)
- - - - 2.74 - - - - - - - 2.69 - - - - - - - - 3.15
AMTR_s00018p00257790 (evm_27.TU.AmTr_v1.0_scaffold00018.176)
- - - - 2.59 - 0.54 - 0.3 1.69 2.34 - - 0.19 - - 1.95 - - - - -
AMTR_s00019p00185850 (evm_27.TU.AmTr_v1.0_scaffold00019.201)
- - - - 2.83 - - -0.53 - - - - - - - 1.85 - - - - - 3.41
AMTR_s00019p00229950 (evm_27.TU.AmTr_v1.0_scaffold00019.310)
- - - 1.57 2.58 - - - - - 2.14 - 1.31 - 1.71 - - - 0.38 0.66 - -
AMTR_s00019p00252590 (evm_27.TU.AmTr_v1.0_scaffold00019.423)
- - - - 2.25 - -0.76 - -1.85 -0.97 2.03 - -0.87 -0.67 -0.49 1.64 2.06 - - 0.64 - 0.07
AMTR_s00020p00223670 (evm_27.TU.AmTr_v1.0_scaffold00020.94)
- - - - 1.29 - - - - - 4.14 - -0.58 -0.51 -0.88 - - - - - - -
AMTR_s00021p00178000 (evm_27.TU.AmTr_v1.0_scaffold00021.130)
- - - - 2.74 - - - - - 1.4 - - -2.66 -2.82 - 0.16 2.96 - - 1.8 -
AMTR_s00021p00197880 (evm_27.TU.AmTr_v1.0_scaffold00021.161)
- - - - 3.03 - - - - - 2.29 - 1.1 1.53 -1.2 - - - - 0.34 - 1.14
AMTR_s00021p00249570 (evm_27.TU.AmTr_v1.0_scaffold00021.279)
- - - -0.84 3.18 - - - - -2.31 1.85 2.0 - -2.78 -0.69 - -0.13 - - 1.19 - -0.77
AMTR_s00022p00150400 (evm_27.TU.AmTr_v1.0_scaffold00022.147)
- - - - 3.31 - - - -1.46 - - - -0.49 -0.19 0.62 - - - - - - 3.1
AMTR_s00023p00074270 (evm_27.TU.AmTr_v1.0_scaffold00023.38)
- - - - 3.33 - - - -1.04 - - - - - 0.69 - 0.87 - - - - 3.01
AMTR_s00023p00189680 (evm_27.TU.AmTr_v1.0_scaffold00023.127)
- - - - 3.5 - - - - 0.4 - - - - - - - - - - - 3.23
AMTR_s00025p00245200 (evm_27.TU.AmTr_v1.0_scaffold00025.388)
- - - - 3.61 - - - - - - - - 1.18 1.82 - - - - - - 2.01
AMTR_s00026p00217570 (evm_27.TU.AmTr_v1.0_scaffold00026.118)
- - - - 3.56 - - - - - 3.36 - - - - - - - - - - -
AMTR_s00027p00234130 (evm_27.TU.AmTr_v1.0_scaffold00027.119)
- - - - 2.6 - 1.11 - - - - - 1.49 - 2.8 - - - - - - 2.01
AMTR_s00029p00215010 (evm_27.TU.AmTr_v1.0_scaffold00029.321)
- - - - - - - - - - 4.21 - - - - - - - - 1.82 - -
AMTR_s00030p00135870 (evm_27.TU.AmTr_v1.0_scaffold00030.85)
- - - - 2.24 - -1.83 - 1.4 -0.3 1.96 - 0.07 1.03 1.44 - - - 0.03 - 0.85 0.05
AMTR_s00032p00117510 (evm_27.TU.AmTr_v1.0_scaffold00032.81)
- - - - 3.3 - - - - - 2.31 - 1.6 - - - 2.07 - - - - -
AMTR_s00032p00214330 (evm_27.TU.AmTr_v1.0_scaffold00032.210)
- - - - 2.81 - - - - 0.44 3.77 - - - - - - - - - - -
AMTR_s00032p00228800 (evm_27.TU.AmTr_v1.0_scaffold00032.249)
- - - - 3.42 - 0.62 - - - - - 0.73 1.12 - - - - - - - 2.56
AMTR_s00033p00244230 (evm_27.TU.AmTr_v1.0_scaffold00033.269)
- - - - 2.46 - - - - - - - 0.3 -0.08 1.8 - - - - 2.08 - 2.72
AMTR_s00034p00047290 (evm_27.TU.AmTr_v1.0_scaffold00034.8)
- - - - - - - - - 0.14 4.02 - 0.79 - 0.14 - - - - 0.85 - -
AMTR_s00035p00192640 (evm_27.TU.AmTr_v1.0_scaffold00035.41)
- - - - 1.01 - - - 0.29 - 3.65 - 1.25 - 1.94 - - - - - - -
AMTR_s00038p00222270 (evm_27.TU.AmTr_v1.0_scaffold00038.198)
- - - - 2.43 - - - - - - - - - - - - - - 0.61 - 3.92
AMTR_s00038p00224410 (evm_27.TU.AmTr_v1.0_scaffold00038.205)
- - - - 3.3 - - - - - - - - - - - - - - - - 3.6
AMTR_s00039p00095670 (evm_27.TU.AmTr_v1.0_scaffold00039.52)
- - - - 2.01 - - - -22.28 - 3.06 - - 2.08 2.44 - - - - -14.89 - -
AMTR_s00039p00101600 (evm_27.TU.AmTr_v1.0_scaffold00039.57)
- - - - 3.08 - - - - 0.28 3.22 - - - -0.12 - - - - - - 1.04
AMTR_s00041p00179870 (evm_27.TU.AmTr_v1.0_scaffold00041.144)
- - - - - - - - - - 4.46 - - - - - - - - - - -
AMTR_s00044p00135770 (evm_27.TU.AmTr_v1.0_scaffold00044.125)
- - - - 2.15 - - - -2.59 - 0.03 1.77 -1.74 -2.67 0.69 - 0.79 1.58 - - - 2.63
AMTR_s00045p00039850 (evm_27.TU.AmTr_v1.0_scaffold00045.17)
- - - - 3.21 - - - - - - - - - - - - - - - - 3.67
AMTR_s00047p00162780 (evm_27.TU.AmTr_v1.0_scaffold00047.82)
- - - - 3.66 - - - - - - - - - - - - - - - - 3.22
AMTR_s00047p00229350 (evm_27.TU.AmTr_v1.0_scaffold00047.193)
- - - - 3.4 - - - - - - - - - -1.93 - - - - - 2.83 2.02
AMTR_s00050p00214060 (evm_27.TU.AmTr_v1.0_scaffold00050.77)
- - - - 2.87 - - - - - - - - - - - - - - - - 3.88
AMTR_s00051p00205310 (evm_27.TU.AmTr_v1.0_scaffold00051.87)
- - - - - - - - - 1.83 - - 2.88 - 3.47 - - - - - - -
AMTR_s00051p00226050 (evm_27.TU.AmTr_v1.0_scaffold00051.102)
- - - - 1.97 - - - - - - - - - 2.76 - - - - - - 3.5
AMTR_s00056p00022760 (evm_27.TU.AmTr_v1.0_scaffold00056.8)
- - - - 2.86 - - - - - - - - - - - 1.99 - - - - 3.43
AMTR_s00056p00057850 (evm_27.TU.AmTr_v1.0_scaffold00056.39)
- - - - 2.41 - - - - -2.1 1.96 - -1.85 - - - - - - - - 3.62
AMTR_s00060p00103120 (evm_27.TU.AmTr_v1.0_scaffold00060.48)
- - - - 3.27 - - - - - 2.45 - -0.56 - 2.28 - - - - - - 0.46
AMTR_s00062p00091630 (evm_27.TU.AmTr_v1.0_scaffold00062.63)
0.05 - - - 1.97 - -1.38 - -1.02 -0.86 1.44 1.21 0.16 -2.52 0.55 - - 1.04 - -1.52 - 2.45
AMTR_s00062p00210870 (evm_27.TU.AmTr_v1.0_scaffold00062.232)
- - - - 3.91 - - - - - - - 2.18 - - - - - - - - 1.28
AMTR_s00062p00215260 (evm_27.TU.AmTr_v1.0_scaffold00062.239)
- - - - 2.41 - - - -0.15 - 2.51 - 1.76 - - - 1.46 - - 1.99 - -
AMTR_s00063p00106240 (evm_27.TU.AmTr_v1.0_scaffold00063.20)
- - - - - - - - - - 4.35 - - - 0.68 - - - - - - -
AMTR_s00064p00087640 (evm_27.TU.AmTr_v1.0_scaffold00064.30)
- - - - 3.66 - - - - - - - - - - - - - - 1.5 - 2.7
AMTR_s00064p00152030 (evm_27.TU.AmTr_v1.0_scaffold00064.60)
- - - - - - - - - - 4.46 - - - - - - - - - - -
AMTR_s00065p00160910 (evm_27.TU.AmTr_v1.0_scaffold00065.119)
- - - - 2.59 - - - - - 2.66 - 2.35 - - - - - - 2.18 - -
AMTR_s00065p00199650 (evm_27.TU.AmTr_v1.0_scaffold00065.181)
- - - - -0.81 - - - - -1.59 3.18 - 1.68 - -1.59 - - - - 2.95 - -0.4
AMTR_s00067p00142790 (evm_27.TU.AmTr_v1.0_scaffold00067.133)
- - - 0.69 - - - - - - 4.09 - - - 0.41 - - - - - - 1.01
AMTR_s00067p00183140 (evm_27.TU.AmTr_v1.0_scaffold00067.195)
- - 1.23 - 2.43 - - 1.46 1.03 -0.86 - - 0.82 - 1.61 - - - - - - 2.04
AMTR_s00067p00194300 (evm_27.TU.AmTr_v1.0_scaffold00067.209)
- - - - - - - - - - 4.46 - - - - - - - - - - -
AMTR_s00069p00017960 (evm_27.TU.AmTr_v1.0_scaffold00069.4)
- - - - 2.32 - - - -2.71 - 2.34 2.36 -1.52 -0.58 1.44 - - - 0.15 0.71 - -2.56
AMTR_s00069p00179430 (evm_27.TU.AmTr_v1.0_scaffold00069.171)
- - - - - - - - - - 4.46 - - - - - - - - - - -
AMTR_s00069p00188680 (evm_27.TU.AmTr_v1.0_scaffold00069.190)
- - - - - - 1.05 - 1.18 - - - 2.46 - 3.02 - - - - - - 2.02
AMTR_s00070p00154860 (evm_27.TU.AmTr_v1.0_scaffold00070.97)
- - - - - - - - - - 3.76 - 2.16 - 1.98 - - - - - - -
AMTR_s00072p00039120 (evm_27.TU.AmTr_v1.0_scaffold00072.10)
- - - - 2.97 - - - - - 1.34 - -0.01 0.85 -1.38 - 2.53 - - 0.8 - -0.05
AMTR_s00074p00141010 (evm_27.TU.AmTr_v1.0_scaffold00074.53)
- - - - 3.59 - - - - - - - 2.51 - - - - - - - - 2.1
AMTR_s00074p00168990 (evm_27.TU.AmTr_v1.0_scaffold00074.82)
- - - - - - - - 1.33 - 4.28 - - - - - - - - - - -
AMTR_s00084p00112590 (evm_27.TU.AmTr_v1.0_scaffold00084.31)
- - - - - - - - -1.55 -6.43 3.79 - -2.94 -1.01 - - -1.53 - - 2.77 - -
AMTR_s00085p00054900 (evm_27.TU.AmTr_v1.0_scaffold00085.24)
- - - - 0.52 - -0.51 - 1.86 1.39 - - -0.23 -2.0 2.49 - 1.56 - - - - 1.98
AMTR_s00086p00098920 (evm_27.TU.AmTr_v1.0_scaffold00086.49)
- - - - 2.8 - - - - - 3.91 - - - - - - - - - - -
AMTR_s00086p00144610 (evm_27.TU.AmTr_v1.0_scaffold00086.84)
- - - - 1.43 - -0.17 - -1.88 -0.27 0.55 2.32 -0.19 -2.75 -0.07 - 1.32 0.13 - -1.28 - 2.28
AMTR_s00088p00103440 (evm_27.TU.AmTr_v1.0_scaffold00088.67)
- - - 0.75 3.14 - - - -0.81 - - - -0.69 - 0.65 - - - - 1.73 - 2.44
AMTR_s00088p00157600 (evm_27.TU.AmTr_v1.0_scaffold00088.127)
- - - - 2.92 - - - - - 3.22 - 1.76 - 0.82 - - - - - - -
- - - - 2.44 - - - - - 3.69 - - - 1.89 - - - - - - -
AMTR_s00093p00092400 (evm_27.TU.AmTr_v1.0_scaffold00093.29)
- - - - 3.54 - - - - - - - 1.18 -0.26 -0.67 - - - - - - 2.72
AMTR_s00096p00097880 (evm_27.TU.AmTr_v1.0_scaffold00096.46)
- - - - 2.25 - -2.08 - -2.04 0.51 0.88 - 0.9 -0.22 1.09 - 1.64 - - -1.6 - 2.37
AMTR_s00097p00110700 (evm_27.TU.AmTr_v1.0_scaffold00097.21)
- - - - 1.35 - - - - - 3.1 - - - -0.63 - 2.7 - - 1.9 - -
AMTR_s00101p00058510 (evm_27.TU.AmTr_v1.0_scaffold00101.30)
- - - - 2.97 - - - - - 2.02 - 1.14 - - - - - - - - 2.98
AMTR_s00102p00046460 (evm_27.TU.AmTr_v1.0_scaffold00102.17)
- - - - 3.43 - - - - - 0.9 1.66 -2.59 -2.15 -0.54 - - - - - - 2.36
AMTR_s00102p00140910 (evm_27.TU.AmTr_v1.0_scaffold00102.74)
- - - - 3.22 - - - - - 3.48 - 0.58 - - - - - - - - -
AMTR_s00106p00152110 (evm_27.TU.AmTr_v1.0_scaffold00106.126)
2.09 - - - 1.49 - -1.46 - -3.16 -1.22 - - 0.8 -3.22 1.29 0.4 -1.18 - - -3.1 -0.39 2.83
AMTR_s00106p00152160 (evm_27.TU.AmTr_v1.0_scaffold00106.127)
- - - - 1.7 - -1.66 - -3.64 -3.49 -0.41 - 1.37 -1.24 1.25 1.37 -0.79 -0.84 -0.01 -2.39 0.58 2.52
AMTR_s00121p00041090 (evm_27.TU.AmTr_v1.0_scaffold00121.7)
- - - - 2.94 - -0.33 - 1.07 -0.8 2.55 - 1.61 0.44 -0.8 - - - - - - -
AMTR_s00121p00132150 (evm_27.TU.AmTr_v1.0_scaffold00121.42)
- - - - 3.96 - - - - - - - - - - - - - - - - 2.68
AMTR_s00122p00065540 (evm_27.TU.AmTr_v1.0_scaffold00122.21)
- - - - 2.7 - - - - - - - - - - - - - - - - 3.96
- - - - - - - - 1.07 - 4.31 - - - - - - - - - - -
AMTR_s00137p00110080 (evm_27.TU.AmTr_v1.0_scaffold00137.55)
- - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00141p00102170 (evm_27.TU.AmTr_v1.0_scaffold00141.36)
- - - - 3.69 - - - - - - - - - - - - - - - - 3.18
AMTR_s00151p00090450 (evm_27.TU.AmTr_v1.0_scaffold00151.26)
- - - - - - - - -0.0 - 3.1 - 1.79 - - - 2.86 - - - - 0.82
AMTR_s00153p00016460 (evm_27.TU.AmTr_v1.0_scaffold00153.3)
- - - - 3.02 - - - - - 2.95 - - - -1.66 - 2.55 - - - - -
AMTR_s00156p00065950 (evm_27.TU.AmTr_v1.0_scaffold00156.34)
- - - - 1.61 - - - 0.32 - 4.14 - - - - - - - - - - -
AMTR_s00174p00056430 (evm_27.TU.AmTr_v1.0_scaffold00174.23)
- - - - 3.62 - - - - - - - - - - - - - - - - 3.28
AMTR_s00203p00032500 (evm_27.TU.AmTr_v1.0_scaffold00203.11)
- - - - 3.46 - - - - 1.07 - - -0.62 - - - - - - - - 3.05
AMTR_s00203p00034090 (evm_27.TU.AmTr_v1.0_scaffold00203.14)
- - - 1.75 1.39 - - - - - 3.86 - - - 0.61 - - - - - - -
AMTR_s00207p00029640 (evm_27.TU.AmTr_v1.0_scaffold00207.7)
- - - 1.6 0.25 - - - - - 2.92 - - -0.43 3.24 - - - - - - -
AMTR_s00243p00014580 (evm_27.TU.AmTr_v1.0_scaffold00243.3)
- - - - 3.64 - - - - - - - 0.25 - - - - - - - - 3.05
AMTR_s00335p00013700 (evm_27.TU.AmTr_v1.0_scaffold00335.1)
- - - - 4.1 - - - - - - - - - - - - - - - - 2.27
AMTR_s02003p00008260 (evm_27.TU.AmTr_v1.0_scaffold02003.1)
- - - - 3.18 - - - - -26.07 - - - - - - - - - - - 3.7
AMTR_s02838p00004170 (evm_27.TU.AmTr_v1.0_scaffold02838.1)
- - - - 3.21 - - - -0.11 -0.77 - - - - - - - - - - - 3.49
AMTR_s03475p00005140 (evm_27.TU.AmTr_v1.0_scaffold03475.1)
- - - - 2.58 - - - - - - - - 2.44 - - - - - - - 3.4

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.