Heatmap: Cluster_129 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
-4.08 3.04 -2.01 3.97 -1.18 - 2.04 2.72 -0.09 - -0.33 - - 2.84 - - - -3.82 - -4.46 -3.69 -5.21 -5.92 -3.11 - - - - - - - - - - - - - - - -4.8 - - - -0.74 - -2.2 - - 1.81
-4.94 1.46 -1.55 3.81 1.12 0.33 3.75 3.77 -4.36 -5.06 -3.94 - - -2.61 - - - -3.23 - - - -4.84 - -5.98 - - - - - - - - - - - - - - - - - - - - - -2.88 -0.53 - -
-0.53 3.02 -0.31 4.44 2.77 0.14 -0.74 1.58 2.02 - -0.73 - - - - - - -3.95 - - -2.84 - -2.62 - - - - - - - - 0.15 - - - - - - - - - - - - - - - - -
-1.38 2.59 -0.4 2.48 2.14 -0.84 3.99 3.92 - - -8.68 - - - - - - -4.06 - - -4.04 - -4.33 - - - - - - - - - - - - - - - - - - - - -4.14 - - - - -
-4.2 -0.43 0.2 3.99 1.23 -5.16 3.53 3.44 -1.18 -1.57 -1.3 -2.23 -4.31 -2.59 - - -0.67 -1.7 -1.63 -4.68 -6.43 -6.09 -7.01 -5.3 -2.37 -4.27 -3.23 - - -4.24 -4.99 -5.66 -5.82 - -4.86 -6.09 -5.95 - - -6.93 -5.35 -6.01 -7.14 -2.08 0.46 -0.55 -2.12 -2.25 -4.88
0.01 1.8 -2.37 3.06 0.77 -1.52 3.27 3.92 -0.84 -5.84 -4.06 - - - - - -5.81 -6.36 - -5.0 -5.84 -5.17 -6.58 -2.47 - - - - - - - -2.71 - - - - - - - -6.14 -5.74 - - -6.29 -2.59 -3.11 1.94 1.92 -2.78
-3.51 3.96 - 3.92 - - -1.91 - -0.43 -1.15 -1.07 0.45 - - - - - -0.28 - - -2.31 - - - - - 1.15 - 3.08 1.29 - - - - - - - - - -0.83 -2.51 - - - - - - - -
-1.41 2.93 - -0.67 2.46 - 3.66 4.04 -0.84 -3.4 -2.07 - - - - - -2.37 -0.62 - -4.91 -2.61 -2.1 -3.64 -1.04 - - - - - - - - - 0.45 0.38 - - - - -3.32 -3.5 - - -2.23 - - - - -
-0.0 2.54 0.09 4.36 2.8 0.94 3.09 1.71 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.85 0.75 0.21 4.17 2.82 -3.45 2.85 3.42 -1.38 -3.8 -3.7 - -4.17 -3.66 -1.67 - -1.07 -1.37 - -7.27 -6.47 -4.09 -7.28 -4.54 - -2.06 - - -2.26 - - - - - - -2.86 - - - -6.38 -5.57 - -5.52 - - -3.56 -2.95 - -
-5.83 -1.32 -1.91 4.44 0.27 1.59 3.43 3.54 - -5.91 -6.65 - - - - - -5.0 -11.87 - -11.28 - - - - - - - - - - - - - - - - - - - - - - - -9.77 -7.76 - - - -
-2.75 2.47 -5.74 3.53 1.85 -3.02 2.09 2.18 0.59 -5.63 -3.02 -2.85 -0.49 -0.2 -4.82 -4.8 -2.04 0.64 - -2.7 -1.45 -2.22 -1.79 -1.9 -1.52 -6.22 - -1.82 -1.72 -1.52 -2.25 -1.83 -2.64 -2.86 -2.65 -2.38 -2.33 -1.54 -1.47 -3.59 -4.19 -2.96 -3.38 -3.76 -1.15 -1.63 2.39 1.38 -1.58
0.31 3.52 -3.28 4.1 0.05 2.66 -1.59 -3.58 -2.11 -0.24 0.58 - -0.37 -1.75 - - -1.76 -1.03 - -2.63 - -2.52 -2.53 -3.81 0.91 -0.66 - - - - - -2.29 - - -0.29 - - - - - -2.79 - - -0.27 - - - - 0.82
-1.3 3.11 -0.09 4.04 1.15 - 2.02 3.23 - - - - 2.79 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-3.69 2.26 - 4.58 2.18 1.87 2.55 2.34 - - - - - 0.19 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-5.18 -0.8 -7.09 4.33 1.25 -3.05 3.5 3.44 -0.46 -5.76 -5.33 -5.94 -0.87 -2.23 - - -6.59 -2.48 -3.84 -3.83 -6.76 -1.55 -5.55 -8.44 - -2.18 -3.37 -4.88 -5.75 -5.57 -6.97 -7.02 - - -5.48 -4.37 -5.05 -3.91 -4.23 -6.06 -4.39 -4.63 -3.77 -4.81 -2.93 -2.57 -3.52 -3.93 -7.08
-0.23 4.37 - 4.73 - - - - - - -0.01 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 2.79 - 3.59 -1.66 - 3.74 3.95 - - -2.44 - - -0.77 - - - - - - - - - -2.61 - - - - - - - - - - - - - - - - - - - - - - - - -
- 3.82 0.54 3.54 1.99 - 2.44 3.23 - - - - - - - - - - - - - -2.05 - - - - - - - - - - - - - - - - - - - - - - - 1.47 - - -
-0.84 1.48 1.02 4.05 0.65 -0.01 3.61 3.49 -0.75 -5.08 -2.83 - - - - - - -5.39 - -5.35 -6.32 - - - - - - - - - - - - - - - - - - -6.09 - - -5.37 -6.91 -3.05 - - - -
-2.7 2.89 - 3.87 4.29 -0.27 0.2 -2.67 -1.41 - -5.49 - 0.21 1.76 - - - - - - -3.02 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-6.44 0.84 -4.83 3.86 -0.47 -5.87 4.05 3.91 -3.97 -4.9 -6.35 - - -5.72 - - - -9.92 - -7.68 - -8.95 - - - -5.82 - - - -4.29 - -7.45 -5.29 - - - - - - - - - - -5.77 - - - - -
- 3.95 - 4.03 2.36 2.31 1.06 0.06 - - -1.56 - - 1.89 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 2.39 - 4.42 0.66 - 2.95 3.54 - - -4.48 - - - - - - -3.47 - -5.91 -1.94 - - - - - - - - - - - - - - - - - - -2.46 -1.39 - -1.44 - - - - - -
-0.01 3.59 -2.76 3.55 2.93 -1.07 -0.23 0.02 0.56 -0.86 0.28 -4.35 -0.54 -0.45 -1.56 -2.31 -0.8 -0.17 0.08 -1.59 -4.84 -5.22 -5.52 -5.03 -0.22 -0.89 0.38 -3.93 -5.4 -3.93 -4.02 -3.48 -4.34 -5.2 -5.18 -5.0 -4.0 -4.74 -5.01 -5.52 -5.11 -5.43 -4.31 -2.27 -1.81 -0.68 -0.57 -1.37 -1.66
-1.87 3.87 - 3.65 0.56 2.53 3.42 1.36 - -0.46 -1.66 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.24 1.36 - 4.26 2.27 -2.26 3.02 2.91 -0.43 -3.56 0.65 -2.98 -2.1 -1.88 - -1.72 -4.12 -4.77 0.41 -1.75 - - -6.42 - - -0.87 -2.24 - - - - - -2.1 - - - - - - -5.48 - - - -4.58 - -3.63 - - -
- 2.98 - 4.99 2.67 - 0.17 -0.82 - - - - - - - - - - - - - - - - - - - - - - - 0.48 - - - - - - - - - - - - - - - - -
-2.05 4.26 - 4.4 0.31 - 2.69 - - - -1.16 - - - - - - -1.64 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.83 3.76 0.1 4.42 2.2 - - - - - -5.33 - - 2.74 - - - 0.45 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.06 2.76 -1.85 4.49 1.96 -0.31 0.84 1.26 2.75 - -4.02 0.99 - - - - -3.81 -1.48 - - - - - - - - - - - - - -2.34 - - - - - - - - - - -2.17 -4.33 - -1.49 - - -
0.29 2.68 - 3.65 1.81 - 3.62 3.38 0.47 -1.04 -1.46 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -1.97 - - - -3.49 - - - - -
-4.69 2.68 -2.01 5.03 -0.49 2.4 -0.07 0.93 - -3.31 -5.69 - - -0.87 - - - -3.16 - - -4.84 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-5.73 -0.38 -8.11 4.11 -0.3 -3.94 3.89 3.91 -8.98 -5.2 -6.43 -8.48 -7.94 - - - -8.87 -8.82 - -10.89 - - - - - - - - - - - - - - - - - - - - - - - -7.62 - - - - -6.42
- 3.89 - 4.13 2.54 2.73 - -0.23 - - -0.72 - - - - - - - - -2.0 - - - -1.24 - - - - - - - 1.07 - - - - - - - - - - - - - - - - -
-1.73 3.41 - 4.3 2.63 - 0.98 2.67 - - -1.28 - - - - - - - - -4.74 - - - - - - - - - - - - - - - - - - - - - - - - 1.77 - - - -
-3.14 -0.62 -7.35 4.47 1.0 -1.76 3.27 3.8 -5.06 -6.26 -6.12 -6.02 - - - -5.73 - -7.84 - -7.2 -9.25 -9.43 -10.48 - -5.59 - - - - - - -8.82 - - - - - - - -9.44 -9.48 - - -4.31 -6.0 -5.53 - -5.03 -4.89
-2.85 2.42 - 3.99 0.15 - 2.95 4.05 - - -6.65 -3.15 - - - - - - - - -4.16 -5.11 - -1.99 - - - - - - - 0.37 - - - - - -1.18 - - - - - - - - - - -
-7.12 -0.39 -7.78 4.34 0.53 -2.55 3.58 3.83 -8.4 -5.1 -8.74 - - -10.33 - - -7.75 -12.32 - -9.48 - -12.63 - -10.91 -7.76 -9.05 - - - - - -9.87 - - - - - - - - -11.26 - -11.37 -6.55 -9.2 -8.03 -9.24 -7.12 -4.73
-6.42 -1.48 -10.41 4.44 1.35 -3.24 3.5 3.6 -7.75 -5.43 -3.24 -9.67 - -4.33 - - -9.86 -11.52 -0.67 -9.61 - - - -11.81 - -8.33 - - - - - - - - - - - - - - - - - -7.87 -8.29 -6.79 - -8.53 -8.43
-0.28 2.77 - 3.06 1.52 0.6 3.47 3.65 -1.59 - -2.32 - - -1.59 - - -1.34 -2.38 - - - -4.26 - -1.94 - -0.86 - - - - - -0.22 - - - - - - - - - -1.61 - -1.06 - 0.06 - - -
- 4.25 - 4.69 - - 2.06 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.21 3.97 - 4.1 1.67 0.95 1.68 1.2 0.36 - -0.23 - - - - - -2.77 - - - - - - - - - - - - - - - - - - - - - - - - - - - -0.26 1.09 - - -
-0.23 2.67 0.31 2.42 3.17 - 3.43 3.92 - - - - - - - - - - - -6.51 - - - -1.79 - - - - - - - - - - - - - - - - - - - - - - - - -
-0.29 4.02 - 3.45 3.12 - -0.41 3.05 - - - - - - - - - - - - - - - -0.59 - - - - - - - -0.11 - - - - - - - - - - - - - 0.74 - - -
-0.13 1.57 - 4.54 -0.64 - 3.21 3.58 - - -3.82 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.71 4.16 -0.73 4.44 2.6 - -0.94 -0.93 - - -4.25 - - - - - - -3.51 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.29 3.19 -4.09 3.53 1.36 1.59 2.28 2.91 0.46 -2.49 -1.65 - -1.05 -0.98 - - -0.45 -4.03 - -1.68 -6.16 - -5.25 - 1.71 - - -3.57 -4.85 -4.55 - -4.71 - - - - -4.88 -5.03 - -6.89 -4.97 -5.7 -5.21 -0.41 -1.37 -2.01 -3.62 - -4.61
-1.21 2.0 -3.6 2.85 2.41 1.62 3.09 2.9 -1.5 -0.61 -1.62 -0.48 -1.32 -1.26 - - -1.77 -3.36 - -3.84 -1.55 - -1.48 - - - - - - - - -1.35 -0.19 0.03 - - -1.52 -1.67 -0.03 -1.57 -1.51 -1.7 -1.25 -1.26 - - 1.23 -0.39 -
-4.09 2.14 0.31 4.26 2.54 - 2.78 2.94 - -1.08 -2.95 - - - - - - - - -0.47 - -4.25 - - - 0.58 - - - - - -1.16 - - - - - - - - - - - - - - -1.13 - -
0.17 2.91 - 4.18 2.86 0.71 -1.95 -0.27 - - -4.45 - 0.39 0.61 - - - -2.93 - -0.26 - - -2.45 - 1.55 - 0.12 - - - 0.99 - - - - - - - - -3.23 - - - -4.02 -0.03 -0.01 - - -
- 4.4 - 4.34 - - - - - - -1.86 - - 2.38 - - - - - -0.46 - - - - - - - - - - - - - - - - - - - - -1.49 - -0.51 -1.19 - - - - -
-4.67 3.06 - 5.09 -0.61 - - - - -3.35 -0.17 - -0.05 1.04 - - -0.4 0.0 - - - - -3.58 - - - - - - - - - - - - - - - - - - -16.02 - - - - - - -
- 4.22 - 4.49 2.99 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-4.17 2.55 -0.25 4.29 0.4 - 3.55 3.11 - -7.51 -9.53 - - -0.75 - - -5.86 -1.36 - - - - - - - - - -2.93 - - - -5.97 - - - - - - - - - - - - - - - - -
-4.61 -1.45 -6.02 4.22 1.16 -1.85 3.71 3.83 -9.51 -5.78 -9.7 - - - - - - -6.86 - -10.83 -12.81 -14.12 -12.89 -9.87 - -9.39 -10.3 - - - - -9.42 - - - - - -10.38 - -13.54 - -12.77 -11.79 -6.3 -9.51 -8.34 -8.47 -9.53 -
-3.05 2.62 -2.51 3.89 1.37 -0.25 3.16 3.91 - - -3.3 - - - - - - -2.7 - -4.92 - - - - - - - - - - - - - - - - - - - - - - - -3.04 - - - - -
0.52 3.39 -2.23 3.37 0.31 1.6 0.01 -0.05 0.61 -2.11 -0.98 0.19 -3.02 -0.68 1.34 - -1.93 -1.49 - 0.73 -5.92 -4.32 -3.88 -4.2 2.45 -2.2 -1.28 - - - -2.38 -1.7 -1.86 - - - - - - -5.9 -3.82 -4.85 -3.81 0.53 -1.34 -0.51 0.01 -0.99 -
0.39 3.78 -1.69 3.67 3.53 0.15 0.21 1.28 0.9 - -0.33 - - - - - - - - - - - - - - - - - - - - - - 0.67 - - - - - - - - -2.16 -2.64 - - - - -
-1.93 3.32 - 4.12 3.49 -0.33 1.14 0.86 - - -2.93 - - 2.32 - - - -3.84 - -3.96 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-6.46 -0.9 -8.62 4.24 0.84 -4.4 3.66 3.88 -7.43 -5.5 -8.27 -8.23 -6.06 -3.95 -7.91 - -10.06 -7.23 -5.18 -10.74 -9.54 -9.22 -8.59 -8.29 - -8.22 - -6.52 - -9.04 -7.94 -7.94 - - -8.7 -9.05 - - - -11.54 -12.58 - - -8.04 -5.17 -5.64 -3.45 - -
0.39 2.36 -4.53 3.06 -1.98 -3.83 3.59 4.11 -2.79 -2.7 -2.36 -1.35 -3.51 - - - -0.89 -3.83 - -1.15 -4.8 -5.15 -5.07 -3.2 - -1.73 - - - - - -0.93 - - - -2.53 - -2.73 - -6.24 -3.86 -3.43 -2.59 -1.95 -1.87 - -1.97 - -
-4.03 2.39 - 3.86 3.69 0.52 2.51 3.0 - -4.14 - - - - - - - - - - - - - - - - - - - - - 0.08 - - - - - - - - - - - - - - - - -
-3.39 2.94 - 3.77 3.4 0.67 -2.68 -1.09 1.69 - -4.22 - - - - - - - 3.39 - - - -3.01 -2.68 - - - - - - - -0.37 - - - - - - - - - - - - - - - - -
-1.61 3.36 - 3.39 3.13 0.34 2.77 3.25 -2.38 - -3.55 - - - - - - -4.09 - -7.33 - - - - - - - - - - - - - - - - - - - - - - - -3.45 0.14 - - - -
-2.03 0.09 0.65 4.04 0.65 -1.86 3.02 3.43 -0.5 -3.41 -0.44 -1.12 -1.56 -0.84 -3.59 -1.78 -1.87 -1.25 - -2.43 -2.88 -2.96 -2.64 -2.69 -4.46 -1.78 -1.76 -2.48 -4.22 -3.7 -3.84 -2.43 -2.84 -3.64 -3.3 -3.17 -4.63 -2.8 -1.76 -2.96 -2.49 -2.95 -2.64 -1.59 -1.18 -1.4 -2.54 -2.01 -
0.39 3.28 1.01 2.76 1.11 - 3.23 3.8 0.69 -1.82 -1.34 - - - - - - -3.78 - - - - - -2.58 - - - - - - - 0.31 - - - - - - - - - - - - - - - - -
-5.73 2.55 0.9 4.16 2.39 - 2.85 3.4 - - -2.54 - - - - - - -3.37 - - - - - -4.06 - - - - - - - -2.75 - - - - - - - - - - - - - - - - -
- 2.67 - 4.38 - 1.67 2.25 3.13 2.17 - -1.27 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -2.28 - - - - -
-3.54 0.1 -3.05 4.07 -2.89 - 3.76 3.71 -1.44 - -4.44 - - - - -1.03 0.31 -5.09 - -2.6 - - -5.45 -3.49 -0.98 - - - - - - - - - - - - - - - - - - -4.49 - -1.81 -0.24 - -
-0.06 3.26 - 3.58 1.27 2.5 2.44 2.79 -0.24 - -0.07 - - - 0.18 - -4.35 -1.31 - -3.97 -4.75 -4.46 -4.26 -3.06 - - - - - - - -1.9 - - - - - - - - - - - - -1.41 0.83 - - -
0.33 3.46 0.39 4.01 1.55 2.36 -0.8 -1.8 - -1.04 -0.38 -0.21 - 0.6 - - - - - -4.55 - - -2.69 - - - - - 1.99 - - - - - - - - - - - - - - -1.87 1.21 - - - -
-0.94 4.11 -3.23 4.02 -0.13 3.05 -0.03 -0.36 - -2.77 -1.0 - - 1.33 - - - - - - - - - - - - -0.47 - - - - - - - - - - - - - - - - - - - - - -
0.28 3.56 0.08 4.3 1.3 1.51 -2.17 -0.36 - - -1.01 - 1.24 1.45 - - 0.56 -1.29 - -2.33 - - - - - - - - - - - - - - - - - - - - - - -2.79 0.16 - - - - -
- 4.52 0.78 4.12 - 2.33 - - - - 0.63 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -1.35 - - - - -
-6.77 -0.94 -1.87 4.34 1.47 -1.12 3.03 4.04 -8.88 -6.09 -10.9 -10.19 -10.33 -10.34 - - - -10.75 - -10.46 -6.18 -10.79 -4.02 -8.26 - - - -7.01 -6.58 -9.09 -8.25 -8.92 -6.28 - - - -8.41 - - -12.73 -11.17 -11.18 -10.88 -7.4 - - - - -
0.28 3.69 - 3.87 1.27 2.53 1.94 2.41 - - - - - - - - 0.9 - - - - - - - - - - - - - - 0.08 - - - - - - - - - - - - - - - - -
-2.14 2.98 - 3.9 3.07 1.09 1.82 1.94 - -1.93 -2.74 - -0.04 -0.08 - - -2.52 -0.89 - -0.5 - - - - - - - - - - - - - - - - - - - - - - - 0.54 - -1.32 0.5 -0.07 -
-1.58 2.05 - 3.86 0.49 -0.91 3.23 3.62 -0.78 -5.11 -2.66 -1.23 -0.23 0.88 - - - -1.35 - 0.12 -3.51 -5.25 - -4.0 - - -1.81 - - - - - - - - - - - - -4.98 -4.34 - - -4.94 -1.86 -2.72 - - -
2.11 3.08 -1.64 3.64 1.57 1.89 -0.15 -0.4 - 0.83 1.1 - -0.8 -0.6 - - 0.13 -0.43 1.46 -0.55 - - -5.01 -3.14 - 0.62 -0.54 - - - - -2.3 - - - - - - - -2.87 -2.44 -4.01 -2.48 -2.48 -0.84 -2.03 - -1.88 -1.78

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.