Heatmap: Cluster_367 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Cambium and expanding xylem
Cambium
Expanding xylem
Expanding and mature xylem
Maturing xylem
Maturing xylem and dead early wood
Wood
Dead early and late wood
Dead early wood
Dead late wood
Vegetative shoots - needles
Vegetative shoots - stem
Vegetative shoots
Girdled twig - stem
Dried twig - needles
Girdled twig - needles
Needles
Needles - dawn
Needles - later afternoon
Needles - midday
Needles - night
Buds
Female flower
Male flower
Pineapple galls
Somatic germinants - abnormal type
Somatic germinants - normal type
Cell culture - H20 - 5 days
Cell culture - KI added - 5 days
Cell culture - KI added - 20 days
Cell culture - KI removed - 4 days
Cell culture - KI removed - 12 days
Cell culture - solid medium
-4.11 -4.21 -4.59 -4.38 -4.02 -4.08 -2.93 -4.47 -4.18 -3.16 1.21 -1.32 -0.01 -1.61 0.45 1.03 1.22 1.26 1.58 1.57 1.68 -1.97 -1.54 -2.33 -0.57 0.61 0.77 -0.36 -0.11 0.35 -0.11 0.01 0.49
-6.18 -7.37 - -8.17 -7.4 -7.59 -3.61 - - -9.0 0.94 -2.12 -0.42 -1.86 -0.15 0.93 1.63 1.44 2.04 1.37 1.99 -2.13 -1.61 -2.68 -0.36 0.29 0.5 -0.47 -0.16 0.36 -0.32 0.18 0.55
-3.27 -5.02 -6.34 -5.19 -4.88 -6.57 -3.49 - -7.77 -2.99 1.55 -1.66 0.23 -2.35 -0.57 1.33 1.25 1.47 1.45 1.89 1.53 -3.31 -2.57 -2.61 0.25 -0.15 0.58 0.04 -0.23 0.0 0.26 0.06 0.23
-2.76 -2.66 -3.56 -3.41 -2.88 -2.48 -1.3 -3.17 -3.13 -2.95 0.94 -0.29 -0.14 -0.97 0.53 0.86 0.96 1.07 1.29 1.19 1.45 -0.51 0.12 -0.68 -0.46 0.57 0.68 -0.17 -0.05 0.01 -0.08 0.18 0.46
-4.87 -4.96 -6.34 -6.66 -5.82 -5.69 -4.58 - -7.35 - 1.2 -1.85 -0.1 -1.9 -0.01 1.05 1.28 1.65 1.69 1.98 1.94 -2.29 -2.15 -2.79 -0.17 0.2 0.37 -0.32 -0.46 0.22 -0.19 -0.25 0.13
-1.86 -2.73 -1.59 -2.2 -2.41 -2.38 -1.47 -3.15 -3.05 -2.21 1.26 -0.17 -0.61 -0.54 0.32 1.48 0.51 1.37 1.38 1.64 1.47 -1.18 -1.37 -1.49 0.08 0.42 0.64 -0.46 -0.53 -0.14 -0.48 -0.43 -0.42
- - - - - - -8.8 -10.3 - - 2.0 -1.47 1.44 -2.34 -0.74 1.7 1.64 2.07 1.73 1.58 1.73 -2.27 -2.24 -1.87 1.32 -1.42 -1.04 -3.65 -3.58 -2.54 -2.93 -2.11 -2.54
-5.39 -5.56 -4.41 -5.01 -4.26 -4.47 -2.86 -5.59 -5.01 -6.3 1.51 0.35 0.68 -0.56 -0.65 1.12 1.32 1.5 1.52 1.31 1.41 -0.66 -0.79 -0.98 0.98 -0.85 -0.49 -0.51 -0.59 -0.18 -0.25 -0.4 0.28
-3.67 -3.56 -4.39 -3.32 -3.41 -3.11 -0.93 -5.02 -4.29 -4.74 1.3 -1.21 0.04 -2.21 -0.39 1.39 1.57 1.16 1.74 1.23 1.38 -2.11 -0.52 -3.0 -0.46 -0.39 0.12 -0.32 0.39 0.67 0.04 0.08 0.47
-6.55 -6.79 -5.66 -5.96 -7.62 -7.4 -3.17 -6.83 -8.1 -7.12 1.25 -1.46 -0.05 -2.4 0.64 0.94 0.77 1.11 1.88 1.73 1.75 -3.36 -1.61 -2.05 0.03 0.48 0.81 -0.14 -0.11 0.31 -0.09 0.06 0.44
-1.47 -1.82 -2.34 -2.28 -2.13 -2.2 -0.86 -1.53 -2.3 -3.46 1.04 -0.49 0.15 -0.26 0.27 1.01 1.41 1.33 1.49 0.65 1.03 -0.23 0.74 0.34 0.83 -0.58 -0.35 -0.61 -0.84 -0.43 -0.72 -0.68 -0.75
-3.45 -4.13 -2.26 -2.27 -1.95 -2.88 -1.9 - -5.66 -6.33 1.9 -0.08 1.41 1.05 -1.01 1.42 1.53 0.68 1.23 1.58 1.3 -0.53 -1.03 -0.38 1.66 -1.24 -0.34 -4.66 -4.25 -2.39 -4.24 -3.32 -3.39
- - - - - - -10.3 - - - 1.83 -1.23 0.98 -1.7 -0.5 1.41 1.95 1.89 1.6 1.85 1.7 -2.27 -2.11 -2.72 1.11 -0.45 -0.13 -2.7 -2.85 -1.8 -2.33 -1.32 -1.6
-3.57 -3.93 -3.85 -3.41 -3.24 -2.52 -2.45 -3.73 -2.8 -3.36 1.23 -0.98 0.7 -1.57 0.4 1.0 1.58 1.09 1.43 1.31 1.43 -1.72 -0.97 -1.64 0.25 0.54 0.62 -0.49 -0.39 -0.03 -0.27 0.09 0.12
-2.91 -2.88 -3.1 -3.52 -3.65 -3.54 -2.18 -4.4 -3.95 -4.18 1.14 -0.72 0.11 -0.95 0.45 1.02 1.14 1.01 1.74 1.58 1.63 -1.08 -0.71 -1.65 -0.05 0.36 0.37 -0.41 -0.26 0.18 -0.05 0.14 -0.32
-7.95 -4.27 - -5.82 -5.22 - -2.7 -5.73 -8.29 -4.49 1.5 -1.07 0.75 -1.35 0.59 0.99 1.03 1.7 1.31 1.13 1.59 -1.72 -0.28 -1.46 -0.08 0.07 0.33 0.05 -0.18 0.05 -0.23 0.29 0.11
-4.82 -4.71 -7.23 -8.77 -5.99 - -4.11 -6.75 -9.03 -10.25 2.02 -0.92 0.31 -1.87 -3.34 1.06 1.77 1.13 1.76 1.01 1.32 -2.5 -0.6 -2.88 -0.12 -0.23 0.18 -0.12 0.08 0.44 0.07 0.4 0.56
-1.82 -1.68 -1.02 -1.0 -1.16 -1.07 -1.73 -1.66 -1.63 -0.88 1.07 -1.05 -0.71 -1.23 0.54 1.02 0.7 1.33 1.28 1.26 1.36 -1.44 -1.06 -1.73 -0.68 0.57 0.85 -0.37 -0.43 -0.11 -0.09 0.08 -0.22
-3.99 -4.14 -4.12 -3.29 -3.48 -2.9 -1.06 -4.01 -3.7 -3.34 1.29 -0.12 -0.54 0.33 0.08 1.28 0.88 1.44 1.52 1.57 1.58 -1.1 -1.54 -1.56 -0.35 0.24 0.53 -0.56 -0.51 -0.17 -0.3 -0.27 0.17
-4.12 -4.36 -4.36 -3.53 -4.33 -3.87 -3.44 -5.15 -3.85 -4.01 1.36 -1.56 -1.13 -2.04 0.64 0.8 0.73 1.27 1.97 1.64 2.05 -1.98 -1.21 -2.24 -0.7 0.73 0.89 -0.61 -0.61 -0.01 -0.19 -0.11 0.18
-5.23 -4.88 -6.35 -7.18 -4.67 -6.13 -1.6 -5.11 - -5.3 1.05 -0.76 0.26 -0.91 -0.4 0.95 1.25 0.87 1.83 1.48 1.8 -1.14 -0.47 -2.42 -0.03 0.2 0.58 -0.28 0.05 0.27 -0.05 0.04 0.42
-11.79 -9.08 -9.8 -11.86 -11.09 -9.65 -7.58 -12.99 - -12.7 1.05 -2.16 0.71 -2.18 -3.68 0.6 2.0 1.23 1.7 1.29 1.58 -2.46 -1.85 -1.97 1.03 0.19 0.69 -0.15 -0.26 0.61 -0.43 -0.1 0.84
-4.78 -4.64 -4.25 -2.91 -3.12 -1.9 -3.62 -3.21 -3.2 -2.35 1.48 -1.17 0.11 -1.99 -0.84 0.9 1.3 1.76 1.53 1.67 1.56 -2.14 -2.87 -1.68 0.41 0.03 0.41 -0.21 -0.49 -0.18 -0.14 0.0 0.4
-5.0 -5.16 -5.11 -4.56 -4.69 -4.3 -3.03 -5.38 -5.28 -3.32 1.41 -1.51 0.21 -1.86 0.69 1.03 0.81 1.43 1.59 1.45 1.57 -3.34 -1.94 -1.65 0.04 0.25 0.64 0.0 -0.1 0.34 0.0 0.28 0.48
-3.03 -2.55 -3.25 -2.98 -3.28 -3.76 -1.25 -3.88 -3.69 -3.33 1.88 -0.46 -0.32 -0.9 0.63 1.38 1.04 1.7 1.82 0.36 1.89 -0.45 -1.2 -1.12 0.5 -0.21 0.26 -1.47 -1.01 -1.32 -1.05 -1.03 -0.81
-4.56 -4.21 -5.16 -4.12 -6.33 -5.36 -2.21 -5.0 -4.42 -6.32 1.44 -1.23 0.51 -1.59 -1.78 0.78 1.54 1.48 1.67 1.24 1.87 -1.71 -1.81 -1.16 -0.04 -0.01 0.34 -0.18 0.02 0.02 -0.08 0.0 0.66
- - - - - - -8.32 - - - 1.69 -1.66 1.43 -2.15 -0.86 1.54 2.38 1.64 1.42 1.6 1.57 -2.28 -1.81 -1.54 1.26 -1.07 -0.72 -2.52 -2.44 -1.76 -1.82 -1.08 -1.41
-5.55 -5.92 -6.3 -6.92 -6.71 -7.46 -5.75 - -7.65 -4.36 1.54 -1.46 1.53 -1.93 0.67 0.74 2.03 1.21 1.43 1.17 1.21 -3.73 -1.94 -1.21 0.69 -0.08 0.3 -0.41 -0.19 -0.17 -0.42 -0.61 0.03
-6.6 -6.44 -5.9 -5.65 -5.79 -5.07 -5.64 -5.46 -5.51 -4.13 1.64 -1.37 1.38 -2.27 -0.26 1.52 1.56 1.31 1.6 1.72 1.53 -2.2 -1.07 -2.07 0.43 0.07 0.25 -1.14 -0.85 -0.49 -1.06 -0.62 -0.38
- - - - - - -8.23 - - - 1.32 -5.22 0.5 -3.75 -3.46 -0.94 1.42 1.72 2.45 1.06 2.04 -3.24 -2.66 -0.79 2.18 -2.29 -1.93 0.06 -1.24 -0.73 -0.36 0.54 -0.79
-7.8 -8.14 -8.29 -6.92 -9.03 - -4.02 -8.22 -8.13 -8.74 1.82 -1.64 0.81 -1.43 -1.66 1.11 1.2 1.28 1.57 1.65 1.7 -2.12 -1.43 -2.43 0.47 0.06 0.5 -0.14 -0.26 0.06 0.02 -0.25 0.14
- - - - - - -9.05 - - - 1.4 -1.36 1.88 -2.82 -1.03 1.59 1.62 1.32 1.93 1.65 1.7 -1.71 -0.98 -1.3 1.21 -0.47 -0.31 -2.13 -1.79 -1.26 -1.94 -1.56 -1.7
-5.2 -5.38 -5.29 -7.67 -5.88 -6.2 -3.23 -7.56 -6.98 -8.81 2.17 -0.73 0.81 -0.99 -2.04 1.46 1.42 1.26 1.38 1.15 1.32 -1.86 -0.38 -1.91 0.13 -0.24 0.18 -0.35 -0.35 0.15 -0.17 -0.03 0.1
-3.33 -3.22 -4.42 -5.77 -4.0 -5.53 -3.4 -4.8 -4.86 -4.35 2.05 -0.84 0.16 -1.37 -2.19 1.02 1.7 1.68 1.36 1.08 1.19 -1.85 -0.46 -2.28 0.09 -0.34 0.15 -0.14 -0.23 0.23 0.07 0.14 0.38
-6.97 -7.17 -8.14 -7.74 -7.68 -7.11 -3.0 -8.36 -7.72 -6.11 1.1 -1.52 0.24 -1.63 -1.18 1.14 1.69 1.23 1.83 1.68 1.78 -1.85 -1.45 -1.79 -0.28 0.25 0.54 -0.21 -0.23 0.19 -0.3 -0.04 0.45
-1.54 -1.46 -2.22 -2.55 -2.31 -2.36 -3.34 -1.42 -2.42 -2.9 1.76 -1.56 -0.53 -0.66 0.74 1.29 0.98 1.94 1.78 1.51 1.84 -1.88 -1.25 -3.42 0.5 -1.1 -0.34 -1.4 -1.36 -1.32 -1.36 -1.27 -1.13
-7.69 -7.83 - - -9.83 - -3.95 - - -6.65 1.25 -1.85 0.04 -2.49 -0.66 1.85 1.42 0.84 2.14 1.86 1.82 -2.28 -1.34 -2.02 -0.53 0.07 0.36 -0.6 -0.49 0.06 -0.77 -0.53 0.3
-2.53 -3.18 -5.54 -5.11 -3.24 -3.89 -3.34 -1.03 -2.64 -1.61 1.64 -2.69 0.51 -1.68 0.14 1.56 1.21 1.49 2.08 1.45 2.3 -3.15 -4.47 -5.6 1.4 -1.51 -1.64 -1.47 -1.73 -1.73 -1.63 -2.27 -1.46
-2.66 -2.28 -1.64 -2.79 -2.66 -2.42 -1.56 -3.26 -2.81 -2.97 1.58 -1.19 0.52 -0.77 -1.22 1.21 0.97 1.4 1.3 1.11 1.32 -1.0 -0.84 -1.4 -0.35 0.18 0.27 -0.16 0.32 0.32 -0.16 -0.4 0.67
-1.6 -2.13 -2.12 -2.47 -1.97 -2.29 -1.09 -2.08 -1.74 -1.23 1.0 -0.41 0.2 -0.38 0.43 0.93 0.51 1.04 1.05 1.1 1.15 -0.55 -0.28 -0.87 -0.02 0.5 0.57 -0.07 -0.01 0.15 0.07 0.04 0.3
- - - - - - -5.22 - - - 1.51 -1.34 0.87 -1.0 -1.58 1.4 1.18 1.28 1.51 1.48 1.63 -1.2 -1.19 -2.89 0.24 -0.42 -0.01 0.0 0.01 0.34 0.01 -0.06 0.84
-6.06 -7.93 -4.43 -4.0 -3.5 -2.65 -2.95 -4.3 -3.82 -2.08 1.44 -0.03 1.41 -0.71 0.42 1.03 1.24 1.41 1.08 1.32 1.21 -2.49 0.22 -1.78 1.81 -0.87 -0.32 -1.34 -0.57 -0.42 -1.55 -1.52 -0.25
- - - - - - - -12.22 - - 1.9 -2.96 0.87 -3.19 -1.47 0.85 1.43 1.83 1.96 1.45 1.79 -6.47 -1.34 -2.39 2.17 -1.6 -1.13 -1.43 -1.61 -0.6 -1.25 -0.96 -0.97
- - - - - - -9.25 -11.16 - -9.76 1.94 -3.23 0.87 -2.69 -2.57 1.12 1.29 1.83 1.97 1.67 1.81 -5.02 -1.99 -2.41 1.66 -1.66 -1.26 -1.71 -0.67 0.03 -1.3 -0.81 -0.34
-3.2 -3.6 -3.4 -3.01 -2.49 -2.05 -2.87 -2.73 -2.45 -1.59 1.32 -1.79 -0.25 -1.7 0.55 0.75 0.95 1.41 1.38 1.34 1.38 -3.28 -2.14 -1.49 0.25 0.33 0.74 -0.04 -0.01 0.52 0.11 0.27 0.54
-3.29 -3.57 -3.68 -3.65 -3.76 -3.67 -1.13 -4.62 -4.39 -3.82 0.81 -0.74 0.02 -0.45 0.51 1.1 0.77 1.28 1.44 1.39 1.53 -0.9 -0.76 -0.28 -0.56 0.18 0.45 0.08 0.04 0.3 0.03 0.11 0.42
-3.63 -3.9 -2.94 -4.14 -3.53 -2.52 -1.95 -4.42 -3.79 -4.07 2.01 -0.68 0.26 -0.89 0.6 1.37 0.9 1.42 1.5 1.24 1.14 -1.95 -1.79 -2.61 0.18 0.06 0.29 -0.54 -0.55 -0.07 -0.27 0.12 0.27
-8.29 -7.43 - -5.19 -8.03 -6.13 -1.53 -6.85 -8.51 - 1.6 -1.66 0.39 -0.9 -1.04 1.01 0.97 1.26 1.59 1.22 1.52 -1.43 -1.46 -1.3 -0.66 0.1 0.29 0.35 0.48 0.57 0.18 -0.12 1.04
-2.63 -1.68 -2.16 -1.52 -2.39 -1.97 -2.14 -1.99 -2.73 -1.32 1.9 -1.51 0.83 -2.04 -0.65 0.91 1.11 1.69 1.39 1.19 1.24 -1.61 -1.01 -1.83 0.36 -0.55 -0.17 -0.41 -0.53 -0.0 -0.07 -0.08 -0.19
-1.37 -1.91 -1.29 -1.65 -1.37 -1.97 -0.22 -1.54 -2.45 -2.71 1.55 -0.87 0.29 -1.39 -0.96 0.77 1.55 1.52 1.54 1.12 1.67 -1.36 -1.27 -1.2 0.26 -0.21 0.21 -0.97 -0.67 -0.51 -1.11 -0.7 -0.5
-8.23 -7.14 - -8.94 -7.43 - -3.17 -8.0 -7.24 -7.45 1.88 -1.41 1.87 -2.45 0.25 1.39 1.22 1.89 1.87 2.11 1.6 -1.3 -0.92 -1.45 1.21 -3.91 -3.29 -4.5 -4.04 -4.54 -4.98 -3.73 -3.63
-3.26 -3.26 -3.88 -3.98 -4.35 -4.52 -1.65 -5.1 -4.63 -4.24 1.2 -0.46 -0.28 -1.17 0.54 1.13 0.54 1.08 1.32 1.31 1.59 -1.12 -1.02 -1.98 -0.37 0.42 0.52 0.08 0.37 0.64 0.24 0.26 0.68
-5.12 -4.45 -4.81 -4.55 -4.82 -5.43 -2.01 -5.57 -5.91 -5.76 1.01 -1.2 -0.71 -1.35 0.64 1.26 0.76 0.78 1.85 1.77 1.73 -1.32 -0.33 -1.81 -0.47 0.54 0.71 -0.19 -0.23 0.08 0.16 0.28 -0.09
-2.53 -2.56 -2.83 -2.95 -2.93 -2.52 -1.43 -3.14 -2.87 -2.32 1.1 -0.53 0.07 -0.66 1.07 1.23 0.79 1.23 1.37 1.44 1.4 -0.78 -0.61 -1.72 0.09 0.05 0.16 -0.51 -0.09 0.17 -0.41 -0.42 0.32
-1.77 -1.43 -1.7 -1.39 -1.14 -0.69 -1.29 -1.77 -1.11 -1.48 1.34 -0.55 -0.1 -0.91 0.06 0.57 1.19 0.88 0.81 0.94 1.16 -1.52 -1.44 -2.23 0.37 0.1 0.26 -0.1 -0.05 0.29 0.1 0.48 0.77
-4.74 -5.32 -6.36 -4.87 -5.32 -5.04 -2.97 -5.47 -4.7 -3.5 0.96 -1.34 -0.34 -1.65 0.5 1.28 0.67 1.22 1.58 1.16 1.5 -1.39 -0.89 -1.27 -0.15 0.32 0.46 0.58 0.54 0.36 0.5 0.53 0.41
- -5.2 -7.43 - -7.33 - -4.0 - - -4.98 0.85 -1.73 -0.35 -3.61 -2.44 0.92 1.48 1.39 1.74 2.07 2.1 -2.28 -1.43 -2.05 -0.36 0.51 0.79 -0.6 -0.23 0.16 -0.38 -0.01 0.55
-2.48 -3.38 -3.0 -3.43 -2.94 -2.64 -1.68 -3.2 -3.42 -3.37 1.18 -0.71 -0.38 -0.44 0.77 0.95 0.55 1.17 1.41 1.11 1.56 -1.02 -0.97 -1.96 -0.46 0.53 0.54 -0.01 0.26 0.37 0.13 0.19 0.59
-4.96 -4.63 -5.39 -10.14 -6.41 -5.21 -4.58 -6.27 -6.53 -5.75 1.67 -2.38 1.18 -2.22 -1.56 0.47 1.47 1.82 1.54 0.96 1.57 -1.65 -1.15 -1.32 1.03 0.23 0.74 -0.36 -0.35 -0.06 -0.26 -0.57 0.05
-4.06 -3.51 -3.54 -4.65 -3.89 -3.54 -3.43 -3.89 -4.22 -3.91 1.3 -1.1 0.3 -0.8 -0.57 1.15 1.04 1.42 1.49 1.71 1.69 -1.12 -0.95 -1.86 0.07 0.48 0.71 -0.42 -0.28 0.08 -0.12 -0.19 -0.21
-6.19 -5.86 -8.79 -7.09 -6.47 -5.83 -3.39 -7.52 -7.49 -5.1 1.33 -1.01 0.14 -1.96 -0.47 1.32 1.27 1.34 1.58 1.69 1.65 -2.18 -2.16 -1.86 0.44 -0.01 0.37 0.1 -0.53 0.11 0.04 0.21 0.6
-5.31 -6.46 - -6.0 -8.54 - -1.43 - -5.78 - 1.46 -0.92 0.26 -0.13 0.68 1.38 1.18 1.37 1.55 1.79 1.02 -1.12 -1.66 -2.4 0.03 0.25 0.32 -0.52 -0.3 -0.24 -0.64 0.35 -0.01
-2.83 -2.78 -2.21 -1.93 -2.35 -1.96 -2.57 -2.42 -2.82 -1.26 1.21 -1.4 0.27 -1.66 -1.05 0.73 1.62 1.62 1.6 1.48 1.56 -1.75 -1.46 -1.59 -0.21 -0.08 0.28 -0.41 -0.33 0.14 -0.38 -0.1 0.29
-2.04 -3.0 -2.54 -3.44 -3.88 -3.78 -0.48 -4.16 -3.4 -4.96 1.17 -1.09 0.46 -2.22 0.29 0.44 1.45 1.04 1.31 1.41 1.34 -1.57 -0.64 -0.43 0.35 0.22 0.44 0.09 -0.22 -0.01 -0.21 0.21 0.61

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.