Heatmap: Cluster_270 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
1.37 3.92 -0.12 -1.59 -1.11 0.88 -2.23 -1.43 -0.28 -3.17 -0.51 0.51 0.51 0.22 -1.53 -1.57 -0.25 -0.45 -3.23 0.68 -1.17 -1.19 -3.01 -1.52 -0.71 1.04 0.48 -0.53 -1.09 -1.28 -1.33 -0.01 -0.97 -2.08 -1.35 -1.13 -1.46 -0.69 -0.99 -0.97 -0.46 -0.58 0.01 -0.0 -0.25 -0.26 -1.95 -3.28 -3.31
1.34 4.14 -1.29 -0.65 -0.1 0.48 -1.96 -1.51 -0.88 -2.69 0.11 -1.74 0.32 3.06 -1.95 -1.06 -0.8 0.53 -2.37 0.58 -3.78 -4.13 -3.01 -4.14 -1.37 0.5 0.39 -5.0 -3.93 -3.48 -3.54 -3.39 -4.18 -3.7 -2.19 -5.25 -2.95 -3.57 -2.91 -4.03 -2.62 -4.25 -2.98 0.56 0.36 -1.27 -1.49 -2.46 -2.47
1.37 3.82 -1.8 -1.88 -0.72 1.35 -1.91 -0.91 -0.28 -2.63 -0.5 -1.83 2.05 1.66 -3.17 -1.69 0.62 0.64 0.09 0.88 -3.22 -4.19 -2.89 -2.79 -0.49 -0.11 -0.46 -2.97 -3.12 -2.68 -3.71 -2.02 -3.22 -3.55 -3.08 -3.1 -3.12 -2.46 -2.53 -3.8 -2.91 -2.73 -2.23 1.43 1.32 -0.2 -1.36 -1.52 -1.78
1.59 3.7 0.03 -0.87 -1.12 0.36 -0.81 -0.15 -1.3 -2.32 0.21 -2.52 2.53 2.47 -2.48 -1.66 1.41 0.3 -1.31 0.09 -2.48 -3.44 -2.47 -3.44 -1.56 -1.01 -0.93 -2.39 -2.96 -2.61 -2.88 -2.09 -2.42 -2.8 -2.77 -2.32 -2.63 -2.69 -2.88 -2.81 -2.36 -2.53 -2.04 0.26 -0.25 -0.46 -0.33 -0.97 -1.44
1.9 4.77 -1.77 -1.39 0.3 1.5 -4.11 -3.37 1.68 -4.94 -1.85 - -1.86 -2.49 - - -2.0 -1.6 - -0.17 -5.03 -5.46 -2.4 -3.02 -1.2 1.3 0.53 - - - - -4.39 - - - - - - - - -6.32 -5.1 -5.57 -1.88 0.26 0.38 - - -
0.43 3.71 -3.18 -0.87 -0.56 0.9 -2.67 -1.96 0.87 -3.15 -2.27 -3.57 0.4 3.59 -1.96 -1.67 -1.5 -0.96 0.28 -0.34 -2.53 -3.93 -2.78 -3.44 -0.86 -0.98 -1.97 -2.13 -3.33 -3.76 -2.79 -2.69 -2.84 -5.05 -6.24 -3.02 -3.78 -3.29 -4.27 -6.34 -4.88 -5.77 -5.45 -0.61 1.75 1.15 0.62 -0.22 -3.23
0.84 3.83 -1.22 0.25 1.18 2.47 -6.57 -2.72 -1.37 -3.54 -1.95 -1.78 -0.2 3.57 - -2.21 -1.56 -0.71 -0.5 -0.53 -2.29 -3.29 -2.51 -2.78 - -0.42 -0.54 -0.84 - - -1.04 -1.52 -2.3 - -2.02 -1.79 -3.23 - -1.44 -2.81 -2.3 -2.67 -1.17 -1.97 -0.91 -0.84 - -2.74 -
2.52 4.86 -1.7 -2.73 0.95 1.48 -0.05 -2.34 -2.62 - -0.69 - 1.3 0.51 - - 0.14 -0.54 - -4.42 - -4.68 - -3.93 - - - - - - - -1.04 - - - - - - - - - - - -0.79 - -1.78 - - -
0.46 4.77 - - - - - - - - - - - 4.35 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 5.12 - - - - - - 0.86 - -3.72 - - 3.58 - - - - - -4.27 - - - - - - - - - - - - - - - - - - - - - - - -1.24 - - - - -
-0.4 5.59 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-3.4 5.24 - - - 0.8 - - - - -2.3 - - - - - - - - -1.58 - - - - 2.7 - - - - - - - - - - - - - - - - - - - - - 1.3 - -
1.09 3.77 -2.58 -1.24 -1.25 1.92 -1.35 -1.12 -0.73 -3.12 -1.63 -3.36 0.5 3.23 -2.42 -1.77 -1.18 -0.75 2.12 -0.59 -3.23 -5.17 -3.09 -4.51 -2.26 -0.95 -1.3 -2.67 -2.41 -3.91 -4.63 -2.43 -4.08 -5.83 -3.74 -3.71 -3.92 -3.48 -4.4 -5.37 -4.36 -4.28 -3.89 -0.71 0.35 0.11 1.15 0.06 -2.53
2.22 5.12 - - - - - - - - -2.1 - - 2.43 - - 0.99 -0.79 - -0.89 - - - -2.21 - - - - - - - - - - - - - - - - -0.64 - - - - - - - -
1.24 4.36 -0.93 -2.78 -2.33 2.24 -1.75 -4.62 - -4.87 -2.58 -1.33 -2.74 -0.24 - -0.24 -0.41 -1.63 - -0.37 -3.8 -4.39 -5.1 -2.15 -0.13 2.38 2.46 - - - - -0.63 - - - -0.4 -1.29 - - - -4.03 -1.93 -2.85 -1.09 -1.66 -1.7 -0.85 - -
-2.47 4.95 - - - - - - - - - - - 4.16 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 4.9 - - - - - - - - - - - 4.18 - - - 0.08 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.56 4.39 -2.61 -0.65 -0.55 -0.97 -4.44 -1.32 -2.82 - -2.26 - 0.54 3.84 -1.06 -0.08 -1.21 -1.7 - -0.14 - - - -5.45 - 1.48 0.61 - - - - - - - - - - - - - - - - 0.26 -0.63 - - - -
1.33 4.78 -0.7 - - - - -0.9 - - -1.78 - - 4.13 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.57 4.38 0.12 0.45 1.66 2.1 -2.33 -3.32 -0.36 -3.57 -1.31 1.27 - 3.03 - - -3.55 -0.91 - -4.48 - - - - - -0.2 -0.26 - - - - -2.03 - - - - - - - - - - -2.65 -1.76 0.48 0.06 - - -
2.48 5.05 -1.02 - - - - - 1.51 1.01 0.48 - - - - - - -1.49 - -2.11 -3.0 - - -1.09 - 1.17 - - - - - - - - - - - - - - - - - - - - - - -
- 4.77 - - - - - - 0.85 - - - - 4.06 - - - - - - - - - - - - - - - - - 1.74 - - - - - - - - - - - - - - - - -
-0.09 4.8 - 1.28 -0.71 - -1.66 - - - -1.17 -0.07 - 3.42 - - -1.87 - - - - -1.86 - - - - - - - - - - - - - - - - - -1.66 -1.22 -1.19 -1.22 -2.35 1.31 - - - -
-1.43 4.82 - - - - -1.93 - - - -3.79 - - 4.18 - - -3.11 - - - - - - -1.93 - - 0.17 - - - - -1.62 - - - - - - - - - - - - - - - - -
- 4.68 - - - - - - - - - - - 4.43 - - - - - - - - - - - - - - - - - 0.86 - - - - - - - - - - - - - - - - -
- 5.07 - - - - - - -0.59 - - - - 3.2 - - -2.15 -0.75 - -1.3 - - - -1.9 - 1.23 - - - - - - - - - - - - - - - - - -2.97 - - - 0.68 -
-1.08 4.7 - - - - - - -0.07 - -2.76 - - 4.41 - - - - - - - - - -2.53 - - - - - - - - - - - - - - - - - - - - - - - - -
1.63 4.03 -0.73 0.34 2.14 2.17 -1.23 -1.39 -1.35 -6.11 -1.29 -1.63 -0.46 3.02 - -2.52 -1.85 -0.97 - -2.09 -2.23 -4.05 -3.9 -2.65 -1.47 -0.28 -0.64 - - -2.67 - -0.44 -3.41 -2.19 -1.74 -0.86 -2.16 -1.38 -3.84 -3.86 -1.85 -1.93 -2.25 -1.77 -1.94 -1.92 - -3.22 -
2.95 5.02 0.03 -1.11 - 1.09 - - -1.04 - -2.87 - - 1.48 - - - -3.38 - -2.08 - -1.17 - -0.7 - - - - - - - - - - - - - - - - -1.77 - - -2.34 - - - - -
- 4.65 - - - - - - - - - - - 2.59 - - - - - - - - - - 4.16 - - - - - - - - - - - - - - - - - - - - - - - -
- 5.02 - - - - - - - - - - - 2.67 - - - - - - - - - - - - - - - - - 3.35 - - - - - - - - - - - - - - - - -
0.04 4.44 - - - - - - - - -1.31 - 2.15 3.82 - - - - - - - -0.53 - -0.16 - - 1.29 - - - - - - - - - - - - - -1.06 - -1.27 - 1.27 - - - -
0.57 3.31 -0.74 -1.19 -0.37 2.38 -0.87 0.35 -0.18 -1.77 0.63 0.5 2.5 1.8 -0.29 -1.66 0.57 0.36 -1.76 -0.09 -2.72 -3.53 -3.83 -2.79 -1.84 -0.3 -2.2 -2.87 -2.79 -2.55 -3.89 -1.64 -4.14 -4.09 -2.06 -3.5 -1.67 -1.37 -2.3 -2.08 -2.19 -1.29 -0.98 0.83 0.09 0.76 -1.55 -3.56 -3.66
-0.65 3.88 -0.95 -0.49 0.35 -0.06 -1.81 -0.7 -2.78 - -1.21 - 1.58 3.19 -0.38 0.35 -1.96 -0.92 - -0.68 -2.57 -3.66 -1.94 -2.96 -1.55 -2.51 -1.7 - -1.18 - -0.25 -0.05 -1.7 - - -2.37 -1.87 - - -4.04 -2.54 -5.2 -2.1 -1.47 1.76 1.46 0.11 -1.88 -1.94
-0.38 5.09 - - - - - - - - 0.52 - - 3.16 - - - - - - - - - - - - - - - - - 1.63 - - - - - - - - - - - -0.75 - - - - -
-0.53 5.0 - - - - - - - - -2.81 - - 4.01 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.38 5.16 - - - - - - - - -2.47 - - 2.61 - - - - - - - - - - - - - - - - - 2.66 - - - - - - - - - - - - - - - - -
-2.59 4.7 - - - - - - 0.27 - -2.06 - - 4.02 - - - - - -0.77 - - - -1.0 - - 1.99 - - - - - - - - - - - - - - - - - - - - - -
-1.64 4.26 - - - - - - - -0.19 0.1 - - 3.99 - - - - - - - - - - 3.55 - - - - - - - - - - - - - - - - - - - - - - - -
2.53 5.35 - - - - - 0.0 - - - - - - - - 0.41 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
2.28 4.59 -1.25 - 0.54 2.68 - -2.44 0.91 -3.68 -1.27 - - -0.02 - - -2.63 -2.15 - -1.89 -4.18 -4.13 -2.36 -2.06 - - - - - - - -2.14 - 0.3 - -0.21 - -0.45 - -3.77 -1.71 -1.22 -0.53 -2.79 0.96 -1.29 - - -
-1.96 4.57 0.71 -0.47 - - 1.74 - - - - - - 4.16 - - - - - - - - - -1.32 - - - - - - - -0.02 - - - - - - - - - - - - - - - - -
2.38 4.23 -0.34 -1.07 1.91 2.86 -2.77 -1.46 -0.94 -2.42 -1.81 -3.73 -3.13 1.84 - - -5.56 -2.34 - -1.78 -2.32 -1.76 -4.16 -1.17 - -0.74 -2.29 -2.13 - - -2.05 -0.2 - - -1.8 - -2.22 0.06 -2.31 -4.73 -2.05 -2.01 -1.26 -1.23 - -2.35 - - -0.94
1.57 3.81 -4.34 2.34 -1.76 0.51 0.28 0.71 0.46 -0.93 -1.46 -3.15 1.59 0.97 - - 1.67 0.36 - 0.74 -3.33 -3.28 -3.41 -2.89 - 1.2 0.52 - - - - -1.96 - - - - -1.61 - - -4.1 -3.17 -3.83 -2.01 0.89 -1.71 -2.46 -2.74 -2.19 -0.22
0.85 3.87 -2.15 -1.0 -1.04 1.6 -2.52 -0.09 -3.84 -0.58 -0.48 -3.49 1.78 1.14 -0.72 -0.71 1.08 0.22 0.97 0.95 -5.2 -3.21 -3.35 -3.92 -0.69 1.2 0.78 - - - - -0.71 - - - - -1.97 - - -5.43 -4.39 - - 1.52 0.16 -0.19 -1.35 -2.52 -1.69
-0.97 4.22 -1.47 1.35 - - - - - -2.57 -2.09 - - 4.41 - - - - - - - - -2.12 - 2.08 - - - - - - -1.02 - - - - - - - - - - -1.65 - - - - - -
-0.78 4.55 1.45 - - - 2.22 0.91 - - - - - 3.94 - - - - - - -1.05 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.87 4.22 -1.35 -1.3 1.17 2.59 -1.15 0.95 -2.16 -2.13 0.05 -0.11 0.6 1.4 - - -0.2 -2.85 - -0.57 - - - -3.48 - - - - - - - -0.59 - - - - - - - - - -3.0 - 0.29 0.54 0.33 1.12 - -
1.7 3.94 - -3.53 - - 0.13 0.78 -2.89 -0.45 -0.54 -2.72 -0.4 -0.2 2.99 1.0 0.82 0.78 - 0.24 -3.78 -2.66 -4.98 -4.87 - 0.97 1.68 - - - - - - - - - - - - - - - - -1.18 0.78 -1.04 - -0.79 -0.23
2.67 4.98 -1.48 -0.83 1.18 - -1.69 - 1.58 - -3.25 - - 0.52 - - -1.87 -2.89 - -1.46 - -2.2 -2.09 -1.69 - - - - - - - 0.62 - - - - - - - - - - - - - - - - -
-3.77 4.78 -0.89 - - 1.68 - - 0.61 - -4.89 -0.31 1.22 3.37 - - 0.41 -0.02 - - - - -1.21 - - - - - - - - - - - - - - - - - - - - - - - - - -
- 4.73 0.47 - - - - - - - - - - 4.4 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.82 4.7 - - - 0.84 - - 0.85 - - - - 3.86 - - - - - - - - - - - 1.36 - - - - - 0.54 - - - - - - - - - - -0.97 - - - - - -
- 4.2 - 0.97 1.47 - - -0.77 - - 0.2 - - 3.84 - - -0.03 - - - - - - - - - - - - - - 0.46 - - - - - - - - - - - - - - 2.91 - -
-1.25 5.35 -0.12 - -2.83 - - - - - -3.5 - - 2.66 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -2.25 - - - - -
-0.0 5.55 - - - - - 0.11 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.43 4.68 - - - - 0.07 - - - - - - 4.23 - - - -1.45 - - - - - - - - - - - - - - - - - - - - - - - - - -1.01 - - - - -
-2.62 5.09 - - - - - - - - -1.62 - - 3.85 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 5.07 - - - - - - - - - - - 3.87 - - - - - - - - - -0.58 - - - - - - - - - - - - - - - - - - - - - - - - -
-0.07 4.35 - 1.77 1.89 - -0.43 - - - - - - 4.26 - - -0.67 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.43 4.18 - 1.75 2.64 - 2.23 -0.82 - - -4.15 - - 3.7 - - - - - - - - - - - - - - - - - 1.48 - - - - - - - - - - - - - - - - -
2.18 4.39 0.31 -0.11 0.4 1.93 -0.61 -0.66 -3.97 -2.86 -0.39 -1.91 -0.74 0.9 -2.02 -1.96 0.23 0.73 - -0.28 -4.03 -7.11 -2.38 -4.95 -0.33 0.92 -1.27 - -3.19 - - -3.46 -2.09 - -2.06 -3.16 -3.02 -3.36 - -3.93 -3.45 -4.71 -3.35 0.34 -1.14 - -1.33 -2.77 -2.53
- 5.15 - - - - - - - - - - - 3.66 - - - - - -3.48 - -0.35 - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 5.61 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.68 5.52 - - - - - - 0.4 - - - - 0.83 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.1 5.54 - - - - - - - - -2.42 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.