Heatmap: Cluster_483 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Cambium and expanding xylem
Cambium
Expanding xylem
Expanding and mature xylem
Maturing xylem
Maturing xylem and dead early wood
Wood
Dead early and late wood
Dead early wood
Dead late wood
Vegetative shoots - needles
Vegetative shoots - stem
Vegetative shoots
Girdled twig - stem
Dried twig - needles
Girdled twig - needles
Needles
Needles - dawn
Needles - later afternoon
Needles - midday
Needles - night
Buds
Female flower
Male flower
Pineapple galls
Somatic germinants - abnormal type
Somatic germinants - normal type
Cell culture - H20 - 5 days
Cell culture - KI added - 5 days
Cell culture - KI added - 20 days
Cell culture - KI removed - 4 days
Cell culture - KI removed - 12 days
Cell culture - solid medium
-5.36 -5.73 -8.82 -6.04 -7.22 - -2.02 -3.69 - -3.01 0.47 -0.07 -0.51 -1.06 -0.17 -0.76 0.39 0.66 1.04 0.67 1.17 -0.21 -0.81 -2.67 0.55 1.49 1.59 1.23 -1.19 -1.38 0.86 1.81 0.39
-3.31 -3.62 -4.31 -5.33 -4.57 -4.44 -0.44 -5.24 -2.42 -5.92 -0.76 1.08 -0.62 0.97 -2.25 -0.83 0.7 -0.68 -0.04 -0.61 -0.48 0.06 -0.49 0.87 0.45 1.41 1.36 1.41 0.76 0.32 0.53 0.99 0.84
-4.11 -4.59 -6.55 -6.77 -4.3 - -0.93 -4.79 -4.07 - 1.46 1.3 -2.16 -0.4 0.45 1.8 -0.33 0.74 1.18 0.05 0.24 -1.45 -2.52 -1.78 0.45 1.96 1.66 -1.08 0.9 -0.14 -2.09 -1.52 0.22
-3.38 -1.78 -4.53 - -5.92 - 0.66 -6.47 - -7.49 -3.78 1.56 -0.39 0.95 -4.49 -3.58 0.3 -2.62 -3.36 -3.28 -4.93 -0.75 0.15 -1.78 1.34 1.9 2.28 0.46 0.24 0.78 1.31 1.7 -1.49
-1.71 -1.76 -1.61 -1.36 -1.84 -1.36 -1.4 -2.41 -2.53 -0.66 0.69 -0.51 -1.1 0.22 1.0 1.01 -0.75 1.04 0.81 0.64 0.81 -1.29 -0.08 -1.31 -0.45 0.59 0.7 1.13 -0.12 -0.33 0.88 0.56 0.19
-0.79 -1.14 -0.5 -0.6 -0.3 -0.64 -0.05 -1.08 -0.91 -0.49 0.19 0.15 -0.15 0.01 -0.46 0.25 0.06 0.54 0.09 0.14 0.27 -0.2 -0.05 -0.21 0.23 0.66 0.69 0.11 0.36 0.5 0.14 0.19 0.52
-3.53 -3.83 -2.49 -2.96 -3.11 -1.17 -2.76 -2.35 -2.69 -1.18 0.24 -0.11 -2.41 -1.2 0.97 -0.21 -0.5 0.48 0.1 0.94 0.31 -1.55 -4.24 -0.58 -2.77 1.35 1.37 1.11 0.43 1.3 1.02 1.5 1.0
-5.09 -4.6 -6.77 -5.15 -6.2 -6.11 -0.43 -4.87 -3.13 -4.69 -0.88 1.14 0.0 0.82 -1.33 -0.63 0.5 -0.65 -0.21 -0.55 -0.38 0.3 -0.23 1.16 0.6 1.2 1.13 1.44 0.72 0.27 0.52 1.01 0.74
-0.76 -0.94 -1.29 -0.78 0.05 0.56 -1.26 -1.71 -1.6 -0.92 0.06 -0.23 -0.68 -0.73 0.87 0.17 0.36 0.21 0.11 0.55 0.25 -0.42 -0.72 -1.35 0.23 0.94 1.15 0.08 0.49 0.74 0.47 -0.05 0.04
-3.35 -4.53 -4.33 -3.97 -5.44 -3.22 -0.49 - -4.21 -4.79 -0.09 0.12 -0.73 -0.7 1.17 0.51 0.27 0.66 0.06 0.23 0.3 -0.34 -0.86 -1.93 0.07 1.09 1.21 0.8 0.86 1.05 0.92 0.83 1.18
-2.12 -1.44 -1.48 -1.17 -1.48 -1.65 -0.73 -1.09 -2.79 -2.24 0.42 0.6 -0.09 0.27 0.49 0.4 -0.3 -0.73 0.15 0.0 0.43 0.57 1.05 -0.55 0.55 1.28 1.35 0.07 -0.07 -0.11 0.2 0.38 -0.27
-3.06 -1.91 -3.05 -3.69 -4.95 -2.76 -0.53 -5.14 -6.72 -5.47 0.33 0.78 -0.69 -1.29 0.22 -0.13 -0.5 -0.07 -0.13 0.61 0.66 0.18 1.21 0.25 -0.64 1.01 1.09 0.74 0.3 0.49 1.32 1.46 -0.42
-1.31 -1.5 -1.19 -1.55 -1.34 -2.17 -1.04 -1.73 -1.71 -2.21 0.48 -0.27 0.45 -0.83 0.68 0.47 0.73 0.77 0.45 0.41 0.6 -0.08 0.36 -0.33 0.9 0.78 0.98 0.45 -0.17 -0.36 0.2 0.48 -0.61
-1.96 -1.66 -3.77 -3.2 -3.01 -3.53 -0.33 -1.9 -1.07 -1.43 -0.01 0.77 -0.31 0.87 1.23 0.95 -1.1 0.25 -0.39 0.36 0.2 0.7 -0.12 -0.13 0.08 0.93 0.99 0.07 0.29 0.46 0.35 0.38 0.06
-1.53 -1.86 -1.92 -2.12 -2.22 -2.42 -1.12 -1.5 -2.09 -2.88 -0.41 0.45 0.65 -0.18 -0.36 -0.77 0.54 -0.58 -0.62 -0.55 -0.85 -0.2 -0.58 1.35 0.55 1.23 1.15 1.39 0.19 0.05 1.47 0.91 -0.32
-3.81 -1.83 -3.87 -2.11 -1.96 -2.73 -1.37 -0.7 -2.59 1.1 0.71 -0.32 -0.81 -0.41 0.53 0.19 0.13 0.91 0.65 0.4 0.71 -0.16 -0.81 -2.67 0.57 1.17 1.27 0.73 -1.43 -1.63 0.53 1.21 -0.13
-4.16 -3.73 -5.77 -6.88 -3.38 - -1.85 -3.04 -5.19 -1.11 0.7 0.29 -0.33 -0.21 0.7 0.67 0.03 0.76 0.92 0.6 0.94 -0.08 -1.09 -1.82 0.67 1.35 1.41 0.82 -1.31 -1.57 0.79 1.3 -0.15
-2.69 -2.88 -1.69 -1.22 -0.79 -0.56 -0.76 -2.77 -2.46 -2.17 0.31 -0.14 0.56 -0.28 0.91 0.37 0.84 0.32 0.19 0.28 0.28 1.1 -1.49 -0.85 0.92 0.89 0.89 0.19 0.11 0.27 0.23 0.24 -0.12
-2.61 -3.41 -2.32 -1.85 -1.14 -0.17 -1.8 -1.92 -1.73 -1.12 -0.92 -0.49 0.06 -0.76 -0.04 0.2 0.1 -0.69 -1.17 -1.45 -0.76 0.24 0.13 0.7 0.31 1.46 1.37 1.3 0.62 0.07 1.54 1.19 -0.3
-1.19 -1.59 -1.23 -4.88 -3.82 - 0.74 -1.7 - -1.52 -1.0 0.28 -0.66 - 0.69 0.69 -0.53 - -2.2 0.78 -1.65 -0.46 0.29 -0.52 -0.23 1.59 1.64 1.14 1.31 0.28 1.09 1.17 -0.08
-1.55 -1.3 -1.68 -1.77 -1.5 -1.78 -1.64 -2.64 -3.57 -2.08 0.69 -1.62 -0.76 -2.31 0.32 0.53 -0.21 0.98 0.89 0.67 0.82 -0.81 -0.33 -1.99 0.22 0.96 0.91 0.92 0.8 0.93 0.45 0.48 0.86
- - - - - - - -6.17 - - 1.1 -4.0 0.92 -3.99 0.97 2.49 -0.73 0.77 1.47 1.14 1.34 -4.49 -1.05 -3.25 0.18 1.8 1.77 -1.89 -0.92 -0.58 -1.63 -1.39 -0.75
- - - -3.96 - - - - -6.38 - 1.75 -3.8 1.28 -2.2 0.76 1.73 -0.27 1.8 1.24 1.1 1.04 - - - 0.57 2.18 2.31 - - - - - -
- - -5.57 -5.74 -5.48 -4.2 -3.48 -4.89 -4.45 - -1.68 0.34 -3.12 -0.87 - - -2.96 - -2.49 - - -0.12 -4.16 -0.97 -2.42 2.17 1.93 2.29 1.96 -0.65 2.29 1.97 0.97
-6.9 -7.15 -4.92 -4.31 -3.57 -1.67 -3.98 -2.47 -1.52 -2.36 0.21 -1.33 0.2 -1.52 0.6 0.26 0.61 0.43 -0.17 0.52 0.21 0.78 -0.85 0.07 0.47 1.1 1.06 1.31 0.04 0.17 0.87 1.57 0.31
-0.57 -0.39 -0.61 -1.03 -0.53 -0.07 -0.98 -0.22 -0.04 -0.09 0.12 -0.69 -0.16 -0.54 0.21 0.78 -0.09 0.44 0.54 0.37 0.15 -0.94 -0.06 -0.94 -0.25 0.7 0.7 0.24 0.13 0.17 0.48 0.5 -0.2
-2.74 -2.73 -3.43 -2.57 -2.49 -2.55 -1.73 -2.6 -2.66 -1.99 -0.33 0.1 -1.45 0.01 0.88 0.19 0.2 0.64 0.21 0.87 0.63 0.48 -0.56 -0.71 -0.25 1.32 1.19 1.53 -0.98 -1.86 1.04 1.49 -0.17
-4.48 -4.9 -3.6 -3.54 -3.26 -2.15 -3.64 -2.2 -2.6 -2.75 0.61 0.01 0.28 -1.13 1.65 2.23 -1.7 0.74 0.57 -0.35 0.53 0.24 -0.58 0.37 1.01 1.4 1.45 -0.7 -0.6 -0.73 -0.77 -0.7 -1.03
-3.19 -2.4 -2.53 -2.39 -2.41 -2.29 0.67 -3.9 -3.92 -3.03 -0.55 1.59 -0.18 0.65 0.09 -0.41 0.05 0.24 -0.94 0.24 0.0 0.03 0.37 -0.4 -0.29 1.16 1.08 0.74 0.99 0.49 0.29 0.32 0.53
-2.58 -2.83 -2.74 -2.94 -2.9 -3.19 -1.48 -5.13 -5.46 -3.72 0.26 -0.65 0.57 -0.57 0.68 1.26 -0.46 0.62 0.01 0.1 0.6 0.04 1.48 -0.79 0.37 0.72 0.79 1.12 -0.07 -0.52 1.17 0.76 -0.02
-1.56 -1.63 -3.02 -1.67 -1.62 -0.74 -0.99 -5.03 -4.34 -5.72 -0.19 -0.75 -0.44 -1.22 0.08 -1.6 0.7 -0.75 -0.34 -1.01 -1.15 0.52 0.28 -0.13 0.31 1.09 1.06 1.49 0.9 0.97 1.5 1.07 0.86
-4.63 -6.72 - - - - -4.4 - - -5.03 0.47 -0.84 -1.05 -1.22 -0.06 0.89 -0.21 0.06 0.17 0.15 0.01 -2.76 -1.46 -2.86 -0.36 1.33 1.7 1.99 0.55 0.53 1.7 2.04 -0.67
-3.16 -3.15 -3.92 -3.41 -3.73 -3.55 -0.14 -2.51 -1.41 -2.87 -0.76 1.06 -0.2 0.9 -1.55 -0.63 0.65 -1.16 -0.28 -0.71 -0.75 0.13 -0.38 1.06 0.51 1.2 1.18 1.34 0.77 0.23 0.62 0.92 0.71
-1.94 -2.03 -2.26 -2.8 -3.33 -3.34 -1.75 -2.93 -3.47 -3.22 0.72 -0.68 0.48 -0.91 1.01 -0.06 0.05 1.12 0.82 0.1 0.72 -1.03 1.01 0.11 0.14 0.66 0.72 0.7 0.05 0.11 1.16 0.93 -0.6
-2.66 -3.13 -2.48 -2.74 -2.46 -2.55 -0.51 -3.93 -2.93 -3.3 0.23 1.58 -0.23 1.69 0.47 -0.15 -1.37 -0.32 -0.28 -0.15 -0.4 1.2 0.59 -0.46 0.67 1.31 1.08 0.28 -0.36 -0.22 -0.11 0.25 0.21
-1.07 -1.91 -0.55 -0.88 -0.69 -0.59 -0.36 -1.81 -1.55 -1.81 0.11 1.55 -0.12 1.64 0.41 -0.01 -1.33 -0.65 -0.66 -0.36 -0.43 1.3 0.61 -0.28 0.97 1.04 0.77 -0.42 -1.05 -0.92 -0.7 -0.15 -0.5
-3.82 -3.62 -3.81 -3.86 -3.93 -4.32 -1.75 -5.23 -6.86 -3.26 0.99 -0.33 -1.22 0.62 1.02 1.44 -0.62 1.05 1.07 0.93 0.99 -1.16 0.1 -1.78 -0.6 0.77 0.86 1.05 -0.23 -0.37 0.83 0.43 0.2
-3.6 -6.0 -5.27 - -4.39 -4.96 -5.18 - -7.15 - 0.47 0.53 0.55 -2.94 -0.03 1.3 -2.63 0.51 0.68 -0.02 -0.67 -0.68 -5.87 - 0.28 0.48 0.88 1.37 1.26 1.16 1.67 1.21 1.21
-0.68 -0.58 -0.89 -0.61 -0.41 -0.72 0.11 -2.55 -2.08 -2.03 0.16 0.02 0.28 0.15 -0.38 -0.03 0.21 0.27 -0.08 -0.16 0.1 0.28 0.03 -0.05 -0.12 0.79 0.81 0.24 0.78 0.64 0.3 0.08 0.67
-12.95 -12.05 -14.28 - -11.64 - -2.72 - -13.07 - 1.54 -1.25 0.01 0.21 0.95 1.51 0.16 1.19 0.94 1.24 1.03 -1.23 0.29 -2.49 0.35 0.53 0.42 1.02 -0.88 -1.69 0.75 1.01 -1.3
- -5.61 - -5.76 - - -2.5 - - - 0.25 2.57 -0.64 1.1 -1.32 0.02 -1.66 -0.93 0.53 0.45 0.52 1.17 -5.77 -1.09 0.52 1.91 1.6 0.78 -0.58 -1.69 -0.43 0.24 -0.39
-3.03 -2.58 -3.37 -3.76 -3.27 -2.06 -1.93 -2.49 -2.84 -1.62 1.2 -1.38 -0.21 -0.69 1.06 1.23 0.18 1.4 1.39 1.12 1.27 -1.65 -1.87 -2.34 -0.08 0.54 0.78 0.81 -1.55 -1.07 0.86 1.06 -1.53
-2.77 -2.75 -3.29 -3.38 -3.32 -3.9 -0.51 -4.83 -5.56 -3.62 0.18 0.04 -0.45 0.11 -0.26 0.29 -0.04 0.26 0.24 0.56 0.44 0.25 0.92 -0.06 -0.39 1.08 1.08 1.26 0.1 0.37 1.14 1.13 0.14
-4.45 -3.43 -5.16 -5.06 -4.82 -2.62 -4.65 -5.83 -4.74 -2.19 -0.62 -1.22 0.39 -2.11 1.77 1.92 -1.16 0.26 0.12 -0.65 -0.52 -1.25 -0.55 -0.81 0.81 1.35 1.52 0.33 0.99 1.04 1.04 0.84 -1.36
-2.35 -2.4 -2.34 -2.67 -2.63 -2.65 0.64 -3.02 -2.79 -2.74 0.46 -0.01 -1.05 0.31 -0.44 -0.11 0.06 0.31 0.32 0.91 0.33 -0.1 -1.15 0.66 -0.82 1.35 1.22 0.78 0.55 0.59 0.67 0.23 0.76
- -5.26 -7.79 - -7.3 - -6.44 -7.82 -6.39 - -0.13 1.05 1.11 0.15 -2.51 -2.3 1.02 -1.37 -4.41 -3.16 -3.12 1.58 -1.66 -0.62 1.31 1.93 2.07 0.88 -1.5 -0.61 0.89 1.74 0.17
-1.81 -1.45 -4.43 -5.71 -3.16 -1.95 -3.14 -2.65 -2.34 -2.62 1.2 0.29 -0.37 -1.1 0.66 1.67 -0.23 -0.33 1.3 0.51 0.84 -1.62 -4.22 -4.35 1.02 2.21 1.9 -1.65 0.03 -0.34 -2.18 -2.28 0.11
-0.48 -0.65 -0.89 -0.74 -0.82 -0.65 -1.2 -1.28 -0.74 -0.48 0.11 -0.81 -1.33 -1.74 1.25 0.2 -0.05 0.37 0.75 0.87 0.59 -0.7 -0.91 -1.2 -1.38 1.03 1.1 0.4 0.16 0.61 0.46 0.52 0.11
-2.68 -2.46 -2.84 -2.76 -2.64 -1.98 -1.31 -2.79 -2.39 -1.83 0.49 0.44 -1.23 -0.2 0.32 -0.58 -0.14 0.92 0.89 0.01 0.71 -0.21 -1.13 -2.38 -0.41 1.18 1.08 0.5 1.18 1.03 0.8 0.65 1.01
-0.75 -0.78 -0.58 -0.82 -0.85 -1.84 -1.1 -1.85 -1.91 -2.39 0.43 -0.62 -0.63 -1.05 0.73 0.76 0.14 0.78 0.76 0.36 0.58 -0.41 -0.38 -0.47 0.1 0.68 0.9 0.86 0.12 -0.06 0.57 0.79 -0.1
-1.41 -0.71 -2.9 -2.68 -2.32 -1.6 -0.14 -2.07 -1.5 -1.96 -0.88 0.4 0.1 -0.25 -0.27 -1.11 0.61 -1.64 -1.26 -2.52 -1.46 -0.62 1.0 0.92 0.56 0.86 0.93 1.05 0.79 0.87 1.29 1.21 0.52
-1.35 -1.03 -2.56 -2.01 -2.23 -5.3 -0.25 -5.99 - -2.11 -0.26 -0.06 0.49 -0.01 -0.75 -0.23 0.28 -1.07 -0.31 -0.15 -0.08 0.71 -1.02 0.1 0.02 1.42 1.49 0.51 1.34 1.2 0.59 -0.19 1.04
- - - - - - -7.39 -7.1 - - -0.13 1.15 0.18 -0.04 -1.94 0.79 -2.6 0.47 0.15 -1.22 -0.2 -0.12 0.89 -3.41 0.1 1.04 1.21 1.11 0.44 0.79 1.8 1.89 0.11
- -6.71 - - - - - -6.64 -3.09 - -0.04 0.95 0.99 -0.46 -0.2 1.38 -2.64 -0.42 -0.68 -1.36 -0.72 0.22 1.72 - 1.7 0.65 1.12 0.51 -0.61 -0.2 1.57 1.45 0.18
-5.38 -3.94 -5.05 -7.81 -6.3 - 0.7 -6.09 - - -1.25 0.51 -0.05 -0.73 0.31 -0.31 0.23 -0.59 -0.95 -0.11 -0.31 1.0 0.47 0.58 1.07 1.17 1.15 0.8 0.46 0.86 0.69 0.94 0.83
-2.22 -2.58 -3.26 -2.84 -1.89 -2.86 -0.63 -4.07 -4.5 -4.09 0.33 0.23 -0.06 -0.17 -0.19 0.29 -0.35 0.5 -0.15 0.41 0.25 0.47 1.07 0.05 0.09 1.26 1.29 1.2 -0.25 -0.08 1.0 0.97 -0.54
- - - - -8.96 - -5.54 -5.15 -6.73 -6.92 0.08 0.3 0.42 -1.81 0.09 1.91 -2.75 0.21 0.68 -0.08 0.76 -0.86 0.04 -4.86 0.56 0.61 0.48 1.17 0.19 0.32 2.17 1.46 -0.45
-1.93 -0.45 -4.92 - - - -4.4 -3.48 -4.15 - 0.06 1.1 0.82 -0.95 -2.15 0.93 -2.26 0.25 -1.82 -0.46 -0.77 0.59 1.46 - 1.64 0.97 1.31 0.22 -0.6 -0.82 1.52 1.7 -0.26

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.