Heatmap: Cluster_133 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
-3.11 0.78 - - - - - - -3.54 - -3.18 2.86 - -1.11 0.2 - - -5.83 - -6.49 -7.4 - -5.18 -3.88 - -2.42 - -3.01 - - - -2.57 -2.99 - - - - - - - - -5.5 - -1.07 3.59 4.63 - -3.72 -
-0.01 0.55 -0.83 - - - 0.79 1.46 3.46 -5.8 -1.02 -0.22 1.31 2.96 -4.59 -4.56 0.07 0.9 0.32 -4.52 -4.98 -3.75 -4.5 -3.32 -2.84 - -3.87 -3.89 - -4.13 -5.98 - -5.46 - - -5.73 -4.79 -3.34 - -5.53 -5.19 -4.08 -4.26 -2.76 0.29 3.59 -4.53 -6.19 -2.93
3.45 4.42 - - - - - - - - -1.4 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.34 - 3.91 - - -
-0.65 3.28 0.41 -0.79 0.54 1.71 - - 0.36 -2.22 -1.91 -2.97 - -0.19 - - -1.47 -2.21 - -1.6 -1.27 -2.49 -0.73 1.15 - 1.58 0.31 - - -0.99 -1.73 0.66 -1.69 - - -0.91 0.15 -0.97 - -2.09 -1.89 0.19 0.65 -0.32 1.4 3.08 -0.42 - -
- 3.95 - - - - - - - - -2.27 1.55 2.12 - - - - -1.42 - - - - - - - - - - - - - - - - - - - - - - - - - - 2.81 4.22 - - -
-1.05 3.97 0.03 0.46 1.48 1.23 - - - - -2.16 -0.33 - - - - - - - -0.06 - - - -2.11 - - 0.96 - - - - 0.73 - - - - - - 0.94 - -1.63 - - 0.65 2.07 3.52 - - -
-1.18 3.87 -1.66 - - -1.09 -1.87 - 0.72 - -1.63 -0.9 - 0.39 - - -3.72 -1.13 - 1.77 -3.91 -4.01 -3.63 -1.89 - 2.13 - - - - - -0.07 - - - - - - - - -4.1 - - -1.4 2.17 3.84 - - -
0.37 1.7 -0.85 - - - - - - - -1.15 -0.05 - 0.04 - - - -1.69 - - -3.65 - -1.27 -2.36 - - - - - - 0.48 - - - 2.24 - - 0.92 0.22 - -2.95 -1.22 - -2.51 3.78 4.07 - - -
-4.5 1.78 - - - - -2.76 - -1.35 -2.99 -5.02 -1.14 -0.87 - - - - -1.0 - - - - - - - - - - - - - - - - - - - - - - - - - -2.44 2.95 5.14 - - -
-2.64 2.43 - - - - - - -0.34 - - -1.11 -0.08 - - - - - - - - - -2.18 - - - - - - 1.17 - - - - - - - - - -2.16 -0.8 -0.96 0.45 1.45 2.08 4.37 2.24 1.11 0.69
-6.6 -1.73 - - -5.85 -4.4 -5.09 -2.5 0.12 -6.18 -1.44 0.87 0.93 1.16 - - -1.66 0.6 -0.5 -9.09 -1.89 -6.47 -1.13 -6.84 - - - -1.21 -3.99 -3.36 -4.86 -3.32 -1.48 - -3.86 -3.38 -1.92 -1.61 -3.11 -8.35 -6.57 -6.43 -6.41 -7.84 2.13 4.22 2.57 2.7 -1.68
-5.68 -2.24 - - - 0.41 -2.4 -1.94 0.09 -5.81 -3.24 1.36 -1.6 -1.28 0.62 0.95 -3.53 0.91 0.59 -0.46 -2.15 1.1 0.68 -0.08 - -1.41 -2.0 -1.89 -3.27 -2.72 -3.41 -2.9 -4.8 -3.38 -2.93 -1.04 -2.93 -2.33 -3.44 -3.73 -3.6 -2.49 -2.09 -0.43 1.14 3.44 -1.35 1.69 3.22
-0.66 1.87 - - - 0.91 - - - - -3.68 1.32 - -1.14 - - - - - -1.07 - - - - - - - - - - - -1.67 - - - - - - - - - - - -0.86 1.04 3.71 4.43 0.86 -
-9.89 -5.22 - - - -17.04 - - - - -3.95 -4.09 - -26.02 - - - -7.16 - - - - - -31.04 -4.79 - - - - - - - - - - - - - - -26.85 - - - -4.06 0.07 3.89 4.39 3.55 -2.51
-1.06 3.17 -1.42 - -1.84 - -4.14 - -1.73 - -3.61 -2.55 0.09 2.72 - - -1.7 -5.31 - -5.36 - - - -2.33 - - - - - - - -0.03 - - - - - -1.15 - - - - - 0.59 3.33 3.82 1.08 -0.31 -
1.21 4.28 - - - - - - - - -1.85 - - - - - 0.3 - - -1.83 - - - - - - - - - - - - - - - - - - - - - - 1.22 - 2.91 3.97 - - -
-1.33 3.72 - - - - -1.61 - -0.46 - - 1.49 - - - - - -3.89 - 1.01 -1.85 - -0.78 -1.61 - - - - - - - 0.69 - - - 1.58 - - - - - - - 2.45 1.4 3.96 - - -
-1.5 -0.46 -5.79 -6.24 - - 0.08 0.58 1.0 -5.77 -2.96 -0.03 2.07 1.59 -0.95 -0.74 -0.31 0.6 - -0.58 -1.19 -0.4 -1.15 -0.63 - -0.43 -2.28 -0.49 -1.4 -1.28 -1.96 -0.23 -1.05 -4.37 -1.65 -1.0 -1.33 -2.06 -0.89 -2.14 -1.89 -1.4 -2.31 1.53 0.52 2.47 -0.97 0.8 3.22
- 2.9 - - -0.7 - - - - - -2.95 - 0.7 0.85 1.4 - - -1.79 - -1.53 - - -3.89 -3.01 - - - - - - - - - - - - - - - - -2.66 - - 1.51 3.66 4.01 1.11 - -
- 2.58 - - - - - - - - -2.42 - - - - - - -0.52 - - - - - - 4.06 - - - - - - - - - - - - - - - - - - 2.23 2.21 3.83 0.96 - -
-2.36 3.17 - - - 0.19 - - -0.55 -1.94 -2.77 - - - - - - 0.92 - -5.47 - -0.47 - - 3.71 - - - - - - - - - - - - - - - - - - 2.99 - 3.0 2.56 - -
-5.1 -0.89 - - -2.94 - -6.27 -5.67 -1.4 -5.18 -5.83 - -5.38 -3.71 - - -5.18 -3.37 - -5.34 - - - -7.48 - -4.33 - - - - - - - - - - - - - - - -6.22 - 4.76 1.0 4.21 - - -
-1.64 -0.29 -0.18 1.28 -0.68 -0.55 -0.2 -0.68 -2.56 -3.21 -0.45 -2.45 -2.54 -1.08 -1.97 -0.54 -1.06 -2.04 -1.87 -3.29 0.86 -1.96 -1.27 -1.96 -1.21 - -3.32 1.14 -0.14 1.41 0.42 0.97 0.31 -0.08 0.92 1.34 0.87 1.01 0.51 -1.01 -0.9 -0.94 -0.62 -1.23 2.23 2.65 - -3.72 -
-2.18 3.68 - - - - - - 2.71 - - - - - - - -0.28 - - - - - - - - - - - - - - 0.92 - - - - - - - - - -1.51 - -2.5 - 4.71 - - -
-0.15 1.54 - -1.9 2.83 3.07 -3.76 -2.75 -0.86 - - -2.11 - - - - - - 2.31 -1.89 - - - - - - - - - - - - - - - - - - - - - - - -4.45 3.14 3.84 - - -
-0.96 3.89 -1.1 -1.61 1.96 - - - - - -4.46 -0.85 - -0.78 - - - - - -4.76 - - - -2.62 - - - - - - - -1.31 - - - - - - - - - - - 2.73 4.23 0.88 - - -
-3.86 -0.73 -8.83 - -4.81 -8.18 -2.11 -2.28 -0.06 -3.83 -0.77 1.79 1.73 1.08 -2.35 -2.16 -2.0 -0.6 2.12 -2.95 -1.32 -2.22 -2.06 -1.67 -1.52 -5.36 -3.82 -1.52 -1.35 -1.58 -1.01 0.34 -2.54 -3.16 -3.0 -2.54 -2.32 -1.78 -2.68 -4.49 -4.37 -2.54 -3.2 1.32 2.4 3.13 2.66 0.82 -0.18
-3.19 2.33 - - - - 2.0 1.99 2.39 -2.3 -2.39 -0.52 -1.02 0.63 - - 0.52 1.19 3.49 -9.21 -5.33 -6.39 -5.51 -7.26 -4.24 - -5.58 -3.62 - -3.86 -5.35 -4.7 - - - - - - - -9.15 - - - -1.14 0.74 2.21 2.19 -0.45 -2.12
- 0.11 - - - - - - -0.97 - -3.84 1.81 - - 1.33 1.17 - 0.63 - 0.78 -0.67 -4.12 -3.28 -3.75 - -3.07 -2.98 -2.79 -2.22 -2.8 - -1.9 -2.74 - - -1.8 -1.88 -0.51 -2.97 -1.14 -1.97 0.14 0.58 - 2.99 4.39 -3.08 -3.43 -
-0.09 2.02 - -2.38 - -0.95 -0.52 -2.83 0.85 - -1.31 - - - - - - 0.57 - -4.39 -1.72 -1.82 -1.86 -0.49 - - - - - - - - - - - - - - - - - - - 1.28 3.47 3.66 2.91 - 1.8
-2.42 4.28 -17.19 -11.07 - - - - -1.42 - -2.71 -0.25 - 0.46 - - - -1.67 - -0.58 -2.93 -2.37 -6.54 -0.38 - 0.26 - - - -2.9 - 1.46 - - - - - - - -3.05 -3.05 -0.95 -2.14 -0.98 3.05 3.43 - - -
-1.56 1.63 -3.24 - - - -3.45 -3.44 - -3.69 -0.64 - - -0.24 2.47 0.95 -2.08 -0.38 - -4.39 -3.86 - -4.05 - - 0.65 - - - -0.24 -0.15 -2.14 - - - - - - - - - - - -0.06 3.68 3.09 3.1 -0.72 -
0.4 2.39 - - - 0.93 - - 1.67 - -2.01 0.68 - - - - - -2.71 - - -1.49 - - -1.32 - - - - - - - 1.6 - - - - - - - - - -0.17 -1.4 - 3.23 4.38 - - -
-0.38 2.59 -1.8 - - - -1.71 -4.28 0.27 - -1.76 -0.22 1.45 -0.61 - - - -1.24 - 1.75 -4.88 -5.14 -3.57 - 1.77 - - - - -1.08 - -1.98 - -0.55 - - - -0.3 - - - - - -0.74 2.74 4.21 -1.18 - -
0.98 4.05 - -0.91 - 0.1 - - 1.6 - -6.74 - - - - - -0.98 -3.83 - - -0.69 -2.36 -3.79 -2.79 - - - - - - 0.16 1.52 - 0.95 - - 0.55 - - 0.23 0.77 1.27 0.97 - -0.19 3.13 - - -
-2.82 2.38 -3.18 - -0.37 -2.05 - - -0.05 - -0.23 2.17 - 1.9 - - -1.11 -5.66 3.2 - -4.8 -0.85 -3.46 -0.19 - - -1.39 - - - -1.51 -1.56 - -0.83 - -1.26 - - - -3.66 -1.57 -4.17 -2.32 -1.68 2.88 3.44 - - -
-3.77 -0.49 - - - -2.07 - - - - -2.2 2.57 - - 1.29 1.3 - -4.09 - -2.97 - -4.88 - -3.69 - -1.55 - - - - - -2.38 - - - - - - - - - - - - 3.03 4.8 - - -
-1.4 4.21 - - -2.26 - - - -0.6 - -1.4 1.96 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.91 4.4 - - -
0.43 2.52 1.32 - - - -0.09 -1.87 0.5 -1.49 -0.65 -0.1 -1.09 - - - 0.53 -0.76 3.61 -0.65 -4.05 -4.07 - - 1.04 -0.53 - - - - - - - - - - - - - -3.98 - -2.5 - -4.53 0.45 3.29 -0.35 -0.73 1.95
- -0.93 - - - - - -6.32 - -4.08 -4.47 - -2.18 -1.84 -1.95 - -3.32 -4.19 0.74 -1.42 - - -5.8 - - - - - - - - -3.03 - - - - - - - -3.91 -7.04 - -5.81 2.01 3.18 3.91 3.58 1.95 0.3
-6.23 -0.41 -3.87 - -7.08 -5.8 -0.42 -0.79 -2.14 -2.67 -0.61 -6.62 0.07 0.26 -1.35 -2.33 -7.94 0.53 -1.62 0.5 -3.81 -2.21 -4.02 -2.14 - 0.75 1.34 -4.47 - - - - -4.43 -3.95 - -2.47 -4.36 -4.7 -2.44 -6.47 -5.32 - -6.14 4.02 2.7 2.51 1.17 1.22 0.42
0.0 -0.19 -1.98 -0.93 1.98 -0.08 -3.63 -2.73 -0.25 -2.45 0.47 -0.46 -3.48 0.16 2.96 3.43 -3.52 -1.6 - -1.79 -4.79 -4.8 -4.82 -3.97 - -0.55 -0.14 - - - -4.35 -4.35 -4.39 -2.67 - - -3.52 - -3.91 -4.97 -5.11 -4.57 -4.06 -3.67 2.96 2.87 - - -
- 3.49 -1.25 - - - - - - - -0.99 - - - - - - - - - -0.33 -2.22 -1.2 - - - - - - - - 1.22 2.82 2.1 - - - - - -1.89 -0.74 -0.34 -0.16 - 4.26 -8.11 - - -
- 1.68 -2.36 - - - - - - - - - - - - - - - - -0.54 - - - - - 1.67 - - - - - - - - - - - - - - - - - - 4.1 4.62 - - -
-2.9 1.8 -1.84 - - - - - -1.43 - -6.17 - - - - 0.54 - -4.09 - -0.39 - - - - - 1.67 -0.79 - - - - - - - - - - - - - - - - - 3.91 4.57 - - -
-4.7 -2.77 - -7.11 - - 0.79 1.49 -6.1 - -3.0 -3.44 1.95 2.43 - - 1.12 0.78 - - -6.03 -4.87 -5.4 -8.26 - - - - - - - -6.26 -4.3 - - -1.79 - - - - - - - 2.24 -0.17 4.63 -4.64 - -
-0.06 4.03 - -0.58 - - - - -0.17 - - - - - - - 0.4 - - - - - - - - 3.04 - - - - - - - - - - - - - - - - - - 4.1 1.79 - - -
-7.65 -3.86 - - - - - - - -4.06 -3.64 3.08 -1.01 0.9 -1.65 - -6.24 -2.09 - -2.63 -4.17 - -5.97 - - - -2.02 - - - - - - - - -2.84 - - - - - -5.75 - -1.92 3.19 4.77 - - -
-4.09 0.56 -6.69 - - -4.29 -1.7 -1.62 -3.5 - -5.33 -2.53 -1.36 -2.67 - - -4.01 -0.47 - -3.35 - -5.7 -6.23 - -2.49 - -2.87 - - - - -5.59 -2.43 - - - - - - -7.07 - - -4.01 3.23 2.84 4.67 1.09 -2.06 -4.07
-4.31 -0.94 -4.55 - - - 2.1 2.63 -4.81 -0.85 -2.39 -0.46 -0.54 -2.36 - - -3.59 -1.71 - -1.0 - - - - -2.52 -6.07 - - - - - - - - - - - - - - - - - 2.43 3.1 4.33 -1.94 -3.86 -
-2.5 -0.47 -4.11 -6.69 - -5.66 -1.48 -0.79 3.19 -3.26 -2.49 -0.4 -0.39 0.96 -0.38 0.29 -0.61 1.52 - -1.11 -0.81 -0.26 -1.43 -0.25 -2.1 -1.97 -1.7 -0.87 -1.56 -1.63 -2.13 -0.92 -1.18 -0.55 -0.78 -0.26 -3.42 -0.33 0.15 -0.18 -0.82 0.04 -0.1 -0.73 -0.9 3.25 0.78 1.16 -1.73
-0.84 3.01 -2.19 - 2.72 - 0.05 -2.45 -1.77 -2.11 -3.6 - - -0.03 - - -0.33 -2.5 - -1.05 -1.25 - - -2.11 - - - -0.23 - - - -0.56 - - - - - 0.29 - -2.14 -0.6 - 0.11 -0.25 3.12 3.85 - - -
- 3.76 -5.12 - -1.2 - - -23.27 -9.7 - -29.98 1.07 - - - - - -3.44 - 0.26 -2.87 -0.46 -3.34 -1.96 1.89 1.58 - 2.2 - -2.83 - 1.67 - - - - - - - - -0.53 - - - 0.35 3.79 - - -
- -1.61 - - - -1.41 - -2.92 -2.92 - -2.48 - - - - - - - - - - - - -3.61 - - - - - - - -0.72 - - - - - - - -5.71 -6.11 -5.01 -5.08 -5.06 2.93 5.25 -1.85 -0.22 -1.78
-0.54 4.12 - - - - - - 2.24 - -3.21 - - - - - -0.85 -1.43 - - - - -2.56 -2.42 - - 1.04 - - - - 0.89 - - - - - - - - -2.73 - - - 3.77 2.36 - 0.96 -
-7.19 -2.52 -7.4 - -5.23 - - - -7.27 - -4.28 1.3 - -6.38 - - -5.39 - - - - - - -9.59 - - - - - - - -8.28 - - - - - - - - - - - -1.35 1.84 5.15 1.02 0.55 1.67
-2.52 3.22 - - - -0.29 - -2.89 - - - - - -0.06 - - -0.7 1.24 - -0.2 - - - - 1.51 - - - - - - - - - - - - - - - - - - 2.27 2.25 4.42 - - -
0.2 3.78 -1.17 -2.93 -3.72 0.69 0.11 -0.32 0.69 0.08 1.02 - 0.59 0.73 - - 2.25 -0.05 - -0.8 -3.6 - -2.43 -2.65 1.02 - - - - - - -2.47 - - - -0.58 - - - -5.1 -3.92 -2.72 -4.24 -0.31 3.04 -1.56 -1.03 0.4 -0.02
- 3.33 -6.04 - - - - -0.25 -10.42 - -4.69 - - - - - -2.82 - - -5.33 -1.72 -4.53 -5.31 -3.7 - - - - - -3.75 - - - - - - - - - -19.06 - -22.57 - - 4.06 4.37 - - -
-3.15 1.58 - - - - - - - - -3.73 - - - - - 0.78 - - - - - - -0.42 - - - - - - - -0.11 - - - - - - - - - - - 4.2 2.76 4.11 - - -
-7.71 -0.72 -4.7 - -4.78 -2.67 -7.62 - -1.02 -6.27 -3.9 -2.93 - -2.64 - - -1.94 -2.98 4.62 -11.39 - - - -3.81 - - - - - - - -3.31 - - - - - -3.88 - - - -6.02 -6.73 3.11 2.29 3.09 - - -
-4.5 1.37 -2.08 -3.64 0.95 - - - - - - -3.36 - -2.18 1.84 2.71 -0.14 -0.86 - 1.08 - - - - - 1.69 2.09 - - - - - - - - - - - - - - - - - 3.12 3.8 - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.