Heatmap: Cluster_374 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Cambium and expanding xylem
Cambium
Expanding xylem
Expanding and mature xylem
Maturing xylem
Maturing xylem and dead early wood
Wood
Dead early and late wood
Dead early wood
Dead late wood
Vegetative shoots - needles
Vegetative shoots - stem
Vegetative shoots
Girdled twig - stem
Dried twig - needles
Girdled twig - needles
Needles
Needles - dawn
Needles - later afternoon
Needles - midday
Needles - night
Buds
Female flower
Male flower
Pineapple galls
Somatic germinants - abnormal type
Somatic germinants - normal type
Cell culture - H20 - 5 days
Cell culture - KI added - 5 days
Cell culture - KI added - 20 days
Cell culture - KI removed - 4 days
Cell culture - KI removed - 12 days
Cell culture - solid medium
-2.15 -1.84 -2.43 -1.95 -2.12 -1.34 -0.04 -2.37 -2.22 -1.57 0.22 0.41 0.14 0.62 -0.1 0.63 0.44 0.28 0.3 0.47 0.26 0.41 0.25 -0.64 0.05 0.4 0.62 0.17 0.64 0.86 0.28 0.24 0.82
-0.42 -0.53 -0.84 -1.38 -1.03 -2.57 -0.07 -1.07 -2.09 -1.91 -1.49 -0.93 -1.27 -0.49 -1.84 -1.51 1.17 -1.94 -1.04 -1.02 -1.17 -0.83 -0.33 -1.94 -1.65 0.77 1.05 1.03 1.68 1.55 0.92 1.13 1.79
-3.45 -3.32 -4.66 -4.97 -4.76 -4.82 0.21 -5.31 -4.19 -2.93 -0.79 0.32 0.36 0.29 -0.47 -0.24 0.73 -0.49 -0.29 0.35 0.17 0.5 0.88 0.4 0.08 0.51 0.75 0.46 1.08 1.35 0.67 0.34 1.12
-0.92 -0.57 -1.76 -2.26 -2.09 -2.07 0.56 -1.86 -2.36 -2.03 -0.57 0.18 0.8 -0.1 -0.58 -0.15 0.92 -0.11 -0.78 -0.85 -0.51 0.33 0.21 0.33 0.55 0.37 0.58 0.42 0.98 1.09 0.49 0.14 1.05
-1.21 -0.62 -1.9 -1.48 -1.57 -1.25 0.09 -1.4 -1.46 -1.16 -0.21 0.44 0.47 0.45 -0.12 0.04 0.51 -0.35 -0.18 -0.41 0.05 0.71 0.5 0.52 0.34 0.13 0.39 -0.03 0.76 0.91 0.19 -0.14 0.78
-1.58 -1.26 -1.93 -1.86 -1.51 -1.2 -0.04 -1.6 -1.39 -1.13 -0.19 0.35 0.35 0.06 0.26 -0.1 0.59 -0.14 -0.19 -0.2 -0.26 0.54 0.51 -0.12 -0.05 0.48 0.56 0.58 0.79 0.81 0.55 0.39 0.85
-0.9 -0.81 -1.48 -1.63 -1.53 -1.37 0.41 -1.24 -1.23 -1.31 -1.34 0.07 0.47 0.22 -1.22 -0.7 0.74 -1.12 -1.16 -0.93 -1.09 0.9 0.89 0.09 0.44 0.29 0.57 0.64 0.97 1.08 0.77 0.41 0.82
-1.3 -1.37 -1.52 -1.4 -1.14 -0.9 0.48 -1.27 -1.17 -1.59 -0.48 0.38 0.25 0.59 -0.39 -0.23 0.3 -0.01 -0.26 -0.25 -0.27 0.54 0.52 0.12 -0.01 0.18 0.32 0.44 0.92 0.99 0.35 0.26 0.84
-1.0 -2.11 -1.72 -2.07 -1.59 -1.43 -0.61 -1.87 -2.17 -2.33 0.13 0.15 0.29 -0.11 0.48 0.42 0.61 0.59 0.18 0.1 0.05 0.51 0.42 -0.22 0.29 0.52 0.78 0.12 0.59 0.81 0.23 0.08 0.81
-1.08 -0.8 -1.41 -1.1 -1.11 -0.72 -0.25 -0.82 -0.86 -0.25 0.18 0.41 -0.02 0.36 -0.47 -0.06 0.03 0.23 0.12 0.03 0.04 0.45 0.25 -0.33 -0.25 0.14 0.38 0.23 0.89 0.86 0.42 0.18 0.67
-3.02 -2.3 -3.34 -1.96 -3.56 -2.47 0.48 -4.16 -4.22 -2.71 -0.4 0.77 0.23 -0.2 0.31 -0.74 0.96 -0.45 -0.21 -0.66 -0.44 0.67 0.93 0.26 -0.02 0.5 0.84 0.7 0.75 0.78 0.98 0.93 0.44
-0.95 -1.07 -1.49 -1.41 -1.39 -1.33 0.44 -1.85 -1.95 -1.51 0.04 0.35 -0.31 0.62 0.28 -0.22 0.7 -0.04 -0.51 -0.13 0.0 0.34 0.51 0.41 -0.37 0.1 0.29 0.45 0.86 0.87 0.54 0.4 0.53
-1.6 -1.31 -1.78 -1.85 -1.69 -1.9 0.69 -1.94 -2.14 -2.14 -0.61 0.18 0.17 0.35 -0.21 -0.06 0.65 -0.2 -0.28 0.11 -0.2 0.52 0.62 0.4 -0.49 0.37 0.6 0.38 0.88 0.92 0.38 0.36 1.1
-1.44 -1.41 -1.75 -1.37 -1.37 -0.92 0.16 -1.27 -1.07 -0.9 -0.1 0.51 0.24 0.46 -0.02 0.6 0.5 -0.35 -0.22 -0.01 -0.2 0.43 0.31 0.14 -0.01 0.28 0.48 0.26 0.64 0.8 0.24 0.06 0.84
-5.6 -5.82 -9.22 -7.5 -6.22 -6.48 -0.09 -6.33 -6.46 -4.73 -0.38 0.35 0.7 0.23 -0.11 0.27 0.9 -0.42 0.39 0.29 0.2 0.73 0.78 -0.0 0.11 0.32 0.63 0.61 1.01 1.0 0.6 0.18 1.15
-0.93 -1.39 -1.24 -1.63 -1.56 -1.21 0.7 -1.68 -1.98 -2.52 -0.33 0.08 -0.11 0.02 0.34 -0.1 0.62 -0.36 -0.17 0.07 0.06 0.34 0.4 0.19 0.28 0.4 0.41 0.34 0.67 0.83 0.44 0.55 0.89
-2.44 -2.89 -2.84 -2.93 -3.41 -2.17 -0.12 -3.22 -2.82 -3.0 -0.33 0.58 0.08 0.02 -0.11 -0.03 0.8 -0.5 -0.16 0.28 -0.01 0.61 0.5 -0.28 -0.24 0.52 0.84 0.74 0.9 1.21 0.77 0.54 1.12
-1.64 -1.6 -1.41 -1.4 -1.31 -1.1 0.3 -1.82 -2.11 -2.19 -0.43 0.42 0.46 0.3 -0.1 -0.21 0.71 0.02 -0.33 -0.44 -0.35 0.9 0.89 0.34 0.51 0.11 0.53 0.32 0.52 0.72 0.35 0.3 0.63
-1.8 -2.05 -1.72 -1.86 -1.22 -1.16 0.43 -1.58 -1.98 -2.26 0.03 0.31 0.05 0.35 0.35 0.32 0.15 0.2 0.06 -0.05 -0.03 0.33 0.58 0.62 -0.27 0.1 0.13 0.43 0.92 0.86 0.46 0.18 0.76
-1.94 -1.25 -2.08 -1.36 -1.54 -1.71 0.7 -2.6 -2.62 -2.29 -0.41 -0.09 -0.54 0.35 -0.17 -0.1 0.75 -0.21 -0.26 0.59 0.02 0.1 0.39 -0.27 -0.52 0.26 0.42 0.91 0.83 0.96 0.95 0.85 0.79
-0.85 -1.03 -0.75 -0.6 -0.94 -1.02 0.57 -0.83 -1.16 -0.99 -0.11 0.39 -0.08 0.32 0.11 0.13 0.46 0.15 -0.0 0.01 0.14 0.51 0.31 0.0 0.07 0.0 0.25 0.08 0.43 0.6 0.23 0.15 0.46
-1.24 -1.36 -1.89 -1.78 -2.21 -1.76 0.26 -1.67 -1.72 -1.64 -0.44 0.49 0.53 0.34 0.34 0.25 0.78 -0.31 -0.2 -0.32 -0.42 0.68 0.82 -0.35 0.5 0.36 0.6 0.1 0.82 0.86 0.31 -0.13 0.64
-2.44 -1.95 -1.53 -0.9 -0.87 -0.77 0.53 -2.89 -3.04 -1.93 -0.21 0.47 0.17 -0.02 -0.64 -0.22 1.5 -0.02 -0.88 -0.85 -0.66 0.75 0.47 0.05 0.5 0.55 0.94 0.05 0.71 0.97 -0.03 0.11 0.66
-1.0 -0.62 -1.34 -0.97 -0.97 -0.69 0.4 -1.33 -1.2 -1.39 -0.52 0.55 0.35 -0.26 -0.19 -0.46 0.9 -0.9 -0.58 -0.76 -0.68 0.77 0.3 0.29 0.53 0.28 0.58 0.22 0.65 1.05 0.33 0.29 0.61
-0.89 -0.91 -0.9 -0.48 -0.63 -0.44 0.81 -1.36 -1.22 -1.27 -0.19 0.28 0.2 0.37 -0.55 -0.17 0.89 0.15 -0.01 -0.08 -0.06 0.43 0.45 -0.19 0.19 0.02 0.4 0.19 0.35 0.55 0.2 -0.04 0.37
-1.44 -1.32 -1.95 -2.15 -1.51 -1.99 0.76 -2.02 -2.86 -1.6 -0.05 0.64 0.03 0.42 0.61 0.14 0.62 -0.09 -0.31 0.03 -0.32 0.13 -0.06 0.54 0.62 0.23 0.45 0.46 0.71 0.48 0.4 0.37 0.6
-0.64 -0.96 -2.08 -1.72 -2.57 -2.66 0.18 -3.83 -4.43 -2.65 -2.26 -0.74 -0.25 0.71 -2.58 -1.21 1.26 -1.08 -0.98 -0.93 -0.9 0.32 -0.13 -2.17 -0.57 0.89 1.02 0.78 1.62 1.65 0.88 0.48 1.66
-1.18 -1.05 -1.96 -2.27 -1.69 -1.1 0.44 -1.57 -1.52 -2.02 -0.47 0.27 0.43 0.67 -0.32 0.03 0.55 -0.17 -0.46 -0.44 -0.44 0.49 0.83 0.34 -0.02 0.4 0.54 0.2 0.91 1.0 0.4 0.03 0.77
-2.18 -1.42 -3.88 -3.85 -4.79 -3.44 0.5 -4.57 -4.9 -5.05 -1.1 0.34 0.65 0.91 -1.96 -0.34 0.95 -0.88 -1.06 -0.82 -1.2 1.07 0.64 -1.06 0.17 0.59 0.63 0.55 1.37 1.34 0.63 0.3 1.46
-2.91 -2.62 -2.78 -2.47 -3.64 -2.58 0.82 -5.61 -5.28 -7.03 -1.19 0.11 1.22 -1.08 -0.93 -0.09 0.91 -0.88 -0.88 -0.39 -0.45 1.01 1.02 0.92 0.71 0.13 0.62 0.43 0.89 0.85 0.62 0.26 1.08
-1.86 -1.59 -1.95 -2.09 -1.94 -1.43 0.49 -2.0 -1.89 -1.58 -0.76 0.38 0.59 0.15 -0.23 -0.5 0.67 -0.74 -0.6 -0.43 -0.8 0.52 0.87 0.29 0.45 0.48 0.68 0.33 1.01 1.05 0.47 0.3 0.97
-1.02 -0.29 -1.87 -1.71 -2.0 -1.12 0.08 -2.82 -2.46 -1.61 -0.43 0.17 -0.18 -0.04 -1.11 -0.5 1.18 -0.45 -0.58 -0.86 -0.45 0.08 -0.26 -0.65 0.05 0.6 0.95 0.06 1.5 1.65 0.21 0.13 1.38
-2.18 -1.8 -2.28 -1.91 -2.24 -1.87 0.65 -2.15 -2.54 -2.31 -0.25 0.48 0.25 0.03 0.24 -0.15 1.0 -0.08 -0.11 -0.35 -0.09 0.27 0.61 -0.25 0.35 0.81 0.95 0.16 0.6 0.88 0.16 0.26 0.95
-0.94 -0.93 -1.32 -1.32 -0.85 -0.83 0.46 -1.91 -1.75 -1.81 -0.79 0.17 0.36 0.14 -0.03 0.06 0.95 0.37 -0.77 -0.43 0.04 0.48 0.4 0.87 -0.12 0.2 0.4 0.07 0.53 0.77 0.26 0.04 0.83
-2.32 -2.14 -2.4 -2.33 -1.62 -1.63 -0.78 -1.62 -1.34 -1.05 -0.3 0.54 0.06 0.71 1.49 0.43 -0.37 -0.09 -0.3 -0.44 -0.19 0.97 0.64 -0.0 0.41 0.17 0.23 0.54 0.43 0.55 0.52 0.31 0.5
-1.05 -0.95 -1.83 -1.84 -1.54 -1.04 -0.17 -1.04 -1.17 -0.82 -0.07 0.44 0.23 0.55 0.12 -0.03 0.02 -0.09 -0.27 -0.03 -0.23 0.59 0.65 -0.12 -0.2 0.22 0.33 0.38 0.72 0.85 0.55 0.26 0.92
-1.76 -1.33 -2.11 -2.05 -1.84 -1.59 0.07 -1.86 -2.0 -1.6 0.02 0.41 0.73 0.47 -0.25 0.09 0.82 -0.03 -0.1 -0.06 -0.13 0.66 0.63 0.07 0.16 0.28 0.5 0.23 0.74 0.8 0.36 0.02 0.75
-6.24 -5.03 -8.09 -6.41 -6.91 - -0.14 -5.99 -7.0 -6.56 0.04 0.41 0.64 0.62 0.06 0.27 0.82 0.15 0.03 0.42 0.38 0.81 0.98 0.12 0.13 0.33 0.67 0.42 0.78 0.9 0.34 -0.07 0.9
-3.55 -4.33 -3.45 -3.87 -3.92 -3.59 0.06 -4.1 -4.89 -4.45 0.53 0.59 -0.07 0.16 0.41 0.5 0.96 0.48 0.3 0.39 0.48 0.18 -0.12 -0.75 -0.01 0.59 0.77 0.48 0.59 0.89 0.63 0.51 0.82
-6.29 -5.98 -6.31 -6.97 -7.77 - -0.07 -9.43 -9.58 -4.51 -2.64 0.7 0.51 -0.19 -0.05 -3.31 1.14 -3.34 -3.09 -2.45 -3.15 0.79 1.09 -0.36 0.33 0.59 0.99 1.08 1.7 1.48 1.26 1.03 1.09
-2.17 -2.35 -2.12 -2.08 -1.82 -1.22 0.24 -2.08 -2.2 -1.88 -0.39 0.25 0.48 0.32 -0.31 -0.06 0.5 -0.12 -0.41 -0.28 -0.28 0.64 0.75 0.57 0.4 -0.07 0.32 0.25 0.64 1.2 0.46 0.23 1.36
-1.47 -2.11 -1.89 -2.55 -1.67 -2.14 0.25 -1.71 -2.03 -1.69 -0.01 0.34 0.32 0.46 0.4 0.06 0.13 -0.18 -0.11 -0.08 -0.11 0.62 0.57 0.33 -0.01 0.51 0.53 0.46 0.69 0.59 0.8 0.44 0.7
-2.41 -2.46 -2.91 -3.17 -3.23 -3.46 0.33 -2.84 -3.83 -2.16 0.1 0.88 0.57 0.57 0.34 0.56 -0.24 -0.46 0.1 0.38 0.26 0.68 0.69 0.37 -0.35 0.2 0.34 0.52 0.68 0.72 0.56 0.23 0.76
-2.07 -1.5 -2.68 -2.5 -2.08 -2.07 0.17 -2.72 -2.48 -2.12 0.22 0.56 0.32 -0.05 0.12 0.27 0.86 -0.5 -0.39 0.02 -0.14 0.69 0.37 -1.16 0.84 0.6 0.84 0.15 0.72 0.92 0.32 0.49 0.87
-1.05 -1.35 -1.09 -0.97 -0.84 -0.77 0.46 -1.31 -1.24 -2.15 -0.38 0.39 0.11 0.18 -0.33 -0.41 0.63 -0.12 -0.45 -0.29 -0.33 0.71 0.34 0.59 0.43 0.27 0.53 0.5 0.51 0.54 0.45 0.37 0.63
-1.96 -2.02 -2.46 -3.1 -2.93 -2.51 0.29 -2.9 -2.98 -3.09 -0.3 0.54 0.32 0.61 1.14 -0.03 -0.07 -0.23 -0.38 -0.16 -0.09 0.81 0.96 0.04 -0.08 0.29 0.38 0.53 0.71 0.81 0.99 0.32 0.46
-1.23 -1.02 -1.14 -1.31 -1.62 -1.41 0.17 -2.03 -2.01 -1.83 -0.25 0.1 0.29 -0.02 0.05 0.12 0.59 -0.1 -0.01 0.22 -0.06 0.36 0.57 0.73 0.04 0.4 0.5 0.6 0.8 0.56 0.44 0.27 0.43
-1.77 -1.9 -2.49 -2.47 -2.67 -1.86 0.21 -2.63 -3.29 -2.19 -0.14 0.44 0.04 0.07 -0.16 0.09 0.86 0.32 0.07 -0.12 0.06 0.51 0.76 -0.16 0.15 0.53 0.74 0.34 0.87 0.87 0.52 0.28 0.87
-2.09 -2.72 -2.53 -3.65 -2.87 -3.6 -0.37 -4.03 -3.03 -3.09 0.32 0.11 0.44 0.53 0.17 0.32 0.71 0.27 0.49 0.28 0.36 0.64 0.58 -0.03 0.37 0.37 0.72 0.03 0.64 0.83 0.42 0.22 0.76
-6.82 -5.76 -6.88 -5.03 -6.3 -5.83 0.27 - -8.09 -8.7 -0.65 0.5 0.24 0.7 -0.44 -0.5 0.86 -0.27 -0.15 0.44 -0.12 0.84 0.77 -0.06 -0.42 0.44 0.67 0.67 0.95 1.17 0.64 0.68 1.31
-1.74 -2.07 -1.79 -2.04 -1.77 -1.42 0.16 -2.97 -2.39 -1.5 0.09 0.56 -0.6 0.74 0.72 0.15 0.42 -0.12 -0.25 0.28 -0.31 0.45 0.44 -0.32 0.62 0.55 0.73 0.21 0.79 0.82 0.3 0.38 0.45
-2.01 -2.48 -2.48 -2.33 -2.54 -2.7 -0.11 -3.12 -3.7 -2.35 -0.16 0.32 0.25 0.38 -0.24 -0.43 0.81 -0.56 -0.05 0.08 0.01 0.57 0.36 0.15 0.61 0.55 0.59 0.81 0.67 0.92 0.76 0.78 0.88
-1.23 -1.2 -1.56 -1.43 -1.61 -1.13 0.29 -1.59 -1.49 -1.38 -0.23 0.23 0.25 0.42 -0.31 0.08 0.72 0.15 -0.03 0.09 0.04 0.42 0.45 0.25 0.09 0.25 0.53 0.21 0.78 1.0 0.27 -0.07 0.59
-2.1 -2.73 -1.61 -1.78 -1.24 -1.32 0.7 -1.68 -1.92 -2.39 -0.69 0.59 0.47 0.02 -0.1 -0.59 1.24 -0.56 -0.48 -0.27 -0.4 0.91 0.49 0.78 0.35 0.4 0.63 0.67 -0.01 0.27 0.59 0.79 0.17
-1.98 -1.56 -1.62 -1.49 -1.02 -0.63 -0.23 -1.16 -0.8 -0.95 -0.12 -0.01 0.13 0.4 0.69 -0.03 -0.23 0.08 -0.4 -0.05 -0.36 0.19 0.47 -0.06 0.16 0.41 0.32 0.48 0.86 0.86 0.69 0.36 0.84
-7.21 -4.25 -4.88 -5.88 -6.62 - 0.28 -4.74 -7.42 - -0.57 1.04 0.09 1.15 -0.07 -0.18 0.91 -2.03 0.22 -0.32 -0.43 0.82 0.83 -0.18 -0.48 0.29 0.56 0.44 0.97 1.1 0.61 0.84 1.23
-1.61 -1.51 -1.89 -1.97 -1.68 -1.0 0.5 -2.01 -1.84 -1.98 -0.26 0.28 0.44 0.62 -0.24 0.12 0.09 0.18 -0.31 -0.15 -0.03 0.64 0.49 0.01 -0.13 0.07 0.3 0.55 0.81 0.97 0.66 0.27 0.94
-3.68 -4.71 -4.17 -4.59 -4.31 -3.65 -0.17 -5.18 -5.05 -3.38 -0.06 0.33 0.0 0.23 0.51 0.0 0.96 -0.17 0.05 0.16 0.17 0.62 0.3 -0.24 -0.53 0.69 0.97 0.53 1.0 1.16 0.54 0.47 1.2
-1.5 -1.3 -1.95 -1.96 -1.9 -1.39 0.17 -1.67 -1.85 -1.43 -0.26 0.51 0.62 0.35 -0.55 -0.33 0.29 -0.26 -0.78 -0.56 -0.6 0.67 0.56 -0.02 -0.13 0.28 0.42 0.53 1.11 1.12 0.66 0.44 1.17
-1.35 -1.42 -1.7 -1.83 -1.7 -1.3 -0.0 -1.69 -1.78 -1.66 -0.08 0.78 0.15 0.63 -0.15 -0.29 0.73 -0.01 -0.3 -0.23 -0.19 0.43 0.57 -0.31 0.1 0.52 0.71 0.26 0.7 0.9 0.31 0.27 0.92
-1.4 -1.57 -1.55 -1.55 -1.37 -1.54 0.64 -2.15 -2.32 -1.74 0.33 1.03 0.34 0.56 -0.04 0.01 0.73 -0.04 -0.11 -0.22 -0.09 0.69 0.29 -0.24 0.61 0.25 0.55 -0.08 0.46 0.6 -0.03 -0.1 0.65
-1.46 -0.98 -1.88 -1.71 -1.79 -1.25 0.1 -1.48 -1.38 -0.97 -0.31 0.28 0.4 0.53 0.11 -0.33 0.49 -0.14 -0.34 -0.2 -0.13 0.97 0.51 -0.3 -0.42 0.33 0.6 0.15 0.83 1.16 0.32 0.04 0.9
-2.81 -3.08 -3.04 -4.04 -3.02 -3.04 0.05 -3.58 -3.61 -4.25 -0.02 1.33 0.38 0.19 0.14 0.2 0.99 -0.1 0.05 -0.09 0.03 0.71 0.66 0.13 0.7 0.4 0.62 0.7 0.23 0.19 0.28 0.73 0.44

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.