Heatmap: Cluster_210 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Cambium and expanding xylem
Cambium
Expanding xylem
Expanding and mature xylem
Maturing xylem
Maturing xylem and dead early wood
Wood
Dead early and late wood
Dead early wood
Dead late wood
Vegetative shoots - needles
Vegetative shoots - stem
Vegetative shoots
Girdled twig - stem
Dried twig - needles
Girdled twig - needles
Needles
Needles - dawn
Needles - later afternoon
Needles - midday
Needles - night
Buds
Female flower
Male flower
Pineapple galls
Somatic germinants - abnormal type
Somatic germinants - normal type
Cell culture - H20 - 5 days
Cell culture - KI added - 5 days
Cell culture - KI added - 20 days
Cell culture - KI removed - 4 days
Cell culture - KI removed - 12 days
Cell culture - solid medium
-1.45 -1.34 -0.47 -0.66 -0.41 -0.67 0.23 -1.36 -1.72 -1.09 -0.36 0.5 -0.54 0.27 0.45 -0.26 -0.25 -0.0 -0.23 0.83 0.21 0.52 -0.13 0.28 -0.73 0.44 0.54 0.59 0.58 0.29 0.51 0.42 0.37
-5.8 -6.47 -9.0 -9.84 -7.8 - -1.22 -7.9 -7.74 -6.75 -0.07 -0.22 -1.02 -0.57 1.55 -0.43 0.74 -0.02 0.44 0.78 0.65 -0.51 -0.96 -0.66 -0.98 0.6 0.8 1.09 1.12 1.1 1.11 1.11 1.12
-6.49 -3.7 -5.51 - -6.66 -4.04 -0.54 -4.68 - -3.57 0.27 -0.1 -0.15 -0.71 -0.05 0.11 0.29 0.36 0.49 0.9 0.38 -0.1 0.67 -0.05 -0.25 0.26 0.33 0.79 0.76 1.24 1.18 1.34 0.91
-1.04 -0.99 -1.25 -0.71 -0.89 0.29 -0.58 -0.25 -0.54 0.57 -0.39 -0.33 -1.36 0.4 0.8 -0.16 -0.03 -0.11 -0.29 0.04 -0.1 -0.15 -0.85 -1.71 -0.92 0.3 0.55 0.5 1.01 1.09 0.7 0.34 0.61
-5.46 -6.55 -6.32 - -6.92 -2.59 -0.4 - - - -0.47 0.73 -1.3 -0.29 -0.75 -2.03 1.08 -3.09 -1.78 -1.04 -0.73 -0.1 1.1 -1.42 -1.26 0.8 0.97 0.87 1.61 1.84 1.07 0.93 1.98
-0.29 -0.64 -0.77 -0.72 -0.51 -0.16 0.37 -0.17 -0.39 0.04 0.09 0.43 0.24 -0.15 -0.53 -0.26 -0.51 -0.51 -0.3 -0.02 -0.02 0.46 0.94 0.04 0.01 -0.09 0.13 0.08 0.35 0.46 0.33 -0.1 0.41
-0.26 -0.87 -1.23 -1.42 -0.98 -0.03 0.17 -0.48 -0.58 -0.18 0.23 -0.05 0.53 -0.13 0.26 -0.06 -0.36 -0.43 -0.07 0.17 -0.03 0.38 0.47 0.56 0.55 -0.12 -0.05 0.22 0.65 0.12 0.21 0.02 0.25
-1.17 -1.35 -0.53 -0.79 -0.38 -0.34 0.1 -0.91 -1.16 -0.96 0.29 -0.01 -0.96 -0.74 0.91 0.16 -0.22 0.17 0.07 0.07 -0.01 -0.38 -1.39 0.41 -0.74 0.29 0.36 0.89 0.74 0.5 0.77 1.01 0.13
-1.16 -1.1 -0.5 -0.36 -0.47 -0.92 0.18 -0.34 -1.02 -0.67 -0.05 0.12 -0.61 -0.37 0.67 -0.0 0.22 -0.31 -0.05 0.25 -0.02 0.31 -0.34 -1.52 0.15 0.28 0.34 0.53 0.54 0.66 0.73 0.58 0.6
-0.66 -0.4 -0.63 -0.39 -0.46 0.26 0.65 -0.75 -0.42 0.07 0.04 0.26 -0.17 -0.14 -0.89 -0.61 -0.48 -0.77 0.26 -0.24 -0.23 -0.45 0.3 0.17 -0.19 0.41 0.33 0.37 0.71 0.81 0.21 -0.06 0.64
-1.73 -1.8 -1.56 -1.33 -0.96 -0.59 -0.03 -1.18 -1.61 -0.45 -0.31 -0.17 -0.3 0.04 0.46 0.23 0.23 -0.41 -0.45 0.13 -0.28 0.36 0.34 -0.46 -0.17 0.46 0.65 0.6 0.73 0.89 0.75 0.54 1.06
-1.76 -1.22 -1.86 -2.13 -1.84 -3.82 0.03 -0.88 -1.55 -1.72 -1.64 -0.18 -0.24 -0.06 0.66 -0.13 0.33 -1.09 -1.49 -2.03 -1.23 0.16 1.12 1.48 -0.18 0.3 0.59 0.91 0.96 0.74 1.13 0.8 0.87
-6.11 -4.25 -3.56 -3.68 -5.94 - -1.97 -7.89 -6.38 -6.41 0.59 -0.34 -0.92 -2.8 1.39 0.83 0.45 1.1 0.37 1.23 0.62 -1.29 -0.1 -1.64 -0.55 -0.74 -0.26 0.51 0.59 1.64 0.85 1.31 1.21
-0.8 -1.17 -0.83 -0.6 -0.39 0.55 -0.27 -0.38 -0.41 -0.37 -0.32 0.08 -0.35 -0.41 0.36 -0.53 0.14 -0.14 -0.26 -0.17 -0.14 -0.28 -0.51 -0.55 -1.13 0.73 0.81 0.33 0.76 0.78 0.7 0.61 0.59
- - - - - - -1.54 -4.75 - - -0.32 -2.76 -1.51 0.21 1.67 0.52 0.57 0.58 0.43 1.22 0.41 -1.76 -0.55 -2.36 -0.3 0.24 0.47 0.99 1.27 1.07 1.68 0.69 0.77
-0.98 -1.68 -1.18 -1.52 -0.72 -0.41 -0.28 -0.66 -1.1 -0.03 0.85 0.43 -1.4 0.5 0.23 0.52 -0.3 0.91 0.52 1.0 0.51 -0.17 -0.75 -1.51 0.06 0.01 0.07 0.3 0.26 0.11 0.38 0.29 0.09
-1.66 -2.11 -3.59 -3.64 -4.57 -3.8 0.63 -2.29 -3.5 -3.51 -0.79 -0.32 -0.95 -0.17 1.88 0.93 0.29 0.3 -0.37 0.54 0.35 -0.06 -1.89 -0.41 -0.34 -0.09 -0.04 1.27 0.7 0.51 1.04 1.02 0.74
-1.25 -1.17 -0.77 -0.94 -0.73 -0.6 0.18 -1.13 -1.4 -0.88 -0.28 0.12 -0.06 0.44 0.32 0.32 0.03 0.22 -0.17 0.1 -0.05 0.41 -0.01 0.03 -0.43 0.05 0.13 0.5 0.74 0.77 0.62 0.46 0.59
-0.65 -0.57 -0.88 -0.69 -0.46 0.17 0.39 0.03 -0.14 0.54 -0.12 0.32 -0.35 0.18 -0.06 -0.31 0.36 -0.07 -0.15 0.13 -0.23 0.3 0.22 0.01 -0.72 0.41 0.56 -0.2 0.38 0.24 -0.1 -0.41 0.23
-1.4 -1.59 -1.43 -1.59 -1.16 -0.82 -0.08 -1.1 -1.45 -1.11 0.13 -0.18 0.16 0.46 -0.33 0.31 0.22 0.11 -0.35 0.34 -0.17 0.07 -0.14 -0.01 -0.03 0.1 0.23 0.57 0.77 0.94 0.79 0.73 0.99
-3.41 -3.09 -3.65 -2.96 -3.24 -2.39 -1.42 -3.4 -3.55 -2.67 -0.28 1.29 -0.77 -0.7 1.61 0.51 0.12 -0.39 0.07 0.13 0.21 -0.2 -0.25 -1.8 -0.17 0.23 0.33 1.0 0.96 1.05 1.26 1.07 0.73
-1.79 -1.27 -2.46 -2.46 -3.02 -2.62 -1.16 -4.82 -4.11 -0.69 -1.09 -0.15 -0.36 0.17 1.35 -0.69 0.51 -1.63 -1.88 -0.9 -0.98 0.3 0.84 0.04 -0.99 0.71 0.7 1.0 1.17 1.29 1.09 1.13 1.1
-2.75 -1.78 -4.7 - -6.7 -5.88 -0.14 -4.2 -3.91 - -0.51 -0.2 -0.16 -2.4 2.47 0.7 0.14 0.03 -1.11 -1.64 -0.93 -1.35 -1.09 -0.8 -0.33 0.7 0.66 1.22 0.21 0.6 1.82 1.37 0.73
-0.27 -0.22 -0.94 -1.45 -0.91 -0.22 0.42 -0.79 -0.85 -0.79 -0.26 0.76 -0.8 0.94 1.04 -0.58 -0.04 -0.1 -0.09 -0.43 -0.09 0.53 0.49 -0.9 -0.12 0.25 0.25 0.17 0.24 0.31 0.57 -0.07 0.07
-1.09 -1.38 -1.17 -1.3 -0.68 -0.1 0.69 -0.78 -0.72 -0.02 -0.13 0.27 -0.88 0.35 0.39 -0.33 -0.19 0.22 0.03 0.04 -0.04 0.06 -0.14 -0.41 -0.24 -0.22 0.15 0.69 0.87 0.59 0.49 0.27 0.83
-1.93 -2.03 -1.93 -1.82 -1.65 -1.26 -0.43 -1.83 -2.06 -1.65 -0.16 -0.21 -0.94 -0.39 0.28 -0.64 0.66 0.11 -0.41 -0.17 -0.23 -0.46 -0.93 -1.15 -0.77 0.77 1.17 0.81 1.25 1.45 1.13 0.99 1.19
-2.07 -2.72 -2.07 -1.51 -1.64 -1.55 0.24 -2.36 -3.22 -1.95 0.23 0.56 -1.31 0.88 -0.27 1.12 -0.24 0.99 0.55 0.86 0.68 -0.32 -1.51 -0.68 -0.73 0.23 0.39 0.74 0.5 0.58 0.39 0.45 0.92
-6.54 -6.01 -4.67 -4.52 -4.15 -2.89 -2.39 -2.2 -1.38 -1.48 -0.01 0.22 0.4 -0.11 -1.84 -0.36 0.47 -0.65 -0.65 -0.62 -0.85 0.95 1.03 -0.23 0.84 0.33 0.5 0.78 1.24 1.4 1.1 1.46 0.4
- -4.96 -4.52 -6.62 -5.38 - -2.21 - -6.86 -4.88 -1.45 -0.81 0.99 0.24 -3.86 -3.08 0.84 -3.06 -1.2 -3.09 -2.61 0.76 1.23 -0.17 0.85 0.5 0.67 0.88 1.73 1.49 1.22 1.58 1.42
-3.95 -5.11 -4.58 -4.76 -4.83 -2.87 -0.27 -3.77 -5.4 -6.19 -0.03 -0.03 -0.75 -0.85 0.52 -0.06 0.68 -0.61 -0.37 0.07 0.45 -0.63 -0.67 -0.93 -1.12 0.95 1.45 0.87 1.3 1.47 1.18 1.09 1.25
-2.54 -3.48 -2.25 -1.86 -2.3 -2.35 -0.52 -3.74 -3.87 -3.62 0.17 0.94 -1.05 -0.67 0.29 0.91 0.17 -0.97 0.47 0.41 -0.66 0.04 -1.74 -1.65 -0.3 0.25 0.44 1.3 1.11 0.97 1.18 1.24 1.32
-4.22 -4.64 -3.32 -2.71 -2.13 -3.4 -1.2 -6.28 -4.99 -5.04 -0.21 -0.75 -0.58 -0.81 2.55 0.27 0.06 0.08 0.19 0.71 0.32 -0.26 -1.02 0.9 -1.45 -0.02 0.04 1.01 0.56 0.52 1.11 0.97 0.39
-1.57 -2.29 -2.32 -2.34 -1.66 -3.26 -0.14 -2.93 -2.67 -2.72 -1.21 -0.13 -0.01 -1.06 -2.22 -1.49 0.4 -0.8 -1.0 -0.96 -1.49 1.2 0.59 0.45 1.13 0.57 0.56 0.99 1.36 1.38 0.92 1.02 1.16
- -5.52 -5.8 -5.88 - - -1.85 -5.12 - - -0.13 -0.95 -1.43 -0.1 -1.1 -0.19 0.77 -0.73 -0.49 -1.78 -1.75 -0.14 -1.39 -1.71 -3.23 0.98 1.26 1.59 1.59 1.7 1.39 1.75 1.86
-2.48 -2.93 -1.73 -1.58 -1.41 -1.67 0.85 -3.67 -3.43 -1.89 -0.3 0.81 -0.76 -0.1 1.31 0.74 0.66 0.2 0.37 0.37 0.23 0.52 -0.02 -0.12 -0.05 0.17 0.27 0.38 0.32 0.25 0.4 0.36 0.49
-1.66 -1.41 -1.28 -1.23 -1.35 -1.56 -0.9 -2.25 -2.77 -2.07 -0.04 -0.36 -0.58 -0.48 1.41 -0.13 0.14 0.09 0.15 0.46 0.24 -0.42 -1.0 -0.29 -0.44 0.27 0.21 1.3 0.69 0.83 1.03 1.05 0.95
-0.55 -0.64 -0.92 -0.86 -0.59 0.09 -0.16 -0.54 -0.51 -0.4 -0.32 0.21 0.59 0.63 -0.45 0.27 -0.32 -0.29 -0.43 -0.37 -0.34 0.77 0.25 0.63 0.65 -0.12 0.01 0.14 0.26 0.37 0.28 0.09 0.16
-4.47 -4.43 -4.6 -5.16 -5.31 -6.97 -1.6 -5.63 -5.29 -4.14 -0.7 -0.18 -1.79 -1.39 1.28 -1.08 0.61 -0.1 -0.18 0.35 0.0 -1.0 -0.96 -0.89 -1.33 0.72 0.84 1.4 1.34 1.55 1.41 1.44 1.5
-0.56 -0.32 -0.36 -0.09 -0.31 -0.39 0.03 -0.37 -0.55 -0.15 -0.52 0.73 -0.61 0.38 -0.3 -0.42 0.02 -0.34 -0.32 -0.06 -0.28 0.63 -0.82 -0.78 -0.52 0.33 0.32 0.31 0.45 0.69 0.35 0.43 0.9
-0.52 -0.61 -0.48 -0.28 -0.06 0.36 -0.06 -0.41 -0.31 -0.01 -0.18 -0.12 -1.2 -0.95 0.36 -0.42 0.21 -0.23 -0.67 0.01 -0.15 -0.46 -1.59 -1.25 -0.6 0.67 0.83 0.66 0.54 0.75 0.72 0.6 0.71
-0.98 -0.76 -1.14 -1.24 -1.52 -0.57 0.06 -1.32 -0.01 -0.48 0.07 0.01 -0.54 -0.43 0.17 -0.37 0.38 0.14 -0.19 -0.17 -0.16 -0.1 -1.51 -1.18 -0.67 0.3 0.37 0.71 0.64 1.13 0.99 0.91 1.18
- -5.05 - - -6.46 -5.15 -1.56 -7.46 -6.43 - 0.53 -1.09 0.69 -1.96 0.71 0.72 0.95 0.4 1.02 0.96 0.56 -0.75 -0.22 -2.1 0.54 0.14 -0.01 1.1 0.66 0.63 1.05 1.09 1.07
-7.35 -5.19 -6.37 - -7.09 -6.15 -2.32 -6.96 -8.83 -7.78 0.11 -0.5 -1.22 -1.03 1.69 -0.26 0.34 0.02 0.09 0.22 -0.02 0.19 -0.98 -0.74 -0.39 0.77 0.64 1.14 1.07 1.52 1.34 1.44 0.82
-0.28 -0.03 -0.87 -0.45 -0.8 -0.02 0.04 -0.33 -0.38 0.17 -0.32 0.3 -0.69 0.97 0.67 -0.69 0.03 0.45 -0.58 0.16 -0.38 0.36 -0.25 -1.06 -0.61 0.41 0.64 0.04 0.18 0.34 0.29 0.1 -0.02
-4.41 -1.96 -6.97 -5.16 -3.91 - -0.43 -3.33 - - 0.18 0.25 -0.98 -0.58 -0.08 -0.67 0.2 0.09 -0.01 -0.04 -0.14 0.01 0.05 -0.14 -0.04 0.33 0.44 1.17 1.2 1.42 1.27 1.32 1.54
-1.47 -1.79 -2.77 -2.17 -1.97 -1.43 -0.85 -1.78 -1.6 -1.12 0.76 1.1 -1.49 1.05 1.19 0.97 -0.7 0.22 0.84 0.48 0.71 0.19 -0.49 -0.91 -0.01 -0.39 -0.27 -0.13 0.55 0.93 0.33 0.22 -0.08
-2.31 -2.24 -2.17 -2.47 -1.78 -1.12 -1.28 -1.71 -1.79 -1.07 -0.02 -0.23 -0.87 -0.76 1.65 -0.36 0.44 0.3 0.15 0.37 0.31 -0.78 -1.18 0.03 -1.06 0.59 0.74 0.86 0.93 0.93 0.88 0.87 0.89
-1.2 -1.38 -0.64 -0.35 -0.46 0.11 0.5 -1.47 -2.0 -0.38 -0.22 0.22 -0.92 0.53 0.7 -0.42 -0.33 0.21 -0.3 -0.44 -0.05 0.48 -0.24 -1.77 -0.95 0.34 0.36 0.52 0.71 0.77 0.62 0.78 0.77
-0.9 -0.84 -0.73 -0.89 -0.42 0.03 0.11 -0.42 -0.72 0.07 0.0 0.35 -0.58 0.51 0.47 0.04 -0.2 -0.52 -0.19 -0.07 0.08 0.24 -0.3 -1.1 0.02 -0.05 0.0 0.37 0.82 0.75 0.43 0.11 0.73
-0.1 -0.26 -0.07 -0.52 -0.83 0.38 0.38 -0.81 -1.03 -0.35 -1.02 -0.08 -0.74 0.67 -1.39 -0.73 -0.27 -1.69 -0.39 -0.95 -1.27 0.66 -0.14 0.42 -1.17 0.3 0.48 0.94 1.26 0.99 -0.01 -0.81 1.23
-1.98 -2.77 -0.8 -0.75 -0.02 -1.1 -1.11 -2.91 -2.85 -2.27 -0.32 -0.81 -1.07 -0.62 2.31 0.05 -0.07 0.37 0.13 0.77 0.2 -0.21 -0.95 0.5 -1.01 0.05 0.05 0.8 0.36 0.29 0.84 0.75 0.36
-4.92 -3.24 -2.86 -3.1 -2.01 -2.6 0.09 -4.87 -4.58 -2.93 -0.48 -0.34 -0.85 -1.06 0.1 -0.72 0.55 -0.87 -0.27 -0.31 -0.19 0.06 -0.57 -0.35 -0.23 0.55 0.89 1.61 1.51 1.16 1.12 1.27 1.47
-2.49 -3.07 -3.83 -1.68 -2.9 -1.77 -0.28 -1.47 -2.93 - 0.3 -0.6 -1.84 -1.39 0.21 -0.4 0.82 -0.68 -0.0 -0.34 -1.46 -1.56 -1.99 -2.55 -0.41 0.35 0.51 1.04 1.67 1.84 1.18 1.26 1.96
-2.28 -2.62 -2.53 -2.71 -2.58 -2.18 -0.4 -2.6 -2.56 -2.59 -0.05 0.09 -0.67 -0.09 0.67 -0.07 0.46 0.05 0.24 0.06 0.16 -0.12 -0.47 -0.6 -0.43 0.53 0.4 0.89 1.08 1.12 1.03 1.16 1.35
-2.71 -2.94 -1.74 -1.23 -0.74 -1.07 0.57 -1.42 -1.38 -1.04 0.16 0.42 -2.03 -0.27 1.59 0.0 -0.04 0.17 -0.11 0.49 0.06 -0.06 -0.07 -0.76 -0.58 0.38 0.32 0.54 0.54 0.6 0.64 0.7 0.88
-1.95 -1.36 -1.82 -0.87 -0.95 -0.37 -1.07 -0.64 -0.82 -0.16 0.11 0.57 -0.4 0.04 1.26 0.15 -0.17 0.09 -0.05 0.09 0.05 0.91 0.04 -1.33 0.09 -0.62 -0.59 0.63 0.45 0.55 0.96 0.76 0.1
-3.72 -7.75 -2.05 -1.93 -2.61 -3.03 -1.55 -2.42 -3.09 -1.98 0.1 -0.58 -3.13 -0.77 0.42 -0.43 0.03 0.3 0.12 0.07 -0.16 -3.48 -2.79 -2.43 -2.14 0.74 0.73 1.27 1.08 2.08 1.56 1.3 1.71
-4.44 -4.16 -4.95 -5.51 -5.92 -5.36 -2.14 -4.16 -4.71 -4.18 -0.22 -0.89 -1.53 -0.7 1.56 0.01 0.51 -0.11 -0.34 -0.09 -0.12 -0.01 -1.21 -1.12 -0.78 1.1 0.93 1.1 1.01 1.54 1.61 1.52 0.7
- - -6.69 - -8.96 - -2.63 - - -3.69 -0.24 -1.68 -0.5 -0.81 2.14 0.57 0.44 0.49 0.45 0.69 1.13 -2.12 -0.48 -1.11 -0.14 0.13 0.35 1.19 1.21 0.64 1.23 0.62 0.81
-1.05 -1.36 -1.26 -1.23 -0.8 -0.45 0.56 -0.51 -0.76 -0.22 -0.0 0.29 -0.04 0.58 0.42 0.25 -0.38 0.33 0.05 0.45 0.15 0.44 -0.16 -0.15 -0.35 -0.31 -0.1 0.55 0.17 0.43 0.62 0.41 0.17
-0.14 -0.18 -0.34 -0.33 -0.54 0.23 -0.09 0.06 -0.39 0.38 -0.48 0.21 -0.72 0.02 -0.21 -0.74 0.38 0.44 -0.87 -0.57 -1.23 -0.03 -0.67 -1.53 0.08 0.37 0.54 0.2 0.33 0.8 0.44 0.41 0.91
-0.62 -1.03 -0.62 -0.85 -0.27 0.16 0.25 -0.4 -0.52 -0.24 -0.21 0.13 -0.34 0.12 -0.19 0.17 0.17 -0.19 -0.27 -0.32 -0.23 0.09 -0.06 -0.41 -0.21 0.16 0.47 0.33 0.7 0.8 0.37 0.27 0.71
-0.18 -0.19 -0.23 -0.12 -0.25 0.58 -0.04 -0.74 -0.91 -0.34 -0.16 -0.18 -1.65 -0.15 -0.36 0.23 -0.23 0.47 -0.17 0.31 -0.2 -0.06 -1.03 -1.85 -0.66 0.1 0.32 0.27 0.95 0.89 0.67 0.13 0.76
-7.76 -7.12 -9.04 -9.41 -9.52 -9.37 -2.11 - - -8.22 0.15 -0.86 -1.4 -0.78 1.85 0.31 0.34 -0.18 0.05 0.3 -0.17 0.26 -0.94 -0.59 -0.78 0.26 -0.03 1.17 1.01 1.53 1.59 1.6 0.72

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.