Heatmap: Cluster_549 (HCCA cluster)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Cambium and expanding xylem	Cambium	Expanding xylem	Expanding and mature xylem	Maturing xylem	Maturing xylem and dead early wood	Wood	Dead early and late wood	Dead early wood	Dead late wood	Vegetative shoots - needles	Vegetative shoots - stem	Vegetative shoots	Girdled twig - stem	Dried twig - needles	Girdled twig - needles	Needles	Needles - dawn	Needles - later afternoon	Needles - midday	Needles - night	Buds	Female flower	Male flower	Pineapple galls	Somatic germinants - abnormal type	Somatic germinants - normal type	Cell culture - H20 - 5 days	Cell culture - KI added - 5 days	Cell culture - KI added - 20 days	Cell culture - KI removed - 4 days	Cell culture - KI removed - 12 days	Cell culture - solid medium
MA_44659g0010	-1.42	-1.25	-1.2	-0.96	-0.81	-0.46	0.04	-0.85	-1.39	-0.85	-0.03	0.18	0.22	0.34	0.01	0.14	0.02	0.51	0.1	-0.02	0.02	0.17	0.3	-0.13	0.23	-0.04	0.13	0.34	0.96	0.61	0.47	0.11	0.65
MA_8861g0010	-1.12	-1.37	-1.06	-1.02	-0.42	-0.26	0.25	-1.07	-0.86	-0.87	-0.47	0.25	0.44	0.2	-0.15	-0.11	-0.05	-0.78	-0.71	-0.56	-0.83	0.46	0.46	0.48	0.06	0.11	0.18	0.51	0.84	0.88	0.74	0.43	0.78
MA_938778g0010	-0.93	-1.05	-1.2	-0.86	-0.63	-0.18	0.08	-0.92	-0.68	-0.86	-0.17	0.16	0.14	0.33	0.57	0.32	-0.27	-0.02	-0.17	-0.03	-0.02	0.24	0.0	-0.17	0.18	0.1	0.19	0.41	0.66	0.61	0.43	0.27	0.62

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.