Heatmap: Cluster_46 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
1.82 1.98 -1.87 0.2 -2.09 3.3 -2.19 -1.39 4.47 0.45 -0.01 - - -1.94 - - -0.42 -1.2 - -4.62 -5.14 -5.59 -5.0 - - - - - - - - - - - - - - - - -4.89 - - - -2.91 - - -0.76 1.09 -1.37
0.9 0.73 - - - - -2.48 -1.69 2.96 -4.31 -0.69 - -0.09 -0.16 - - -3.71 -2.8 - 0.62 -5.47 - -5.05 - - 0.2 0.0 - - - - - - - - - - - - -5.23 -4.59 - - 3.96 2.21 0.52 3.09 - -0.92
2.73 4.29 - - - 4.51 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
2.07 -0.85 0.36 -5.98 -5.3 -1.45 0.27 -0.25 3.67 -0.14 1.38 -4.96 -1.0 -0.45 -1.75 -1.59 1.19 -0.88 1.86 -0.76 -2.93 -2.97 -4.17 -2.92 -1.37 -1.12 -0.34 -2.96 -3.98 -3.43 -2.99 -3.01 -4.25 -3.5 -3.93 -2.46 -3.82 -3.99 -2.52 -3.87 -2.88 -3.01 -2.13 -0.76 -0.26 0.36 0.57 1.67 2.02
2.39 2.96 1.65 - - 3.38 1.46 1.88 2.34 0.11 -0.72 - - -0.03 - - 0.95 - - - -2.6 - -2.84 - - - - - - - - 1.03 - - - - 1.47 - - - -0.18 - -1.48 - - - - - -
3.9 3.68 - -0.48 - - -2.44 -2.44 4.08 - -4.26 - - - - - - - - - - - - - - - - - - - - -1.14 - - - - - - - -2.31 - - - -2.13 - 0.06 - 0.29 -
3.1 3.65 - -1.07 1.3 1.12 - -3.17 3.75 -1.41 0.97 -0.8 -0.28 1.51 - - -2.76 -3.12 - -1.94 - - - -2.07 - - - - - - - -1.87 - 0.46 - - - - - -3.7 -3.27 - - -4.24 - - - - -
1.53 3.12 -2.41 -3.47 - -0.08 0.16 0.59 3.97 -0.59 0.07 - -0.94 -0.14 - - 0.77 0.03 -1.05 -2.56 -4.75 -7.73 -5.61 -6.13 -0.37 - - - - - - -2.77 - - - - - -3.38 - - -7.66 -6.53 -6.65 -0.95 -4.54 - 1.58 2.01 1.38
3.34 2.35 -1.16 -0.66 -0.23 -0.41 0.58 0.45 4.5 -4.58 -0.97 - -4.33 -4.71 - - 1.12 -1.94 - -3.07 -2.24 -3.48 - -7.32 0.28 - - - - - -3.25 -5.24 -3.28 - - -3.31 - -2.56 - - - - - -2.43 -2.69 -3.17 - - -
2.71 3.62 - -1.01 -1.94 - -2.89 1.45 3.94 - -1.46 - - - - - 0.15 -1.9 - - -2.94 - -2.41 -2.23 - 1.82 - - - - - 1.58 - - - 0.3 - - - -0.48 - -1.14 - - - - - - -
3.03 3.95 - -0.89 -0.47 0.84 -2.72 -2.77 3.96 - -1.44 -1.0 -0.55 - - - - - - -3.52 - - - -1.67 - 0.36 - - - - - - - - - - - - - -1.3 -3.47 - - -2.64 0.02 0.61 - - -
5.26 3.21 - -2.45 - - - - - - -5.89 - - - - - - -0.24 - - - -2.03 - - - - - - - - - - - - - - - - - - - - - - - - - - -
2.51 3.15 -1.34 -3.59 0.85 1.35 -2.05 -3.45 3.78 - -0.98 0.99 - -1.26 - - -4.71 -2.62 - -0.63 -2.75 -3.36 -2.37 -1.49 0.99 -1.34 -1.37 - -0.68 -1.01 -1.17 -1.41 - - - - - - - -2.14 -3.2 -1.82 -3.92 -0.46 2.12 -2.32 - -1.89 -
2.63 3.18 2.1 - - 2.08 -0.75 -1.0 4.32 - -0.01 -0.2 - - - - -1.34 -5.59 - - - -1.56 -3.49 -0.84 - - - - - - - -0.28 - - - - - - - -3.47 - - - - - - - - -
2.91 4.39 - - - - - - - 2.64 3.77 - - - - - - - - -0.85 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
2.72 - - - - 5.39 - - - - -1.02 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
2.67 3.54 - 0.68 2.09 2.39 - - 3.61 - 1.06 0.41 1.52 - - - - -0.41 - - - - - - - - - - - - - - - - - - - - - - - - -0.56 - - - - - -
3.22 3.74 - - - - - - 4.27 - - - - - - - - 0.05 - -0.86 - - - - - 2.28 - - - - - - - - - - - - - - - - - -0.92 - - - - -
2.68 3.07 - -3.14 -3.2 - - - 4.42 - -2.42 - - -2.31 - - -4.36 -4.67 - -3.51 -4.16 - -3.62 - 3.44 - - - - - - -1.84 - - - - - - - -3.09 - - - -4.22 - - -1.04 - -
3.16 3.82 -2.36 2.74 -3.89 -0.72 1.24 0.16 1.09 1.2 0.19 -4.69 -3.06 -0.5 -28.39 - -5.26 -3.04 - -3.56 -5.66 -5.26 -5.95 -2.16 -1.93 -3.26 - - -28.37 - -4.43 -3.98 - -3.64 -0.64 -28.41 0.67 0.22 -0.25 -7.57 -6.44 -7.1 -32.29 -2.17 0.38 0.21 -2.44 -18.41 -1.56
1.11 1.21 -0.27 0.56 0.26 4.41 -5.43 -2.75 4.26 -5.67 -2.86 - - - - - - -4.6 - -7.61 - - - - - - - - - - - - - - - - - - - - - - - -3.36 - -2.44 - - -
2.16 3.62 - - - - - -2.53 3.83 - -3.83 - - - - - - -1.7 3.54 - - -2.73 - -1.54 - - - - - - - -0.23 - - - - - - - -0.33 -1.37 - - - - - 0.57 - 0.88
2.92 3.67 - - - 0.2 - -2.67 4.61 -2.92 -3.15 -0.21 - - - - -1.29 - - - - -2.95 - -0.98 - - - - - - - -1.37 - - - - - - - -1.23 -3.38 - - - - - - - -
2.22 3.08 - - - -0.85 -2.26 - 3.94 - -3.86 -0.63 -0.37 0.5 1.13 - - -2.69 - -0.26 - - - -1.81 3.02 - - - - -0.05 - - - - - -0.02 - - - -2.6 -3.39 -2.82 -2.68 -2.6 -0.34 0.91 - - -
3.16 3.18 1.01 - - 0.9 - - 4.73 - -3.94 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -1.12 - - - - - - - -
2.17 4.55 -0.32 - - - - -1.02 3.61 - 0.97 - - - - - - - - - - - -1.14 - - - - 2.19 - - - - - - - - - - - -1.35 - - - -2.1 - - - - -
2.69 4.49 - - - - -0.96 - 4.24 - -1.34 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -1.62 - - - - - - - - -
2.39 3.56 - - - 1.73 -0.87 - 4.78 - -0.93 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
3.2 3.68 - - -0.34 - - - 4.66 - -2.65 - - - - - - - - -4.67 - - - - - - - - - - - - - - - - - - - -0.42 - - - - - - - - -
2.31 - - - - - 0.91 - - - - - - - - - - -1.67 - - 0.96 - - - 5.32 - - - - - - - - - - - - - - - - - - - - - - - -
1.25 4.4 - - - - -0.42 - 4.63 - -3.74 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
2.98 3.46 -0.79 -0.52 -1.64 -1.16 -0.37 -2.12 2.62 -1.84 -1.24 -3.33 -1.6 0.39 -0.6 - - -2.37 2.13 -1.76 -2.54 -3.28 -2.46 -1.63 - - - - 0.05 - - -1.63 - - -1.32 0.1 -1.05 -1.53 - -2.83 -3.05 -4.47 -4.19 -1.03 2.56 -0.22 - -0.19 -
2.53 2.9 -1.84 - - 2.48 - -1.52 4.07 -1.77 -1.29 - - - - - -1.7 -3.78 - -5.29 -2.84 -3.67 - 2.78 - - - - - - - -1.81 - - - - - - - -3.61 -2.46 -0.43 - -2.43 -0.14 1.16 - - -
3.18 2.76 3.03 3.42 -0.83 - -2.44 -0.85 3.07 - -0.14 - - - - - - -1.83 - -0.67 - - - - - - - - - - - - - - - - - - - - - - - -1.93 - - - 0.29 0.39
3.77 2.85 0.42 - - - - -1.28 3.93 - -4.57 0.79 0.93 0.55 - - - 0.03 - - - - 0.03 - - - - - - - - - - - - - - - - -0.62 -1.81 - - - - - 1.64 - -
1.2 4.27 - - - - - - 4.53 - - - - 1.22 - - - -0.76 - - - -1.33 -0.95 - - - - - - - - - - - - - - - - - -1.25 - - - - - - - -
0.38 2.82 - - - -1.63 - - -1.88 - -4.25 -3.43 - -0.57 - - - -5.24 - -5.45 0.69 - 0.62 - - - - 2.57 0.84 2.04 2.36 1.6 1.71 1.51 0.37 1.28 0.21 -0.77 -0.77 -0.08 -0.6 -0.28 0.28 -2.87 - - - - -
2.04 3.9 -0.44 - 0.02 0.13 -2.48 - 4.35 - - - - -0.64 - - -1.34 -1.17 - - - - - - - - - - - - - - - - - - - - - -1.78 - - - -0.36 1.49 0.11 - - -
2.28 2.58 1.18 -4.65 - -2.77 0.04 -0.26 4.47 -2.16 -0.6 -3.28 -2.79 -1.87 -1.19 -2.13 0.18 -0.15 -0.46 -2.32 -6.24 -5.32 -4.51 -5.3 - -3.52 -0.15 -3.31 - - - -5.22 - - - -3.33 - - -2.78 - -4.61 -4.66 -4.3 -3.93 -2.53 -2.93 1.48 0.21 -0.45
3.08 3.39 1.6 - - - - - 3.84 - - - - - - - -0.03 - - 0.34 - - - - - 1.62 2.68 - - - - - - - - - - - - -0.03 - - - - - - - - -
2.77 2.67 1.23 -0.86 - - -0.94 - 4.11 - -1.75 2.03 - - - - - - - 1.38 -1.95 - - - - - 2.69 - - - - - - - - - - - - 0.52 - - - - - - - - -
3.37 4.6 -0.02 - - 2.2 - - 2.94 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.25 - - - - - - - - -
3.33 4.63 0.54 - - - - - 3.37 - -1.7 - - - - -9.44 - -1.36 - - - - -1.14 0.32 - - - - - - - - - - - - - - - - - - - - - - - - -
2.26 2.34 -0.47 1.58 -2.66 -0.27 1.29 0.96 3.65 -0.41 0.64 - -0.97 0.03 -2.04 -2.07 1.28 -0.22 - -0.17 -3.85 -3.31 -2.97 -4.03 1.32 -0.01 -1.4 - - - -2.48 -3.03 - - -2.0 - -3.29 - - -3.51 -2.96 -3.51 -2.47 0.49 0.17 -1.61 -1.91 -2.84 -1.28
2.13 1.06 -1.85 -3.4 -2.29 - -2.43 -4.05 5.32 -4.7 -2.21 - - - - - -8.38 -3.79 - -2.85 -8.96 -8.42 -8.59 -7.0 -2.06 -3.18 -1.47 - - - - - - - - - - - - - - - - -2.78 -1.27 -4.26 -5.19 -5.54 -
2.38 4.24 - - - 2.99 - - 4.02 - -1.87 - - - - - - -2.63 - -5.75 - - - -2.03 - - - - - - - - - - - - - - - - - - - -3.09 - - - - -
2.39 3.24 - - 2.16 - 0.96 - 3.83 - -2.24 - - - - - - - - - - - - - - - - - - - - -0.62 - - - - - - - - - - - 0.2 3.34 0.58 - - -
2.2 4.01 - - - - - - 4.79 - -4.09 - - - - - - - - - - - - - - - - - - - - -0.71 - - - - - - - - - - - - - - - - -
3.14 2.58 -2.68 - 1.03 - - - 3.91 0.47 0.58 - -0.57 0.27 - - - -0.38 - -3.12 - - - -1.6 1.53 - - - - - - -1.58 - - - - - - - -3.04 - - - -1.03 - - 1.23 0.95 1.53
1.74 3.83 - - - - - - 4.78 - -2.96 - - - - - -1.21 -1.49 - - - - - - - 1.51 - - - - - - - - - - - - - -2.81 - - - - - - - - -
2.31 3.21 -2.01 -2.21 -0.0 - -0.7 -2.95 3.77 - -1.65 -1.42 - 0.33 - - -3.12 -1.91 - -0.23 -2.23 -1.89 -2.16 -1.32 1.44 - - 2.33 - - - - - 0.67 - 0.16 - 1.34 - -1.81 -1.5 - - -3.14 -0.15 - - - -
1.26 3.97 - - - - - - 4.24 - -0.99 - - - - - - -1.38 - - - -23.59 - - 3.39 - - - - - - - - - - - - - - -0.99 - - - -1.81 - - -14.56 - -16.3
3.85 4.55 3.48 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
5.61 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
2.38 4.98 - - - - - - - - - 3.6 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.81 3.26 0.1 0.99 1.27 2.02 - - 1.28 - -5.19 - - 0.64 - - - - - 0.33 - - -1.45 - - - - - - - - - - - 2.98 - 1.56 2.17 - -2.24 0.72 1.12 0.48 - - - - - -
1.08 0.93 -2.62 1.08 - 4.26 - - -0.3 - -5.24 - - 0.28 - - - - - - - - - - 4.39 - - - - - - - - - - - - - - -2.19 - - -1.45 - - - - - -
-0.07 -1.58 -3.8 0.05 0.08 4.92 -0.16 -0.1 3.69 -1.96 -4.81 -6.68 - - - - -6.94 -4.96 - - -8.69 -7.99 -8.44 - -3.92 - - - - -5.13 - -6.03 -4.87 - - - - - - - -7.69 - -6.02 -6.6 - -5.83 - -4.67 -
1.44 4.01 1.52 - - -0.4 0.3 -2.28 3.77 - -7.52 - - 0.55 - - - - - 0.68 - - - - - - 3.06 - - - - - - - - - - - - - - - - - - - - - -
2.76 4.09 - -0.14 - - -0.15 - 3.91 -1.39 -1.31 - - 1.06 - - -0.34 0.93 - 0.86 - - - - - - - - - - - - - - - - - - - -0.5 - - - -2.22 - - - - -
0.92 1.62 1.77 -0.74 - 3.61 0.16 0.69 3.26 -1.53 -1.82 -1.68 - - - - -1.87 -4.81 - -1.05 -1.45 -1.9 -1.7 -1.14 - -0.22 0.74 -0.07 0.87 - - -0.4 0.17 - - - - - - -1.3 -3.31 - - -2.64 1.46 -1.14 - 0.37 -
2.98 4.37 - 2.32 - - - - 3.72 - - - - - - - - 1.18 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.