Heatmap: Cluster_264 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
1.96 0.42 0.04 -3.42 0.71 5.22 -6.82 -3.43 0.32 -6.05 -4.27 - -3.19 -1.63 - - -2.41 -3.4 -0.75 -3.65 - - - -6.82 - - - - - - - - - - - - - - - - - - - -3.46 -4.21 -0.86 - - -1.67
-3.72 -1.13 1.16 0.61 -2.61 5.36 -3.72 -3.88 -4.48 - -8.3 - - 1.45 - - - - - - -6.51 - - - - -3.95 - - - - - -4.58 - -3.26 -3.59 - - - - - - - -5.09 - - - -3.14 - -
-3.67 0.32 - -0.93 1.94 5.33 -2.45 -5.03 - -5.27 -7.47 - -1.08 - - - - - - -4.89 -4.28 - -4.28 -4.79 -0.63 -0.96 -1.97 - - - -2.09 -2.73 - - -1.48 - - - - - - - -4.5 -4.1 - - - - -
- -1.97 - -2.34 - 5.37 - - - - - - -0.58 0.34 - - - -2.49 - -0.41 - - -2.1 - - - - - - - - - - - 1.75 - - - - -3.08 -3.4 - -2.12 -2.15 - - - - -
1.28 2.81 -2.78 -2.64 0.5 5.03 - - -2.34 -2.73 -2.12 - - - - - -0.86 -6.07 - - - -3.13 - - - - - - - -0.03 - -2.18 - - - 0.72 - - - - - - - -1.22 -0.52 - - - -
-0.61 1.63 1.44 2.34 0.19 4.57 0.34 0.65 0.12 -1.7 -1.38 -1.32 - 1.44 1.38 - -1.59 -4.22 - -3.6 - -4.64 - - - - 0.1 - - - - -1.07 - - - - - - - - - - - -3.0 - - - - -
-0.34 3.39 -4.22 - -1.24 4.75 -5.28 -5.27 1.16 - -4.23 -4.2 -2.39 2.19 -0.94 - -2.36 0.39 - -4.67 -2.57 - -5.22 -4.56 - - - -2.06 -2.11 - - -2.97 - - - - -1.94 - - -5.14 - -4.68 - - - - - - -
-1.21 1.34 -0.52 0.95 - 5.34 - - - - -3.82 - - 0.63 - - - - - -1.68 - - - - - - - - - - - - - - - - - - - - -1.5 - - -0.68 - - - - -
-4.76 0.12 -4.49 0.29 1.3 5.36 -4.09 -4.67 -0.65 -3.53 -3.11 -0.39 -1.76 -3.84 - - - -7.96 - -8.45 - -5.63 - -5.28 -1.17 - - - - - - -2.79 - - - - - - -2.64 - - -5.39 - -3.79 - - - - -
0.8 1.23 -0.52 - -1.35 4.5 - - - -0.76 -1.61 0.47 -1.47 -2.0 1.54 - - -1.62 - -4.62 -1.18 -1.3 -0.81 -0.22 1.62 - - -0.39 0.32 -0.64 -0.9 -1.54 - - -0.55 -0.65 - 0.57 -0.8 -2.84 -0.38 -1.08 -0.47 -2.21 - - - -1.11 -
- 0.45 - - 1.75 5.26 - - - 0.23 0.44 -1.15 - - - - - - - -2.44 - - -3.35 - - - - - - - - 0.46 - - - - - - - -2.2 -3.14 - -4.07 -0.08 - - - - -
- 2.62 - -1.25 1.66 4.91 - - - - -3.72 - - - - - - - - - -1.74 - -3.04 -1.8 - - - - - - - -0.12 - - - - 0.71 0.57 - - - -0.73 -0.8 -0.3 - 1.31 - - -
-2.21 1.82 -2.87 0.27 -0.76 5.15 -1.19 -3.93 -0.84 -0.64 -4.6 -1.77 -3.05 - - - -4.13 -2.4 - -5.75 -5.17 -2.11 - -3.35 - 1.19 - -1.71 - - - -1.31 - - -0.64 - - - - -3.5 -5.47 - - -1.05 -2.02 -0.58 - - -
-4.8 1.4 1.48 1.95 0.7 4.75 -0.87 0.0 - - -4.52 - -1.79 2.98 - - -5.31 -3.49 - - - - - -5.32 - - -2.1 - - - - -2.86 - - - - -2.03 - - -2.7 - - -3.1 - - -1.13 - - -
- 2.82 0.33 1.18 1.92 5.09 - -0.66 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.08 2.83 -3.0 -1.21 - 4.88 - -4.14 1.63 - -4.08 - -1.78 - - 1.21 - -2.32 - -3.17 - -4.66 - -3.23 1.31 - - - - - - -2.85 - - - - -0.02 - - - - - - -1.38 - - -1.04 - -
-4.24 0.58 1.52 -3.27 1.12 5.4 - - -2.81 - - - - - - - - - - - - - - -4.12 - - - - - - - - - - - - - - - - - - - - - - - - -
-1.33 0.95 -2.23 -0.74 0.03 5.09 -1.35 -0.26 -2.45 -2.03 -3.3 -4.46 -1.14 -1.05 - - 0.45 -2.65 - -4.37 -2.05 - -6.53 - -1.67 - - -1.73 - -1.73 -1.42 -0.26 -1.61 -2.44 -2.52 -2.88 -1.74 -2.33 -0.82 -2.71 -2.43 -1.8 -1.36 -1.36 - - -1.23 -1.85 -3.25
-0.75 1.15 -3.33 0.84 1.48 5.01 0.44 0.47 -0.99 -5.34 -2.08 -3.5 -2.8 -0.04 -0.72 - -2.15 -0.64 - -1.81 -3.66 - -4.59 -1.83 - -1.23 - - - -1.64 - -2.22 - - - -1.91 -1.77 - - - -5.54 -3.72 -4.21 -2.26 - -2.17 - -2.37 -
0.18 2.0 - -0.2 1.27 5.18 -0.59 - - - - - - - - - - - - - - - -3.17 -2.18 - - - - - - - - - - - - - - - - - - - - - 0.82 - - 0.65
-6.76 0.69 -4.46 -3.35 -2.53 5.49 - - - - -9.54 - - -1.61 - - - -28.2 - -4.65 - - -4.18 - - - - - - -4.47 - - - -1.02 - - -1.4 - -2.37 -3.61 -3.04 -3.12 -2.32 -7.14 - - - - -
-1.74 3.44 - - 3.45 4.75 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.84 1.98 1.19 -2.99 0.61 4.83 -0.53 -3.75 0.8 -2.73 -2.59 -3.68 -0.37 -0.5 - - -0.11 -1.36 - -1.22 -4.8 - - - - - -1.76 - - - - - -1.49 - - - - - - - - -4.06 -2.71 -0.03 -2.15 - - - -0.34
-0.58 2.98 - - - 5.16 - - -0.07 - - - - 1.34 - - - - - - - - - - - - - - - - - -1.39 - - - - - - - - - - - - - - - -0.11 -
-0.63 1.46 -2.47 -0.64 2.38 5.18 - - - - -2.16 -1.7 - -1.63 - - -3.06 -3.43 - - - - -2.39 - - - - - - - - 0.92 - - - - - - - - - - - -3.5 - - - - -
-1.01 2.11 - - 1.41 5.3 - - - - -3.01 - - - - - - - - -6.25 - -3.07 - -2.48 - - - - - - - - - - - 0.76 - - - - - - - - - - - - -
-0.12 2.79 -0.9 1.06 0.75 4.99 -2.56 -2.55 - - -3.69 -1.48 -0.34 - - - -2.75 -1.89 - -0.16 - - - - - - - - - - - - - - - - - - - - - - - 0.27 0.03 - - - -
-0.89 3.02 - 1.38 - 4.67 -1.24 -1.23 1.16 - - - - - - - 0.6 -2.1 - - - - - - - 2.89 - - - - - - - - - - - - - - - - - - - - - - -
-3.92 3.05 - - - 4.79 -1.28 - - -2.52 -1.8 - - - - - - -1.97 - -3.23 - - - - - - - - - - - - - - - - - - - -2.02 - - -1.74 1.92 - - 2.18 1.55 -
-4.26 0.66 -1.37 - 1.47 4.89 - - 1.34 - -2.37 -1.9 - - - - -1.66 -6.09 - - -0.83 - -1.21 -4.18 - - -0.52 -0.3 -0.35 -0.05 - -0.63 - - 0.04 - -0.38 - 0.23 -0.84 -0.27 -1.61 -0.19 - -0.55 - - - -
- 2.03 - - 1.86 5.04 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.08 - - - - - - - - - - -
-2.21 -1.37 -1.01 - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.03 1.59 -2.95 -0.87 1.04 5.19 -2.92 - -1.0 -1.95 -1.87 -2.15 -1.03 -0.71 - - -1.82 -2.87 - -3.69 -4.75 - - - - - - - - - - - - - - - - - - - - - -3.63 -2.03 - - 1.23 - -
0.42 3.65 - -0.09 - 4.97 0.87 - - - -0.47 - - - - - -2.75 - - -5.25 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.79 3.29 - - 3.04 4.78 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.63 2.61 - -0.67 2.83 4.92 -0.54 0.78 - - -4.03 0.11 - - - - - - - - - - - - - - - - - - - -0.24 - - - - - - - - - - - -2.23 - - - - -
-0.86 0.97 -4.99 1.65 -0.36 4.58 -0.37 0.49 -1.22 - -1.32 -3.24 -0.3 -0.94 - -0.53 -5.06 -0.56 - 0.22 -4.39 -5.12 - -3.28 2.18 -0.34 0.18 - - - - - - - - - - - - - -5.29 - -4.15 0.72 0.37 0.98 - - -
-0.48 2.51 - -3.45 -0.69 4.16 1.29 0.03 - 1.55 -1.45 -1.28 - -2.25 - - 0.46 -1.65 - -2.18 -4.38 -3.37 - -5.18 -0.14 - - - - - - -2.34 - - - - - - - - - - -3.12 1.67 2.25 1.08 0.64 0.18 -0.82
-2.15 3.0 - - 1.05 4.71 - - 1.93 - - - - - - - - -0.06 - - - - -1.98 - - - - - - 2.02 - - - - - - 1.69 - - - -2.06 - - - - - - - -
-0.09 1.79 -2.48 -2.85 0.54 4.32 2.25 2.65 -3.11 -4.77 -2.44 -2.91 -1.64 2.26 - - 0.14 0.57 - -1.1 -3.85 -4.72 - - - - -1.47 - - - - -1.64 - - - - - - - - -4.17 - - -0.59 -0.0 - -0.6 - -
-3.01 1.48 -1.28 0.59 0.24 5.14 - - 0.28 -2.58 -2.78 - - - - - -1.39 - - - - - - - 2.06 - - - - - - -1.04 - - - - - - - - - - - - - - - 0.24 -
-1.13 0.95 -0.79 0.31 0.23 4.68 -1.65 -0.99 -1.88 -2.14 -1.9 -0.92 0.22 3.12 -1.32 -0.71 -2.78 -0.53 - -1.42 -3.39 -6.36 -5.33 -5.55 -3.27 -1.48 -1.47 -3.23 -3.89 - - -3.57 - -4.05 - - - - - -6.16 - -3.87 -5.61 -0.35 -0.39 -0.96 -1.79 -3.95 -
-0.49 0.07 -0.69 -1.71 -0.21 4.51 -2.11 -2.25 -0.2 -3.24 -1.81 1.33 -2.37 -1.11 -2.64 - -2.74 -1.34 - -2.31 -1.33 -2.92 -2.23 -1.35 -0.23 -4.21 - -2.06 -0.15 -0.24 0.15 -0.36 -0.83 - -2.05 -2.79 -1.78 -0.57 -1.89 -0.89 -2.03 -0.67 -1.1 0.16 0.57 0.34 0.66 0.52 -3.19
-3.71 0.27 -2.09 - -1.36 5.53 - - -1.04 - -2.86 - - - - - - - - - - - - -3.66 - - - - - - - -2.35 - - - - - - - - -4.18 - - - - - - - -
0.42 2.02 - -0.79 -0.09 4.78 - -4.07 - -4.32 -2.43 -1.37 - -1.68 - - -0.32 -2.75 1.99 -2.76 -4.3 -2.28 -3.68 -2.31 0.33 - - - -0.91 0.12 - - - - - - - -1.09 - - -3.08 -3.48 -2.47 1.4 -1.07 -1.49 -0.97 -1.5 -
-0.63 2.12 -4.37 -1.7 -0.08 4.55 -3.96 -0.51 -4.35 -2.08 -1.68 -3.24 -1.32 1.04 - -1.22 -5.66 0.11 - 0.48 -1.67 -1.45 -0.29 -2.37 - -0.42 0.01 -0.59 -1.83 -0.35 -1.67 0.5 - - - -0.43 -2.49 -0.63 -0.19 -2.72 -2.78 -2.29 -2.68 -4.28 - -0.43 -1.68 -0.3 -1.21
-2.53 2.83 - - - 5.24 - - - - -5.73 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.98 - -
-5.82 0.2 -0.95 -0.11 -0.52 4.05 0.7 1.31 -3.35 -1.99 -4.14 - 0.95 3.89 - - -4.11 1.21 - 1.0 - 0.23 -4.89 -5.5 -1.8 - - - - - - -4.0 - - - - - - - - - - - 0.87 - - - - -
-1.42 2.51 - 0.13 1.03 5.26 - - 0.41 - -3.21 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.54 3.19 -0.1 - - 4.99 - - -0.54 - - - - 0.03 - - - - - - - - -2.49 -1.97 - 1.32 - - - - - - - - - - - - - -0.79 - - - - 0.79 - - - -
-1.81 2.97 - 1.57 0.13 4.98 - -2.62 1.48 - -2.69 - - - - - - - - -6.35 - - - - 0.78 - - - - - - - - - - - - - - - - - - -1.56 - - - - -
-2.81 -0.58 - -1.14 0.21 5.14 -4.66 -2.59 1.27 -5.9 -3.65 -2.4 - -1.83 - - -4.92 -3.46 2.73 -2.09 - - - -4.07 - - -0.61 - - - - -4.36 - - - - - - - - - - - -4.31 - - -1.91 - -
-6.14 0.72 -3.18 0.04 -0.39 5.49 - -2.44 - - -6.9 - - - - - - - - - -3.68 -3.83 -4.92 - - - - - - - - -2.15 - - - - - - - - - - - - - - - - -
- 3.76 - - - 5.15 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.98 3.26 -1.49 -1.6 - 4.8 - - - -0.83 -3.1 -0.17 - -0.96 - - - -2.56 - -3.06 - -3.18 -3.48 -1.22 - - 0.26 - - - - -0.5 - - - - - 0.94 - - - -2.36 -2.26 0.09 - - 0.3 -0.22 -
-0.77 1.19 -2.15 2.35 -0.3 4.74 0.36 0.07 -2.56 -3.25 -0.62 - -0.32 -0.64 - - 2.28 -0.76 - -2.58 -4.1 - -5.52 - - - - -2.97 - - - -4.88 - - - - - - -3.15 -5.46 -5.38 - -5.61 -0.5 - - -1.72 -0.93 -0.04
-0.41 0.8 -0.85 -0.42 0.27 5.18 -2.98 -2.27 -1.64 -1.97 -0.13 - -1.82 1.66 - -0.17 -4.76 -5.3 - -4.69 -3.34 - - -3.39 - - - - -1.77 -2.36 - -1.77 - - - - - - - -3.5 -2.11 -4.71 -3.32 -5.59 - - - - -2.74
-1.93 3.54 - - - 5.21 - - - - -2.76 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-6.07 1.11 -4.68 -1.49 -0.47 4.05 - - 0.6 - -4.25 0.82 2.14 3.33 - - -3.62 1.73 - -4.24 -1.41 -1.09 -1.67 -2.96 - - - -1.31 -2.32 -2.43 -1.75 -1.91 -1.64 -3.68 -1.63 -0.93 -0.36 -0.54 -1.48 -4.2 -2.89 -1.84 -3.38 -6.06 - -5.15 -1.51 -0.72 -0.62
- 3.46 0.09 1.07 2.48 4.71 - - - - - 0.69 - - - - -0.14 - - - - - - -0.97 - - - - - - - - - - - - - - - - - - - - - - - - -
-2.08 2.41 - 1.6 - 5.12 - -2.19 0.23 - - - - 1.17 - - - - - - - -0.66 - - - - - - - - - 0.5 - - - - - - - - - - - - - - - - -
-3.07 1.71 -2.49 -1.61 0.67 4.79 - - -1.62 - -3.68 - - - 1.14 1.72 - - - -7.97 -1.76 -2.72 -1.44 -1.55 - -1.17 0.77 - - -1.04 0.28 - 1.54 - -0.95 -1.05 - - - -4.62 -1.62 -3.65 -0.67 -5.32 - - - - -
0.34 3.12 - -0.86 - 4.93 -1.94 - -0.53 - -1.95 - - - - - -1.53 - - - - -2.69 - - - - - - - - - - - - - - - - - -2.19 -1.59 -1.5 - -1.96 - 0.56 - 1.89 -
0.74 -0.36 -1.52 0.16 1.87 4.37 -0.37 -0.01 0.24 -1.56 -1.24 0.27 -0.34 -0.73 -1.98 -1.77 0.61 -0.86 -0.54 -1.14 -1.97 -1.73 -1.88 -1.73 0.02 -1.64 -2.08 -1.53 -2.07 -1.91 -2.32 -1.95 -2.12 -2.18 -1.9 -1.68 -1.64 -2.07 -2.48 -2.7 -2.22 -2.14 -1.78 -0.64 0.44 -0.33 -1.03 -1.37 -1.6
-5.46 -1.29 -1.94 1.73 1.86 5.25 -0.76 -0.16 -2.25 - -4.01 -2.18 -2.99 -1.84 - - -4.12 -3.4 - -4.11 -5.92 -3.52 - - - - - - - - - - - - - - - - - -2.94 -5.4 - - -2.34 - - -1.95 - -
-3.17 -1.01 1.52 1.06 -0.48 5.26 -0.88 -0.66 0.66 - -3.58 - - -3.13 - -1.98 -2.12 -1.59 - -8.48 - -5.43 - -5.05 - - - - - - - -3.03 - - - - - - - - - -5.38 - -4.44 - - -1.94 - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.