Heatmap: Cluster_492 (HCCA cluster)

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(Showing raw values)

Gene
Cambium and expanding xylem
Cambium
Expanding xylem
Expanding and mature xylem
Maturing xylem
Maturing xylem and dead early wood
Wood
Dead early and late wood
Dead early wood
Dead late wood
Vegetative shoots - needles
Vegetative shoots - stem
Vegetative shoots
Girdled twig - stem
Dried twig - needles
Girdled twig - needles
Needles
Needles - dawn
Needles - later afternoon
Needles - midday
Needles - night
Buds
Female flower
Male flower
Pineapple galls
Somatic germinants - abnormal type
Somatic germinants - normal type
Cell culture - H20 - 5 days
Cell culture - KI added - 5 days
Cell culture - KI added - 20 days
Cell culture - KI removed - 4 days
Cell culture - KI removed - 12 days
Cell culture - solid medium
0.28 0.32 0.13 0.05 0.23 0.28 3.15 0.24 0.3 0.28 21.19 3.22 11.11 4.08 19.92 23.35 14.76 19.57 31.41 30.98 32.88 3.08 3.92 2.3 10.56 4.31 4.73 1.81 3.42 4.4 2.45 3.2 4.69
1.85 3.06 1.67 1.84 1.56 0.78 6.66 1.34 0.57 1.22 24.12 5.47 16.66 7.99 19.63 25.04 20.98 30.48 30.21 25.99 24.04 10.83 9.7 9.16 14.22 15.78 16.18 13.2 24.18 27.41 16.52 14.7 19.73
12.3 12.26 9.0 12.01 8.94 7.58 21.95 7.8 5.66 10.33 53.98 28.43 59.86 30.0 51.71 83.01 46.55 67.08 89.65 68.43 79.49 34.27 46.39 41.81 39.03 33.37 33.43 31.83 31.58 32.86 33.83 34.93 28.58
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 12.93 0.17 3.93 0.34 10.57 14.33 9.18 13.84 22.2 16.4 19.26 0.8 1.32 0.02 2.85 1.71 2.46 0.56 0.26 0.67 0.5 0.73 1.53
27.85 42.65 18.68 18.97 32.34 13.21 69.84 34.1 46.25 25.16 353.96 107.45 356.24 117.53 205.54 484.11 188.66 332.68 412.56 369.65 367.52 132.56 171.67 86.93 181.47 83.77 84.34 74.01 106.1 116.49 95.61 83.75 105.71
0.82 1.07 0.55 0.67 1.13 2.63 1.24 3.98 3.32 8.23 125.73 41.92 66.95 37.89 86.05 124.28 74.12 124.99 133.82 110.83 126.37 29.96 29.13 16.61 63.49 59.7 65.15 75.51 72.83 77.43 67.28 72.48 57.12
0.15 0.48 0.04 0.07 0.05 0.02 2.58 0.01 0.0 0.05 2.97 2.82 3.41 3.12 3.17 2.62 3.4 2.3 3.2 2.7 2.96 2.39 3.02 3.28 2.31 2.35 2.44 3.63 4.02 4.23 4.14 4.09 4.19
0.39 1.67 0.21 0.19 0.1 0.32 3.71 0.16 0.33 0.02 35.36 6.76 24.22 7.8 21.79 54.87 29.81 33.19 71.68 65.2 66.08 7.32 12.03 10.39 15.28 12.41 11.91 6.96 7.79 10.68 11.14 11.44 10.5
2.58 1.88 1.43 1.18 2.0 1.06 5.0 1.95 2.26 2.08 9.25 10.69 9.82 8.21 10.98 12.48 10.26 7.0 13.6 9.21 12.17 6.35 10.53 3.02 8.79 10.96 11.41 15.03 14.59 12.4 18.41 14.06 13.87
0.26 0.03 0.03 0.03 0.1 0.0 1.85 0.19 0.17 0.1 5.63 2.84 5.15 3.05 2.33 5.53 3.29 2.7 7.31 7.28 7.09 2.53 3.33 3.83 2.24 1.94 2.38 3.44 3.33 4.21 3.27 2.7 3.39
1.23 1.6 1.22 1.84 2.23 1.8 6.53 1.17 0.82 1.2 31.05 9.24 26.85 9.02 13.94 27.08 19.82 23.77 36.04 29.07 32.1 8.48 10.97 9.84 11.12 11.16 12.72 15.87 18.07 18.06 17.58 16.61 17.9
0.17 0.16 0.17 0.21 0.44 0.47 1.7 0.17 0.13 0.11 10.5 4.3 5.65 5.06 6.82 12.03 9.37 13.69 17.17 15.48 17.63 4.24 2.93 2.86 6.69 4.64 5.48 2.29 2.39 2.49 1.93 2.02 2.65
1.15 1.06 1.0 1.85 1.74 1.54 1.46 1.93 2.41 3.57 39.39 4.27 24.64 2.16 4.04 29.08 33.21 31.01 53.0 29.77 37.49 2.05 6.85 3.93 19.17 15.92 16.14 4.13 5.92 7.0 3.57 4.42 9.3
0.44 0.77 0.09 0.3 0.23 0.15 3.8 0.2 0.1 0.21 75.59 10.84 38.93 11.85 53.42 68.75 53.7 60.89 96.72 108.36 98.75 6.62 16.75 4.65 32.41 24.33 23.24 2.68 3.16 5.37 4.33 5.91 2.22
0.02 0.03 0.2 0.17 0.18 0.13 0.47 0.05 0.04 0.0 6.52 1.1 1.39 2.11 3.65 8.98 5.52 5.88 7.54 10.42 11.73 1.38 1.01 1.33 2.53 2.82 2.7 1.86 2.19 2.24 1.52 1.45 3.22
0.42 0.49 0.29 0.62 0.21 0.04 4.28 0.62 0.22 0.67 14.48 5.37 8.52 7.25 15.69 21.01 15.14 14.19 25.0 29.25 22.85 5.36 10.56 1.95 8.29 11.57 10.61 7.38 8.93 12.02 9.8 9.59 11.71
3.96 6.28 2.21 3.11 3.04 3.58 13.05 3.08 2.92 5.27 14.23 15.35 13.67 9.26 12.69 15.55 15.51 11.9 17.85 20.22 19.56 8.97 16.13 12.02 12.08 14.58 13.05 18.46 20.14 18.73 19.41 21.65 18.74
7.68 8.93 4.35 5.76 6.57 12.31 1.84 4.72 15.27 11.45 94.85 8.33 31.81 22.7 18.48 138.78 39.18 118.45 42.59 74.52 46.29 21.13 25.78 7.23 34.18 12.36 13.0 6.25 2.69 5.62 9.09 10.37 13.61
6.81 5.05 3.52 2.04 1.37 1.98 8.68 1.14 0.98 1.56 124.63 12.15 163.0 11.13 58.8 161.35 97.37 121.74 148.15 131.16 135.92 20.17 25.15 12.18 78.4 28.69 40.21 4.33 5.78 10.68 6.89 8.23 10.5
0.75 0.73 0.84 0.74 0.8 0.92 7.25 0.52 0.5 1.44 105.88 31.56 107.18 26.18 48.85 102.1 62.53 102.62 130.97 127.93 129.4 21.35 20.98 28.33 59.65 44.88 46.04 30.33 40.03 45.21 42.96 45.74 41.95
6.88 6.64 5.56 5.14 6.04 4.93 8.4 6.54 5.83 6.65 30.26 12.46 29.12 12.62 24.27 32.26 25.09 32.86 39.82 32.44 41.01 14.05 16.66 14.86 19.47 13.02 14.3 24.65 24.29 25.41 25.1 22.79 25.1
5.43 4.05 3.34 3.28 3.97 3.79 8.7 3.96 3.44 3.17 41.74 10.74 15.69 10.44 31.14 44.13 25.14 38.04 52.48 52.89 57.24 9.49 12.1 5.46 18.21 18.32 19.07 13.32 15.47 17.21 15.85 18.04 18.81
0.85 0.66 0.62 0.47 0.51 0.6 2.69 0.37 0.62 0.21 13.47 2.72 10.64 6.53 4.64 13.45 9.85 15.03 16.26 12.92 14.65 3.93 5.0 5.48 6.89 5.34 5.67 7.17 8.18 7.59 5.94 6.51 8.52
3.07 2.62 1.25 1.01 1.06 1.27 6.7 0.69 0.9 1.34 34.9 9.24 14.74 9.05 11.49 41.99 20.96 34.9 44.21 38.04 42.59 7.93 15.89 8.33 11.91 16.4 15.97 17.83 21.19 22.78 18.44 17.82 22.29
1.33 1.16 1.17 1.06 1.45 1.24 2.04 1.22 1.57 0.54 9.61 2.48 8.05 2.11 3.03 9.18 8.35 11.95 12.97 12.09 12.79 3.0 3.2 2.9 4.33 4.85 5.61 7.14 8.73 7.7 8.16 8.48 7.23
0.69 0.5 0.48 0.59 0.49 0.26 11.11 0.11 0.22 0.17 16.71 12.49 15.65 13.22 16.34 35.24 10.76 20.56 24.36 26.24 22.85 13.8 12.52 13.15 11.74 5.19 5.82 11.13 15.13 14.41 11.24 10.47 13.95
1.09 1.16 0.94 0.8 1.13 1.33 6.25 0.68 0.62 0.48 14.77 10.5 14.05 7.05 14.08 17.53 13.18 16.16 18.4 18.27 19.61 8.3 11.33 10.11 11.84 9.16 10.39 12.48 15.06 17.39 14.8 14.44 16.33
9.96 10.08 8.82 7.55 9.87 17.8 25.62 10.66 10.31 11.48 93.21 29.22 33.09 29.28 80.04 65.93 43.77 118.68 117.94 133.05 130.64 26.06 28.6 33.22 40.83 26.69 31.33 22.38 25.53 29.61 24.64 25.73 32.67
0.0 0.0 0.0 0.02 0.0 0.0 0.15 0.0 0.0 0.0 3.33 0.53 1.29 0.74 0.87 8.24 1.77 5.53 1.72 5.93 3.44 0.97 1.7 0.54 2.46 0.21 0.24 0.2 0.05 0.05 0.22 0.49 0.44
1.04 1.29 0.94 1.02 0.9 0.09 25.02 0.45 0.24 0.27 37.89 26.19 26.56 23.78 27.54 37.91 27.16 29.4 44.78 43.43 42.34 22.82 30.74 15.3 25.69 15.66 16.27 23.34 27.52 32.19 23.86 20.87 25.18
9.09 7.32 6.77 8.37 7.58 14.3 9.14 8.99 10.42 12.56 120.67 32.2 85.69 24.62 52.48 80.46 72.56 147.8 126.77 129.97 135.12 21.39 28.34 26.13 74.61 61.8 68.05 40.4 49.21 50.89 55.64 62.36 51.55
2.24 2.84 1.76 1.6 1.46 3.15 1.49 3.56 3.9 4.62 16.45 4.49 11.98 3.34 6.94 14.01 10.66 19.35 16.0 15.75 18.32 3.26 4.74 3.24 11.27 4.85 5.64 2.51 2.9 3.53 2.45 2.59 3.88
0.47 0.58 0.44 0.25 0.5 0.21 6.28 0.06 0.23 0.0 5.82 4.49 6.87 7.22 4.83 6.29 7.38 4.67 10.97 8.02 8.27 5.66 7.58 4.85 4.23 5.35 5.72 6.45 9.75 8.72 7.41 5.8 8.04
1.53 1.32 1.44 1.3 2.1 1.41 14.41 2.28 2.54 1.99 25.23 23.56 24.05 20.06 22.11 33.69 16.77 27.68 32.3 36.53 33.02 12.96 15.85 23.35 14.45 9.9 10.52 16.21 21.19 23.99 16.21 18.28 24.64
0.82 0.85 0.35 0.56 0.56 0.17 4.24 0.88 0.25 0.41 21.95 5.35 16.86 3.62 19.01 23.76 17.3 24.45 32.3 32.67 32.6 7.06 8.86 3.87 6.84 9.96 11.77 9.34 12.77 14.5 10.86 11.31 12.85
0.0 0.06 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 4.79 0.14 2.49 0.38 2.4 4.69 3.59 5.83 5.36 5.06 5.83 0.1 0.33 0.02 2.26 0.14 0.25 0.61 0.4 0.46 0.43 0.51 0.42
0.31 0.13 0.16 0.61 0.47 0.96 3.71 0.05 0.14 0.2 69.48 21.34 52.46 14.52 46.9 102.03 65.66 83.19 136.07 110.02 142.19 23.69 11.57 17.37 41.42 17.5 21.12 0.04 0.59 0.19 0.15 0.2 0.42
7.13 6.62 4.56 4.91 8.21 9.7 13.14 5.3 9.3 7.22 184.91 26.74 187.35 17.57 55.65 208.86 96.74 181.62 240.97 162.17 199.36 21.93 21.64 36.8 72.92 34.41 41.27 16.57 17.58 23.25 17.62 19.72 18.01
0.78 0.73 0.75 0.91 0.72 0.44 4.37 0.02 0.74 0.25 3.48 4.89 6.64 7.73 2.79 6.07 5.93 5.48 7.99 5.89 6.96 4.86 7.43 5.27 4.77 5.27 5.17 6.3 7.79 6.56 5.46 4.1 7.01
0.39 0.31 1.11 1.39 2.03 2.32 2.19 0.28 0.42 0.58 481.42 30.39 354.39 34.03 123.56 623.2 319.33 444.11 562.08 483.96 468.48 9.95 38.98 34.57 214.96 67.26 80.24 10.23 7.56 11.0 11.34 12.08 14.16
5.24 4.28 4.26 3.22 4.01 4.14 21.37 3.24 3.26 2.93 41.69 25.47 48.36 23.88 18.62 59.9 37.67 45.46 61.46 43.92 54.85 24.22 34.16 27.1 35.54 29.02 28.64 31.39 35.36 34.18 31.71 33.6 39.18
9.14 8.45 7.71 4.94 8.08 5.02 15.61 13.76 15.36 11.91 307.73 40.49 298.44 37.53 141.65 467.23 207.99 306.18 425.16 332.76 355.03 41.52 100.16 70.14 90.44 67.15 76.79 74.68 86.86 102.18 84.23 85.48 93.64
5.59 5.31 2.51 1.81 2.48 1.45 9.12 1.79 2.17 1.66 34.76 15.83 33.39 20.68 29.48 43.48 24.35 35.94 45.46 43.92 42.71 18.46 25.89 24.38 17.67 20.57 21.07 26.13 32.43 32.29 28.57 24.78 30.53
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05 0.0 0.0 2.57 0.0 2.12 0.0 0.1 3.79 2.96 3.49 7.07 3.15 6.27 0.0 1.41 0.0 0.39 0.01 0.05 0.0 0.0 0.0 0.05 0.0 0.15
16.15 8.83 6.96 4.36 8.97 8.36 29.04 7.38 6.23 5.22 47.39 27.67 36.61 33.0 44.62 84.52 21.62 53.75 60.52 60.21 66.24 27.15 22.72 32.07 24.09 13.27 12.37 20.47 27.17 26.07 24.41 24.25 28.06
0.31 0.29 0.36 0.1 0.47 0.3 0.93 0.25 0.33 0.72 3.15 1.58 2.89 2.38 1.59 3.02 3.04 5.33 5.59 4.0 5.01 1.26 2.56 1.15 1.99 1.47 1.62 2.01 2.32 2.83 2.33 2.01 2.71
1.25 0.84 0.3 0.23 0.34 0.73 3.81 0.17 0.32 0.26 204.66 24.71 111.59 52.91 35.18 289.19 72.3 217.58 95.88 171.94 112.37 52.41 57.61 23.39 69.4 21.56 23.32 8.39 3.62 7.11 12.47 13.25 17.6
5.86 11.79 5.81 11.84 8.12 0.77 132.46 4.74 7.47 6.72 759.72 202.32 676.39 183.24 301.82 1178.04 323.85 602.87 900.47 764.28 732.74 194.84 223.75 223.39 260.39 69.97 77.53 209.78 321.15 377.59 244.16 236.0 364.91
0.1 0.04 0.09 0.01 0.12 0.13 8.91 0.14 0.04 0.0 19.7 17.16 21.25 14.25 29.7 18.55 16.28 15.23 36.23 44.64 35.5 14.1 21.33 14.98 17.08 11.45 10.21 17.97 15.78 21.38 16.43 18.93 21.66
4.31 3.41 2.93 4.67 4.67 4.21 10.33 6.45 4.42 3.56 18.79 16.71 17.89 10.44 24.1 17.71 20.15 26.27 28.69 29.63 23.97 14.25 20.45 13.21 20.67 13.1 14.3 18.5 21.32 22.93 18.85 20.03 22.5
0.41 0.4 0.11 0.08 0.14 0.47 0.89 0.1 0.33 0.17 2.87 1.22 2.64 1.78 0.62 3.02 1.94 2.78 5.12 4.54 3.63 1.67 0.84 1.31 1.45 0.97 1.06 1.68 1.9 2.23 1.62 1.38 2.08
1.06 1.82 1.15 1.09 1.04 0.84 5.2 0.79 0.81 0.34 10.62 5.75 15.33 5.5 10.55 13.56 13.49 11.21 17.06 16.42 16.3 9.33 11.37 11.74 6.05 10.54 10.84 16.39 16.83 17.25 17.51 17.55 17.93
3.17 2.27 2.27 1.36 1.45 2.17 4.52 2.15 1.37 1.69 15.39 4.94 15.71 5.33 5.91 15.97 10.38 14.55 20.02 15.84 17.29 5.37 9.32 6.82 7.83 5.3 6.41 8.38 11.72 12.27 9.59 9.85 10.33
1.07 0.64 0.62 0.5 0.36 0.93 11.16 1.12 0.46 0.13 13.1 12.63 13.71 8.97 13.74 20.94 12.87 19.4 20.49 14.0 20.96 8.37 13.55 11.01 10.14 6.54 7.69 11.81 14.07 15.04 11.56 13.0 18.04
24.92 13.09 28.99 26.77 43.03 19.34 149.1 14.45 10.78 10.74 358.09 131.54 430.0 129.82 191.34 497.08 327.53 356.9 496.2 369.4 435.62 134.47 209.01 213.6 177.31 185.07 175.81 111.51 105.58 113.63 124.57 148.56 122.44
2.67 2.46 0.72 1.08 0.85 1.1 9.24 0.65 0.85 1.89 66.6 18.69 56.97 16.58 27.71 74.59 47.63 72.74 105.06 94.79 96.2 19.56 20.65 21.22 26.77 30.53 33.07 49.81 54.51 53.36 52.91 50.29 64.26
0.99 1.37 0.2 0.25 0.45 0.37 4.7 0.32 0.29 0.28 19.94 5.13 37.4 8.04 9.08 21.95 18.05 18.99 28.14 23.21 25.05 7.65 9.74 5.03 14.57 6.07 8.16 4.05 5.67 7.72 5.89 5.64 5.66
1.33 0.68 0.86 0.39 0.73 1.29 1.01 5.3 1.64 4.95 31.25 3.34 29.63 0.84 8.53 43.03 21.06 34.55 38.83 40.28 36.23 5.11 2.12 2.64 35.83 2.44 2.29 2.01 1.81 1.38 1.62 2.45 3.9
2.76 2.11 1.66 1.75 1.76 1.9 9.46 1.27 1.6 3.1 39.52 15.42 21.85 12.65 30.88 43.88 27.63 58.37 55.12 61.04 63.81 10.49 12.3 18.96 13.26 13.84 18.22 13.65 15.06 17.18 14.02 13.69 19.47
4.51 4.01 4.17 2.12 3.54 3.5 16.55 2.81 3.72 4.59 230.28 42.42 285.87 43.22 138.16 333.52 158.18 246.58 368.89 265.47 305.53 43.57 67.9 48.3 99.54 84.34 87.63 68.57 82.02 115.79 87.38 86.25 107.83
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 4.62 0.36 2.74 0.53 1.35 2.73 3.35 4.6 5.52 5.28 8.01 0.04 0.24 0.02 2.34 0.27 0.33 0.64 0.7 0.36 0.44 0.7 0.51
2.76 2.23 4.79 5.11 8.36 7.47 13.2 4.87 3.75 3.07 61.92 26.86 36.57 15.43 39.26 40.39 47.16 68.7 56.88 50.37 67.23 22.5 18.36 29.13 34.67 40.49 40.66 56.73 55.59 68.14 52.15 61.66 69.15
3.23 2.74 1.36 1.89 1.47 1.1 4.33 1.21 1.23 1.1 23.87 4.37 12.34 4.99 20.35 22.16 15.3 21.52 29.11 22.92 24.7 5.36 6.72 3.58 8.88 11.83 12.16 11.81 13.42 14.6 12.69 12.13 13.59
17.97 19.56 14.56 15.5 14.87 32.37 24.14 18.9 17.7 22.77 272.17 60.64 224.99 45.52 159.89 226.98 206.38 296.84 373.33 282.54 367.43 45.68 62.65 46.91 123.71 91.89 102.5 98.69 118.81 163.81 125.23 138.4 147.23
3.43 2.46 1.93 1.28 2.57 0.34 38.87 0.5 0.61 0.93 123.77 46.98 70.53 56.18 121.75 174.43 103.49 124.69 178.5 186.97 174.52 33.35 43.88 33.2 55.67 57.33 61.57 51.21 62.9 66.98 64.15 65.51 64.16
0.0 0.13 0.02 0.11 0.07 0.19 2.73 0.0 0.13 0.0 16.07 4.37 15.53 10.56 4.16 20.98 7.96 13.21 23.33 21.48 21.72 5.21 5.36 4.03 5.49 3.09 3.47 4.57 6.02 6.26 5.2 5.98 4.75
4.57 2.02 3.51 1.48 2.38 1.45 5.37 2.78 1.38 2.31 56.93 14.08 101.34 13.73 35.85 98.37 45.04 63.77 63.1 59.16 59.51 16.98 17.1 17.78 50.52 26.8 28.6 9.53 10.11 14.77 11.5 14.17 12.82
0.05 0.11 0.17 0.11 0.1 0.47 2.98 0.28 0.0 0.0 21.8 5.18 19.35 6.24 9.01 36.37 17.7 20.89 31.41 24.42 28.59 4.92 6.3 5.38 9.99 6.75 8.0 4.17 6.26 6.2 5.13 5.35 6.71
20.27 15.13 17.62 10.62 17.04 18.54 26.29 26.5 22.74 16.6 257.56 51.66 303.07 67.45 182.11 258.43 226.31 261.93 300.06 291.96 316.0 67.79 88.77 64.28 142.41 117.55 139.34 38.12 47.07 59.98 44.86 48.64 68.0
0.0 0.18 0.02 0.15 0.01 0.0 37.42 0.0 0.09 0.0 42.82 42.13 43.49 29.04 45.85 60.78 52.66 51.09 79.31 78.88 70.97 29.14 51.33 51.84 29.09 23.04 24.99 36.98 38.03 54.04 37.52 41.78 58.63

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)