Heatmap: Cluster_70 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots (apex), 7 DAG
Roots (differentation zone), 4 DAP
Roots (elongation zone), 4 DAP
Roots (meristematic zone), 4 DAP
Roots (stele cells), 7 DAS
Roots (tip)
Leaves (rosette), 21 DAG
Leaves (rosette), 29 DAG
Leaves (rosette), 35 DAG
Leaves (rosette), 42 DAG
Leaves (rosette), 57 DAG
Epidermis cells
Mature guard cells
Stems (internode)
Stems (internode), senescent
Meristem (M1-3), 7-9 DAG
Meristem (M4-6), 1-12 DAG
Meristem (M7-1), 13-16 DAG
Axis of the inflorescence
Pedicel
Flowers (receptacles)
Flowers (floral buds)
Flowers (sepals)
Flowers (petals)
Flowers (stamen filaments)
Flowers (anthers)
Flowers (carpels)
Flowers (ovules)
Stigmatic tissues
Pollen
Siliques
Siliques, senescent
Pods of Siliques
Pods of Siliques, senescent
Embryo
Endosperm
Seeds, dry
Seeds, from senescent siliques
Seeds, young
Seeds, germinating
Seedlings, 5 DAG
Seedlings, 11 DAG
Seedlings, 14 DAG
Seedlings, etiolated
-0.18 0.82 -0.14 -0.53 1.7 -1.14 -0.69 0.91 1.89 2.09 2.01 -4.18 -1.68 -0.83 0.52 -1.03 -0.85 -0.36 -0.38 -0.41 0.0 -1.08 -0.22 -0.65 -1.01 -1.29 -0.05 -0.37 -1.44 -2.26 -0.8 -1.4 -0.37 0.26 -0.77 -1.29 -2.39 -1.98 -0.46 -0.3 -0.7 -0.84 0.55 0.18
AT1G04110 (SDD1)
- - - - - - 0.42 - -7.4 - -7.4 -0.56 -4.65 -2.27 -4.77 -1.82 -1.01 -0.27 1.37 2.79 1.82 0.87 2.09 - - -0.07 0.75 0.26 -0.37 - -2.42 - -3.78 - 0.3 -2.02 - -6.4 -1.03 1.52 1.11 2.55 0.93 0.36
0.06 1.54 -0.38 -0.69 - -1.97 -1.29 1.63 1.5 1.2 0.93 -3.64 - -0.72 0.08 -2.4 -2.11 -1.19 -0.06 -1.15 -0.98 0.0 -1.14 -1.19 -4.21 -0.72 0.71 -1.03 -0.63 -2.59 -1.41 0.43 -1.19 0.26 1.02 -1.41 2.99 -0.3 -1.4 -0.63 -2.24 -0.15 -0.13 -1.81
AT1G10370 (ERD9)
-5.99 -1.03 -2.34 -10.77 -5.15 -3.56 0.7 -5.41 -6.06 -4.77 -7.01 4.12 4.21 -2.52 -6.36 -4.71 -4.58 -3.81 -1.56 -1.8 -2.63 -0.71 -2.7 -0.95 -5.52 -2.67 -2.41 -5.15 -2.15 - -2.75 -3.73 -4.31 -1.15 -1.95 -5.13 -4.21 -4.72 -5.15 -1.67 -3.32 -1.09 -1.88 -1.64
0.63 0.49 0.59 0.03 1.03 -0.07 -0.29 -0.91 -0.63 -0.8 -0.45 -2.3 -2.14 0.42 0.31 -0.41 -0.1 0.21 0.15 -0.08 0.27 0.28 -0.3 0.25 -0.01 -0.76 0.37 0.59 0.33 -4.13 -0.12 -0.8 -0.17 -0.39 0.11 1.36 -0.99 -1.53 0.34 0.14 -0.71 0.17 0.22 0.33
AT1G15990 (CNGC7)
- - - - - - 1.17 - - - - 2.52 - -2.65 - - -6.83 - -2.65 -0.03 -1.2 2.8 0.63 - -3.74 3.32 -3.3 - -2.41 2.84 -0.54 - 0.58 -3.4 - -2.09 - - -4.06 -2.88 0.3 1.49 0.4 -2.18
AT1G32480 (IDH-IV)
- - - - - -0.99 - - - - - 4.71 - - 1.81 - - - - - - - - - - 0.69 -2.97 - - - - - - - - 1.22 1.01 2.82 - - - - - -0.56
AT1G36370 (SHM7)
-0.45 0.11 -0.96 -1.48 -1.23 -1.37 -1.06 -1.68 -0.9 -0.43 0.21 -0.05 2.87 -0.2 1.91 -1.31 -1.27 -1.13 -1.24 -1.66 -0.03 -0.2 -0.73 -0.42 -1.02 -0.98 -0.2 0.74 -0.61 -2.78 0.05 -1.21 -0.27 1.16 -0.37 1.44 -2.37 -0.79 0.34 -1.22 -1.49 -0.35 1.33 -0.5
AT1G68910 (WIT2)
0.14 0.47 0.1 -1.53 - -0.72 -0.33 0.25 0.94 1.17 1.17 -1.18 -1.46 -0.09 0.66 -0.56 -0.38 0.24 -0.4 -0.75 0.42 0.73 -0.14 -0.34 -0.97 -1.77 0.25 0.17 -0.54 -6.19 0.31 -2.13 0.1 1.31 -0.34 0.78 -4.17 -3.11 0.42 -0.11 -0.95 0.94 0.83 0.1
0.08 0.43 0.55 0.28 2.05 0.03 -1.8 0.03 0.32 0.18 0.17 -2.54 -1.97 -0.83 0.59 -0.44 -0.0 0.53 -0.45 -0.94 -0.16 -0.99 -0.5 -0.53 -1.35 -1.62 0.89 0.71 -0.34 - -0.11 -0.82 -0.35 1.19 -0.18 1.15 -0.45 -1.24 0.46 0.43 -1.48 -1.35 0.17 -0.32
0.45 2.32 1.49 0.93 1.15 0.34 -1.53 -2.35 -0.39 0.45 -0.35 0.33 2.97 -1.52 -1.38 -1.67 -0.98 -0.3 -0.04 -0.4 -0.19 -1.09 -2.03 -2.61 -2.98 -2.96 0.6 0.14 -1.1 - -2.37 -1.63 -2.87 -1.41 0.06 -1.93 0.54 -1.96 -0.44 -0.05 -1.06 -1.92 -0.53 -0.88
AT1G74720 (QKY)
-0.13 -1.12 -0.97 0.51 -2.94 -0.09 0.35 -1.35 -0.48 -0.8 -0.94 -3.5 -4.39 0.11 -0.93 0.99 1.15 1.41 0.88 0.34 0.27 -0.86 -0.11 -0.28 -0.28 -1.45 0.97 1.37 -0.58 -8.01 -0.12 -0.84 -0.31 -0.17 1.33 0.1 -1.11 -1.43 0.56 0.8 0.46 -0.66 -0.2 -0.21
0.3 -1.5 0.34 0.26 0.99 0.19 -1.3 -1.86 -1.11 -1.06 -1.15 -3.78 -4.06 -0.41 -0.59 0.18 0.3 0.2 0.01 -0.44 0.72 -0.06 -0.44 0.26 0.39 -0.46 0.7 1.55 2.44 -5.88 0.2 -2.48 -0.44 -0.56 -0.85 1.26 -2.52 -2.86 1.7 -0.76 -1.88 -1.81 -1.21 -0.91
-1.35 -1.9 -0.96 0.51 0.04 0.2 -3.53 -5.29 -4.77 -4.5 -3.82 0.73 2.17 -1.98 -0.41 -3.11 -3.53 -2.75 -2.87 -2.26 -1.56 1.1 -2.49 -1.84 -1.41 2.51 -1.39 -1.59 -2.82 3.88 -1.62 -2.38 -2.21 -1.79 -0.26 1.53 -3.53 -4.79 -1.32 -2.2 -1.99 -1.15 -2.1 -2.88
AT1G80080 (TMM)
-3.25 -5.45 - -1.1 - -2.81 0.04 -2.77 -2.79 -2.72 -3.49 0.44 0.27 -3.62 -7.48 0.07 -1.0 0.28 2.13 1.65 -0.17 0.71 0.49 -4.84 -3.54 -1.24 2.1 -0.38 -1.9 -7.25 -2.61 -3.77 -2.71 -2.8 0.2 -2.72 -6.21 -5.33 -1.81 1.95 1.97 1.09 2.2 1.2
- - - - 4.21 - - - - - - - - 2.55 2.98 - - - 0.28 - - - - - - -1.59 -3.35 - - - - 0.13 - 0.07 - 2.78 -0.25 - - -1.94 - - - -
AT2G32700 (LUH)
0.42 0.26 0.42 -0.27 0.8 -0.17 -0.58 0.44 0.79 0.77 0.76 -0.94 0.24 -0.0 0.16 -1.15 -0.84 -0.32 -0.12 -0.16 0.46 0.44 -0.06 0.44 0.17 -0.9 0.34 0.2 0.29 -6.33 -0.24 -1.29 -0.17 0.4 -0.45 0.48 -1.78 -1.72 0.13 -0.4 -0.41 -0.43 0.21 0.03
-3.29 -0.87 -1.5 -0.84 - -1.33 0.2 -0.64 -0.48 -0.94 -0.13 -0.39 2.13 -0.17 -0.45 -0.96 -0.7 -0.25 0.89 0.39 0.95 1.03 0.4 -0.59 -0.98 0.7 0.89 0.22 -0.16 -0.83 -0.31 -1.08 -0.06 -1.67 1.28 -1.6 0.59 -0.97 -0.47 -0.23 -0.02 0.27 0.34 0.34
-0.06 -1.82 -0.08 0.69 -0.38 -0.03 -1.19 -2.13 -2.98 -3.43 -3.74 -1.17 -3.23 -1.88 0.25 1.14 1.37 1.55 0.95 0.72 0.4 0.14 -0.02 -0.08 0.13 -1.29 1.2 1.13 -0.52 - -1.31 0.35 -1.6 -2.61 1.17 -1.06 0.8 0.43 0.44 -0.08 -1.22 -0.99 0.12 -0.26
AT2G44190 (EDE1)
0.16 -3.24 -1.72 1.58 - 0.51 -3.37 -5.25 -4.74 -4.61 -4.55 0.15 -5.89 -0.66 -5.31 0.94 1.19 1.61 2.01 0.91 0.1 0.78 -1.51 -4.11 -3.96 -0.22 1.36 1.7 -1.98 0.7 -0.87 -4.27 -1.83 -6.43 1.89 -0.36 -3.0 -3.37 1.07 -1.25 -1.13 0.66 -0.87 -1.37
0.08 -0.72 -0.14 0.73 0.49 0.13 -0.66 0.02 0.3 0.29 0.11 -1.11 -2.05 -0.36 0.32 -0.0 0.39 0.82 0.53 0.22 0.67 -0.01 -0.08 -0.07 -0.67 -1.33 0.88 0.77 -0.04 - -0.2 -1.43 -0.2 -0.14 0.85 0.4 -2.0 -1.69 0.63 0.1 -0.55 -0.29 -0.15 -0.11
AT2G47900 (TLP3)
-0.08 0.13 0.41 0.98 1.23 0.38 -0.79 -0.51 -0.44 -0.28 -0.42 -0.61 -1.4 -0.41 -0.38 0.13 0.34 0.7 0.31 0.03 0.2 -0.38 -0.14 -0.1 -0.01 -1.08 0.98 0.65 0.3 -5.58 -0.53 -1.89 -0.48 -0.6 0.89 1.18 -1.36 -1.96 -0.2 -0.18 -0.3 -0.92 0.27 0.26
0.53 0.43 1.29 -0.39 0.69 0.22 -2.43 0.95 0.95 0.85 0.84 -0.79 -2.0 -0.04 0.7 -1.25 -0.93 -0.38 -0.45 -0.53 -0.07 -0.94 -0.18 0.68 0.25 -1.31 0.0 -0.3 0.14 - -0.1 -1.1 -0.07 -0.23 -1.55 1.83 -2.02 -1.24 -0.29 -0.2 -1.01 -1.98 -0.25 0.57
AT3G04240 (SEC)
-0.53 0.18 -0.39 -0.42 -1.42 -1.15 -0.26 0.15 1.24 1.43 1.28 1.74 0.6 -0.44 0.81 -0.76 -0.4 -0.06 -0.32 -0.55 0.15 -0.33 -0.36 -0.04 -0.73 -0.64 0.21 0.21 -0.99 -1.93 -0.52 -0.83 -0.33 0.9 -0.46 -0.24 -1.11 -1.23 -0.23 -0.89 -0.53 -0.75 0.4 -0.14
AT3G06120 (MUTE)
- - - - - - 0.33 -3.51 -4.43 -4.93 -4.92 -2.0 -3.98 -3.23 -3.32 -3.88 -3.54 -2.7 2.26 2.85 1.67 1.42 1.75 - - -0.99 1.28 -2.06 -0.09 - -4.3 -2.19 -5.29 -2.86 - -6.27 -5.7 -3.2 -1.83 1.78 0.35 2.33 2.16 0.42
0.49 -0.25 0.69 0.68 - -0.1 -1.71 -0.51 -0.64 -0.57 -0.57 -1.34 -2.84 1.08 -0.27 1.09 1.5 1.75 1.15 0.69 0.02 -0.44 -0.5 -0.77 -0.01 -1.52 1.27 1.41 -0.14 -5.78 -0.77 -3.08 -1.04 -0.91 0.12 -0.23 -3.41 -4.08 0.69 -0.55 -1.34 -1.23 -0.19 -0.29
0.62 0.19 0.5 -0.54 1.19 -0.07 -0.29 -0.56 0.48 0.6 0.54 -0.99 0.72 -0.22 -0.0 -0.67 -0.48 -0.36 -0.42 -0.51 0.04 0.02 -0.51 0.02 0.17 -0.4 -0.16 0.1 -0.13 -1.1 -0.38 -0.19 -0.29 0.3 0.08 0.99 -0.3 -0.48 -0.0 -0.31 -0.85 -0.37 -0.02 0.24
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.13 - 3.16 - - - - - - - -
0.09 0.25 1.39 0.95 -0.26 1.12 -1.02 0.32 0.27 0.31 0.39 -1.35 0.44 0.34 0.34 -0.91 -0.66 -0.18 -0.45 -0.62 0.05 -0.2 -0.57 -0.07 -0.82 0.17 0.21 -0.11 -0.35 0.78 -0.08 -1.04 -0.27 -0.11 0.07 0.09 -1.06 -0.76 -0.16 -0.2 -0.95 -1.05 0.2 -0.13
-0.81 -1.94 -0.91 0.7 - -0.02 -1.2 -0.63 -0.65 -0.61 -0.9 -1.68 0.3 -0.59 0.7 0.16 0.76 1.0 0.5 -0.08 0.25 -0.28 -0.36 -0.97 -0.86 -0.45 1.54 1.57 0.38 -5.65 -0.08 -0.51 -0.42 -0.96 0.67 1.0 0.2 -0.27 1.26 -0.23 -1.28 -0.79 0.08 -0.82
- - - - - - -0.73 -1.4 -1.31 - -1.97 - -1.16 - - -2.43 - -3.53 -1.19 1.69 -0.16 2.78 -2.25 2.63 -0.59 -2.82 -0.57 - 1.42 - 1.87 - 0.03 - - 2.84 - - -0.46 -1.76 -2.04 2.07 0.82 -0.8
-0.15 -0.37 -0.41 0.85 -0.17 -0.28 -1.19 0.27 -1.25 -1.35 -1.22 -2.55 -4.61 0.84 0.2 0.76 0.92 1.13 0.54 0.43 0.46 0.86 -0.07 -0.06 -0.51 -0.96 0.8 0.99 1.07 -4.91 0.27 -2.15 -0.07 -1.22 0.19 -3.36 -2.46 -1.39 0.95 0.13 -0.87 0.08 0.19 -0.18
-0.13 -0.09 0.11 0.26 -2.28 -0.01 -0.71 -0.34 0.15 0.19 0.21 -2.36 -6.1 -0.08 0.5 -0.34 0.04 0.27 0.14 -0.02 0.52 -0.79 0.33 0.61 0.14 -0.76 0.43 0.35 0.62 -2.69 0.12 0.35 0.12 0.84 0.09 -0.67 0.68 0.52 0.18 0.48 -0.58 -1.13 -0.27 -0.08
AT4G27920 (PYL10)
- - - -0.59 - - -1.68 - - -1.75 - 2.09 - 2.42 0.52 1.21 -2.67 -1.47 - - 1.82 -0.14 -1.22 - - 0.62 -1.29 -1.16 - - 2.65 -1.25 2.3 -1.32 - 1.93 - - 1.66 -0.77 - -0.18 0.16 -
0.55 -0.67 -1.68 - - - -2.0 -0.86 1.23 2.67 3.98 2.4 - - -0.71 -1.95 -2.94 -2.83 -1.49 - 0.41 - -0.3 -1.61 - -1.69 -2.76 -1.56 0.68 - -0.64 -1.63 -1.01 - - -1.59 - - -3.92 -0.87 - - 0.2 0.12
-2.09 -0.43 -2.11 -1.26 3.81 -3.49 -3.5 -4.28 -4.2 -2.46 -3.17 3.74 1.8 -2.99 -1.71 -1.14 -2.44 -1.58 -0.8 -0.9 -3.83 -1.17 -2.3 -1.29 -5.34 -1.49 -1.02 - -5.26 -2.87 -2.76 -1.86 -2.3 -1.07 0.55 -1.43 1.38 - -4.04 -5.15 -1.93 -1.69 -5.26 -3.75
-1.09 -0.12 -0.65 -0.77 -2.13 -1.37 -1.26 -0.2 -0.01 0.03 0.22 0.02 1.14 -0.86 0.08 -1.6 -1.25 -0.89 -0.86 -0.72 0.15 0.54 -0.35 -0.4 -1.32 -1.26 -0.17 -0.26 0.02 -5.67 -0.3 -0.79 -0.1 0.97 -0.49 3.37 -0.61 -1.25 -0.68 -0.75 -1.36 0.44 0.28 -0.37
-1.33 -0.8 -1.63 -1.78 1.43 -1.35 -0.55 -1.04 0.38 0.17 0.52 -0.98 -1.73 -0.1 0.12 -0.06 -0.2 0.23 0.05 -0.2 0.73 0.33 0.17 -0.46 -1.24 -0.66 1.27 0.03 0.17 - -0.0 -0.22 0.13 1.16 -1.31 0.27 -0.08 -0.57 -0.56 1.43 -0.71 0.36 0.48 0.14
0.01 1.02 0.01 -0.31 -0.35 -0.97 -1.02 0.59 0.98 1.2 1.15 0.25 -0.35 -0.44 0.56 -1.54 -0.96 -0.7 -0.51 -0.65 -0.04 -0.16 -0.74 -0.3 -1.4 0.3 -0.25 -0.68 -0.61 0.71 0.32 -0.03 -0.58 0.21 -1.13 -0.43 0.91 -0.16 1.11 -0.42 -0.92 -0.99 -0.59 0.15
AT5G08160 (PK3)
1.21 0.85 1.69 0.83 2.2 1.21 -0.4 -1.71 -1.29 -0.98 -1.1 -3.06 0.29 0.21 -0.9 -0.3 -0.04 -0.15 -0.07 -0.69 0.16 -0.66 -0.72 -0.28 0.32 -1.29 -0.01 0.17 -0.1 -2.33 -0.01 -3.15 -0.21 -0.84 -0.23 0.15 -4.67 -3.92 0.19 0.48 -0.48 -1.38 -0.6 0.28
AT5G09410 (CAMTA1)
-0.08 -0.49 0.33 0.31 0.37 -0.15 -0.51 0.37 0.84 0.69 0.82 0.41 -0.04 -0.22 0.63 -1.33 -0.7 -0.22 0.21 0.03 0.71 -0.17 -0.28 -0.06 -0.39 -1.35 0.52 0.36 0.17 -4.66 0.03 -1.72 0.22 0.14 0.38 0.34 -1.95 -1.89 0.29 -0.24 -0.57 -0.23 0.2 -0.07
AT5G19040 (IPT5)
3.57 3.3 1.44 -3.81 - -3.47 -4.0 -6.93 -3.51 -3.24 -3.53 -3.15 -5.04 -2.0 2.3 -1.31 -4.1 -5.43 -4.13 -0.19 0.12 -1.78 -3.32 -3.15 -2.89 -2.98 -4.57 -6.72 - -4.6 -1.13 -2.97 -0.64 0.25 -1.03 -6.7 -7.18 -7.37 -3.45 0.95 0.66 -3.4 -0.65 1.65
-0.54 -0.08 -0.72 -0.7 -0.39 -0.96 -1.28 0.36 0.58 0.82 0.81 0.63 1.43 -0.66 0.26 -0.97 -0.73 -0.4 -0.89 -0.96 -0.09 -0.09 -0.39 -0.77 -0.86 0.89 -0.31 -0.24 -0.0 0.77 -0.49 -0.27 -0.65 0.41 -0.31 1.92 -0.16 -0.76 -0.18 -0.33 -0.67 -0.92 -0.23 -0.18
0.83 -1.37 -1.16 1.69 -4.57 0.91 -0.6 0.21 0.42 0.61 0.51 -2.21 -1.95 -0.5 0.43 0.32 0.5 0.68 0.49 -0.02 -0.12 -0.24 -0.56 -1.78 -1.82 -0.91 0.74 0.5 -0.78 -9.2 -0.45 -0.13 -0.93 -1.29 0.14 0.92 -0.11 -0.11 0.59 0.65 -0.88 -0.18 0.03 -0.37
AT5G59420 (ORP3C)
-0.93 -0.03 -0.51 -1.45 1.38 -1.42 -1.42 0.55 1.26 1.57 1.63 -0.34 2.09 -0.52 0.83 -1.07 -0.96 -0.95 -1.07 -1.54 0.1 -0.19 -0.83 -0.7 -0.84 -0.56 -0.52 -0.45 -0.57 -5.95 -0.74 -0.83 -0.78 1.37 -0.79 0.83 -1.03 -1.7 -0.54 -0.54 -0.92 -0.66 -0.29 -0.03
AT5G62090 (SLK2)
-1.02 -0.85 -1.04 -0.7 -1.88 -1.43 -1.18 -0.07 0.74 1.36 0.63 2.55 1.26 -0.56 0.54 -0.47 -0.13 0.39 -0.34 -0.56 -0.02 -1.73 -0.47 -0.36 -0.9 -1.25 0.84 0.83 -0.22 - -0.55 -1.07 -0.51 0.0 0.61 0.48 -1.04 -1.69 0.52 -1.22 -1.11 -2.02 0.42 -0.81
AT5G62640 (ELF5)
-0.26 -0.56 -0.19 -0.08 1.69 0.11 -0.84 -0.33 -0.07 0.17 0.41 -0.18 1.64 -0.54 -0.31 -0.36 -0.22 0.13 0.16 -0.1 -0.28 -0.46 -0.59 -0.52 -0.65 -0.66 0.12 0.33 -0.47 -2.33 -0.62 0.05 -0.88 -0.03 0.74 0.48 0.61 -0.39 0.0 0.13 -0.53 -0.66 0.12 -0.29
AT5G64930 (CPR5)
-0.28 0.83 -0.06 -0.19 0.11 -0.88 -1.02 0.87 1.08 0.97 1.16 -1.04 -0.01 -0.43 0.79 -0.66 -0.27 0.02 -0.61 -0.86 -0.16 -1.0 -0.71 -0.3 -0.68 0.13 0.27 0.25 -0.24 -0.45 -0.46 -0.47 -0.7 0.51 0.03 0.8 -0.21 -0.46 -0.03 -0.44 -0.63 -1.69 0.4 0.4

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.