Heatmap: Cluster_233 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
-0.75 2.99 - -0.13 5.18 - 0.78 -2.09 - - - - - - - - - -4.37 - - - - - - - - - - - - - 0.21 - - - - - - - - - - - - - - - - -
-1.23 1.3 -3.22 2.03 2.12 -1.98 0.64 0.66 -1.77 -0.77 -0.86 -3.47 1.14 3.45 0.71 1.14 0.47 0.75 0.83 -1.15 -2.38 -2.22 -2.38 -4.1 - - -2.18 - - -1.78 -2.28 -3.93 -1.98 - - -0.44 - - -1.2 -4.75 -4.6 - -3.01 -1.49 -1.45 - 2.41 -0.13 -1.41
- 3.81 - - 5.13 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.79 3.31 -0.51 -2.43 3.91 3.5 -2.3 -3.29 -0.17 -1.95 -1.98 - 0.04 -0.27 - - 0.74 -0.82 - -4.23 -3.94 - - -1.7 - - - - - - - - - - -0.01 - - - - - - - - -0.99 - - - 0.36 0.11
-1.04 3.47 - 3.01 2.78 - 2.03 1.29 - - -1.74 - -0.04 3.38 - - - -1.12 - -0.36 - - - - - - - - - - - - - - - - - - - - - - -0.61 0.38 0.19 - - - -
-0.69 2.4 - 1.82 4.59 3.61 -2.47 0.39 -1.67 -1.8 -4.44 - -1.84 - - - - -5.57 - - - - - - - - - - - - - -1.75 - - - - - - - - - - - -0.84 - - - - -
1.12 3.75 - 2.91 4.66 - - - - -0.67 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.52 3.78 - 3.59 3.97 - -2.75 -0.42 -1.43 - -0.23 - - -0.54 - - -1.41 - - -0.1 - - - - - -23.79 - - - - - - - - - - - - - - - - - -0.85 - - - - -
1.64 4.13 -0.15 - 3.12 -0.55 1.59 3.23 0.09 - -2.56 0.34 - - - - - -2.58 - - - - - - - - - - - - - - - - - - - - - - - - - - 0.7 - - - 0.51
-1.65 1.46 - 3.33 2.22 2.49 1.56 0.86 - - -4.37 0.09 - 4.3 - - - - - - - -4.0 - - - - - - - - - - - - - - - - - - - - - - - - - - -
-3.57 1.71 - 4.1 2.51 - 2.24 1.87 - - -5.5 -0.28 - 3.76 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 3.24 - 3.52 4.67 0.16 -1.44 0.15 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.69 3.44 - 0.34 3.6 - -0.31 0.83 - -1.87 -2.4 - - 3.66 - - -0.64 -2.96 - - - - - - 1.87 - - - - - - - - - - - - - 1.4 - - - - -1.27 0.37 - - - -
-3.48 0.22 -5.49 2.75 1.16 0.44 -0.37 0.18 -3.61 -3.97 -2.47 -3.91 -3.97 3.18 - - -3.56 -0.59 1.38 -5.89 - -6.27 - - -2.77 -3.17 -4.18 - - - - - - - - - - - - - -7.67 -6.81 - 2.38 -0.41 -1.74 3.58 1.98 -3.13
- 2.8 - - 5.14 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -0.69 2.6 - - - -
-2.29 3.4 0.1 3.88 4.37 - - - - - 0.51 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -1.26 - - - - -
-1.35 4.53 - 1.3 3.95 - - - - - -4.35 - - - - - - - - - - - - - - - - - - - - 0.57 - - - - - - - - - - -0.35 - - - 2.38 - -
-1.38 4.23 - - 4.27 - - - - - -2.13 - - 3.33 - - - - - - - - - -2.18 - - - - - - - - - - - - - - - - - - - - - - - - -
0.54 4.52 - - 2.86 - - - 1.89 - -2.61 -0.45 1.37 2.22 - - - -1.23 - -4.24 - -2.69 - -1.38 - - - - - - - - - - - - - - - - - - - - 0.82 - - 1.48 -
-1.32 3.12 - - 4.2 - - -1.79 - - -1.1 1.09 - 3.35 - - -0.38 0.19 - -1.64 -2.8 - 0.62 - - - - - - - - - - - - - - - - -2.9 - - - 1.32 - - - -0.21 0.03
- 2.37 - 1.79 - 3.49 - - - - - - - 4.86 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-4.82 0.06 - 2.9 4.5 0.38 -0.26 -0.55 -0.62 - -2.86 - - 3.83 - - - - - - -5.07 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.71 3.47 -0.15 -0.08 4.4 1.95 0.41 -0.52 -0.96 -4.61 -0.96 - 0.27 0.8 - - -0.84 -0.1 - -2.37 -4.64 -4.44 -5.9 - -0.87 -0.42 -1.38 - - - -2.07 -4.07 - - - - - - - - -5.77 - - -5.24 - -1.77 -1.62 - -
-4.79 2.32 - 0.29 4.5 - 3.41 3.04 - - -5.25 - - -0.71 - - -0.56 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.54 3.45 - - 4.75 - - - - - -2.1 - - 2.1 - - - - - - - - -1.46 - - - 2.12 - - - - 0.37 - - - - - - - - - - - - - - - - -
1.17 3.38 - - 4.6 - -2.23 -2.23 -0.02 -2.47 -1.78 1.01 - - - - -1.26 -0.27 - -0.48 -1.83 -0.41 - -3.31 - - - - - 1.23 - 0.07 - - - - - - - - - - - - - 0.7 - - -
-1.03 2.16 - 2.84 4.53 - 2.17 1.78 - -1.44 -1.79 - - -2.17 - - -3.6 -2.47 - -0.96 -2.87 - -2.8 - 0.49 - - - -0.22 - - - - - - - - -1.02 - -4.11 -2.74 -3.57 -3.12 -1.67 - - - - -1.18
-1.84 2.56 - 2.92 4.63 - 0.21 2.76 - - - - - - - - - 1.33 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.38 2.72 - 2.19 4.89 - 0.78 0.05 2.18 - -3.27 - - - - - -0.93 - - - - - - - - - - - - - - - - - - - - - - - -2.41 - - - - - - - -
-1.92 2.85 - 2.35 3.01 1.64 -1.25 - - - - - - 4.63 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.99 1.25 -2.12 2.34 2.91 -1.42 2.48 3.02 -0.81 - -4.51 - - 4.04 - - -3.35 -4.52 - - - -4.03 - - - -0.05 - - - - - -0.88 - - - - - - - -3.5 - - - -1.64 - - - - -
-2.76 2.09 - 1.72 4.64 -0.79 -2.68 -1.68 0.3 - -2.16 - - 3.8 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-3.14 4.12 -2.21 - 4.97 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.32 2.78 - 0.86 4.54 - -0.01 - 2.03 - -0.1 - - - - - - - - - -1.94 -1.85 - -1.6 - - - - - - - 1.3 - - - 1.6 - - 1.45 -2.12 - - -0.91 - - - - - -
0.79 2.47 -0.52 0.36 4.29 2.61 -2.47 -2.05 -0.26 -4.78 -4.0 -1.46 0.06 -0.22 1.46 - -0.51 0.45 - -0.89 -4.25 -3.77 -3.35 - - -0.38 - - - - - -1.26 - - -1.43 -0.52 -1.59 - - - - - -4.44 0.19 0.12 - - - -
-2.2 2.94 - 2.48 5.12 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -0.34 - - - - -
-1.09 4.43 - 1.04 4.49 - - 1.28 - - - - - - - - - - - -5.12 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.81 2.42 - - 5.1 - - 2.57 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.2 1.42 -1.85 -2.54 4.55 -0.47 -0.9 -1.72 -3.55 1.04 1.33 -0.06 -0.07 -0.38 0.49 - -0.05 -0.41 2.17 -1.58 -5.73 -6.41 -4.89 -6.08 - -0.97 -0.08 - - - - -4.59 - - - - - - - - -6.59 - - -0.77 -0.37 -1.44 - - -
-0.19 3.87 -1.07 -1.43 2.42 1.45 -3.84 -4.07 -1.18 -3.85 -1.61 -3.2 -0.88 -0.88 -3.05 -0.81 -0.28 -2.04 -0.48 -1.77 -3.65 -2.65 -0.8 -1.91 - -1.06 -1.76 -1.83 -3.96 - -2.96 -2.95 - - -1.78 -7.12 -3.65 -2.04 -2.67 -4.32 -4.79 -3.12 -2.69 0.74 0.9 1.63 0.56 2.26 1.68
-5.64 1.08 - 3.68 3.23 1.68 2.74 2.87 -0.63 - -6.27 - - 2.76 - - - - - -7.67 - - - -5.03 - - - - - - - - - - - - - - - - - - - - - - - - -
0.11 0.5 - -1.28 4.66 2.84 - - -1.05 - - - - - - - - - 3.71 - - -3.18 - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.85 3.47 - - 4.39 - -1.19 - - 1.16 0.76 2.9 - - - - -1.34 -2.08 - -1.05 - - - - - - - - - - - - - - - - - - - - - - - -1.22 - - - - -
-2.75 2.51 - - 3.94 - 0.21 0.97 - - -3.3 - - 4.57 - - -3.8 -1.61 - - - - - -3.64 - - - - - - - - - - - - - - - -3.65 - -2.77 - -4.7 - - - - -
-0.65 4.37 - - 3.09 - - - 0.38 - -4.19 - - 4.16 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.69 2.33 -2.55 3.58 4.06 1.61 1.86 2.42 -1.7 -2.91 -4.02 -1.23 - - 0.08 - -4.47 -4.34 - - -4.84 - - - - - - - - - - -4.19 - - - - - - - - - -3.67 - -1.9 - - - - -
0.22 4.17 0.6 - 4.55 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.27 - - -
-0.83 2.98 0.15 2.09 3.55 - 1.32 0.99 - -2.42 -3.11 - - 4.05 - - -1.44 -2.94 - -0.46 -2.78 - - - - - - - - - - -0.88 - - - - - - - - - - - -2.21 - - - - -
0.22 4.79 - - 4.24 - - - -0.46 - -1.8 - - - - - - -2.59 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-3.5 -2.22 -3.8 3.75 3.06 -1.18 -2.12 -1.57 -3.02 -5.29 -0.11 -3.98 2.34 3.76 - - - -0.84 - -0.41 -0.62 -5.72 -3.11 -7.42 - - - -0.51 -3.48 -1.85 -2.11 -1.19 -0.76 -3.01 - -1.85 -3.51 -2.65 -0.3 -5.81 -4.81 -4.88 -5.17 -4.0 - -4.49 - - -
-0.22 3.64 -0.77 - 4.9 0.57 - -2.32 -0.91 -2.56 -2.23 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.28 0.61 - - -
0.1 4.61 - - 4.29 - - - - - - - - 1.97 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.76 3.15 -1.49 - 4.53 - - - - -3.28 -1.6 - -0.82 0.38 - - -2.63 -2.91 3.03 -0.98 - - - - 1.46 - - - - - - -0.74 - - - - - - - -3.7 - -2.04 - -4.11 - -0.45 - -0.31 -
-4.57 2.27 - 1.11 3.85 - 0.19 -2.87 - -2.11 -0.73 - - 4.55 - - - -0.27 - - - -3.34 - - - - - - - - - - - - - - - - - - - - - - 0.14 - - - -
-0.91 3.83 - 0.23 4.77 - - - - - -3.05 - - - - - - - - -0.0 - - - - - - - - - - - 2.07 - - - - - - - - -0.95 - - - - - - - -
-1.02 3.32 - - 4.99 1.03 -0.37 -1.37 - - - - - - - - - - - - 0.39 - - - - - - - - - - - - - - - - - - -1.1 -0.53 - 0.14 - - - - - -
-8.12 -1.71 - 3.51 3.14 1.18 1.41 2.29 - -5.03 -4.72 - - 3.9 - - - 1.81 - -10.1 - - - - - -3.56 -3.27 - - - - - - - - - - - - - - - - - - - - - -
- 2.06 - 2.55 4.48 3.25 -0.42 1.32 - -2.98 -2.17 - - 0.65 - - - -5.14 - -5.9 -3.98 - - - - - - - - - - 0.14 - - - - - -0.76 - - -2.81 - - - - - - - -
-0.73 0.34 0.51 3.31 3.5 -2.27 0.36 1.09 -2.3 -2.91 -1.66 -0.21 -4.94 4.03 -0.96 -1.95 -3.45 -3.46 - -1.58 -7.95 -6.78 -5.28 -7.32 -2.9 -2.77 -1.96 - - -3.85 - -4.42 - - - -3.08 -3.98 -4.32 - -6.58 - -5.07 -5.58 -4.13 -2.0 -2.61 -4.38 -3.09 -2.9
1.19 3.48 -0.12 - 3.8 2.36 -0.54 -1.86 - - 2.38 - -0.98 -0.47 1.47 - -1.42 0.83 - -6.64 - - -2.48 -3.53 - - 0.16 - - - - -0.56 - - - - - - - - - - -2.58 -2.55 -0.26 - - - -
0.71 3.5 -0.18 -1.14 4.09 0.06 -1.34 -0.01 -1.07 - 0.71 -0.57 - 3.12 - - - -0.47 - - - - - -1.89 - - - - 1.45 - - - - - - - - - - - - - - - - - - - -
-2.82 0.1 -1.27 1.22 4.79 3.53 -4.46 - - -3.11 -1.19 -1.58 -2.57 1.53 - - -2.34 -0.55 - - - - - -2.88 - -1.38 - - - - - -2.16 - - - - - - - -4.71 - - - -2.57 - - - - -
-1.13 2.3 - 2.98 4.02 - -1.76 -0.17 - - - -0.11 - 4.12 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-4.2 2.08 - 2.95 3.75 - 0.86 1.9 -1.05 - - - - 4.06 - - - - - - - - - - - - - - - - - -1.15 - - - - - - - - - - -1.71 - - - - - -
0.55 3.38 0.32 2.84 3.26 -1.49 0.04 0.33 - -1.68 1.24 - -1.0 2.39 - - -0.57 -0.2 - -2.63 -4.96 -4.98 -4.03 - 0.13 -1.3 - - -1.21 - - -3.07 - - - - - - - -4.39 -4.9 -2.92 -2.83 -0.43 -0.67 -0.99 -1.27 0.65 -
-4.76 -0.29 1.03 3.55 2.83 -0.37 -0.29 -0.23 -6.11 - -0.9 - 3.15 3.58 - - -3.25 -5.64 - -7.77 -8.34 - - - - - -3.75 - - - - - - - - - - - - - -8.17 -7.14 - -6.06 -3.83 -3.62 0.46 -0.3 -0.14
- 3.37 - - 4.35 - 1.16 2.06 - 1.14 -3.15 - - 2.72 - - 1.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.83 3.41 -1.7 -0.27 2.69 - -1.6 0.53 -1.5 - 0.35 - -1.7 4.21 - - -1.92 -4.36 - -7.69 -3.05 - -4.1 - - - - - - - - - - - - - - - - - - - - 2.73 -1.32 -1.33 - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.