Heatmap: Cluster_256 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00002p00177010 (evm_27.TU.AmTr_v1.0_scaffold00002.151)
0.09 0.72 - -0.83 0.9 - -3.37 -6.46 -2.93 -2.42 0.41 0.35 0.77 0.49 0.94 -0.07 1.07 0.13 -0.25 0.5 -0.79 0.87
AMTR_s00002p00262170 (evm_27.TU.AmTr_v1.0_scaffold00002.458)
-0.06 -0.34 0.26 -0.78 1.23 -3.13 -3.21 -2.85 -2.76 -2.51 0.43 0.81 0.37 0.11 0.69 -0.07 0.31 0.36 0.73 0.61 -1.24 0.37
AMTR_s00002p00271450 (evm_27.TU.AmTr_v1.0_scaffold00002.625)
-3.74 -0.07 0.47 -1.46 0.96 -5.58 -1.65 -2.42 -2.07 -1.92 0.8 1.49 0.98 0.09 -0.01 -0.31 0.62 0.76 0.35 -0.15 -1.13 0.0
AMTR_s00005p00215940 (evm_27.TU.AmTr_v1.0_scaffold00005.94)
-0.35 0.52 -0.18 -1.1 0.74 -2.03 -1.72 -1.46 -2.2 -1.99 0.62 0.26 0.96 0.6 0.6 0.22 -0.01 -0.15 0.17 0.41 -0.51 0.54
AMTR_s00006p00022050 (evm_27.TU.AmTr_v1.0_scaffold00006.1)
- - - -2.67 0.78 - -1.56 - -1.15 -0.61 1.48 2.2 0.76 0.02 -0.38 0.47 0.96 -0.16 -1.23 0.16 0.27 -0.24
AMTR_s00008p00264310 (evm_27.TU.AmTr_v1.0_scaffold00008.222)
-6.8 -1.36 1.41 -1.84 0.64 -6.64 -1.22 -1.41 -2.37 -1.94 1.06 0.97 0.96 -0.3 -0.74 -0.09 1.04 0.46 0.1 -0.34 0.03 0.25
AMTR_s00009p00214490 (evm_27.TU.AmTr_v1.0_scaffold00009.148)
-1.21 1.01 0.41 -2.68 1.24 -6.14 -6.55 -8.77 -6.55 -6.29 0.56 0.5 0.93 0.95 0.34 0.62 0.23 -0.3 -0.2 -0.58 -1.01 1.08
AMTR_s00010p00064690 (evm_27.TU.AmTr_v1.0_scaffold00010.34)
-2.28 -3.01 -3.15 -0.93 0.81 -3.33 -3.31 -4.4 -2.71 -2.77 0.96 1.22 0.85 1.07 -0.37 1.5 0.29 0.48 -0.49 -0.49 0.57 0.52
AMTR_s00010p00234370 (evm_27.TU.AmTr_v1.0_scaffold00010.276)
-3.18 - -0.86 -8.99 1.95 - -2.23 -3.35 -2.02 -2.67 0.04 0.03 0.56 2.42 -0.01 0.4 -0.65 0.86 0.19 -0.69 -0.32 -0.83
AMTR_s00011p00124810 (evm_27.TU.AmTr_v1.0_scaffold00011.36)
- -1.31 - -1.15 0.56 - -0.64 - -1.2 -0.8 1.23 0.89 1.15 0.41 -1.02 0.5 1.12 -0.21 0.58 -0.32 0.61 0.61
AMTR_s00011p00198170 (evm_27.TU.AmTr_v1.0_scaffold00011.65)
0.34 0.81 0.37 -0.72 0.58 -1.47 -1.68 -2.76 -2.45 -2.26 0.65 0.38 0.83 0.35 0.4 0.17 0.65 -0.18 -0.22 -0.06 -1.52 0.47
AMTR_s00012p00203130 (evm_27.TU.AmTr_v1.0_scaffold00012.137)
-0.0 0.05 -2.28 -0.86 1.08 - -1.66 - -2.18 -1.96 -0.0 0.78 0.83 0.5 0.86 -0.6 0.87 -0.23 0.13 0.07 0.41 0.83
AMTR_s00014p00255630 (evm_27.TU.AmTr_v1.0_scaffold00014.145)
-0.13 -0.47 0.98 -0.98 0.58 -2.12 -1.15 -2.56 -1.51 -1.37 0.93 0.82 0.36 -0.41 -0.85 -0.02 1.05 0.19 0.03 0.12 -0.19 0.44
AMTR_s00017p00176770 (evm_27.TU.AmTr_v1.0_scaffold00017.88)
- 0.43 0.03 -0.81 1.03 -2.75 -1.53 -7.92 -0.9 -1.38 1.25 0.64 -0.15 -0.03 -0.06 -0.36 0.84 0.5 0.48 -0.27 0.95 -0.51
AMTR_s00018p00091190 (evm_27.TU.AmTr_v1.0_scaffold00018.40)
0.01 0.19 -0.67 - 1.29 -5.96 -6.12 - - - 0.29 0.76 0.59 1.22 0.54 -0.32 0.61 0.83 0.68 0.2 0.09 -0.67
AMTR_s00021p00045870 (evm_27.TU.AmTr_v1.0_scaffold00021.18)
0.34 0.52 0.04 -1.64 0.71 -1.95 -0.88 -1.28 -0.9 -1.03 0.28 0.49 0.41 0.71 0.43 -0.03 0.44 -0.16 0.01 -0.01 -0.73 0.38
AMTR_s00021p00246450 (evm_27.TU.AmTr_v1.0_scaffold00021.268)
-2.92 0.75 -0.92 -2.32 1.04 -0.92 -2.0 -4.25 -1.61 -1.89 1.28 0.95 0.46 0.39 -0.29 0.46 -0.31 0.76 0.71 -0.18 -0.06 -0.4
AMTR_s00022p00212550 (evm_27.TU.AmTr_v1.0_scaffold00022.250)
-1.22 -0.21 -0.77 -0.37 0.27 -6.57 -5.04 -2.79 -5.71 -6.0 1.02 1.29 0.75 1.06 1.36 0.37 -0.51 0.32 0.76 -0.39 -1.02 -0.12
AMTR_s00023p00200320 (evm_27.TU.AmTr_v1.0_scaffold00023.138)
0.23 0.09 0.65 -0.93 0.16 -2.0 -1.25 -2.87 -1.51 -1.47 0.46 0.91 0.43 0.54 0.35 0.49 0.01 0.3 0.33 -0.07 -0.41 0.13
AMTR_s00025p00137570 (evm_27.TU.AmTr_v1.0_scaffold00025.143)
-1.3 0.04 - -0.86 0.7 - -1.03 -2.53 -0.63 -0.63 1.1 0.99 1.19 0.86 -0.11 -0.85 0.39 0.25 0.38 0.07 -0.43 0.18
AMTR_s00026p00134280 (evm_27.TU.AmTr_v1.0_scaffold00026.61)
-7.09 - 1.22 -4.56 0.82 - -0.68 - -0.96 -1.27 1.05 1.08 0.58 0.58 0.23 0.13 0.41 0.36 0.72 -0.43 0.15 -0.37
AMTR_s00029p00228490 (evm_27.TU.AmTr_v1.0_scaffold00029.359)
0.08 -2.02 -0.57 -1.14 0.2 - -1.78 -3.47 -1.94 -1.91 0.91 0.51 1.23 0.66 0.8 0.26 0.22 0.33 0.46 0.33 -0.41 0.61
AMTR_s00036p00199540 (evm_27.TU.AmTr_v1.0_scaffold00036.111)
-4.46 -0.05 0.06 -1.42 1.31 - -2.04 -8.0 -1.53 -1.63 0.28 0.41 1.22 0.81 0.88 -0.45 1.01 0.04 -0.56 0.25 -1.28 0.74
AMTR_s00041p00097340 (evm_27.TU.AmTr_v1.0_scaffold00041.64)
-0.53 0.23 0.21 -2.21 0.28 -5.13 -1.02 -4.18 -0.4 -0.8 1.33 1.02 0.44 0.5 0.02 -0.05 -0.3 0.71 0.45 -0.31 -0.49 0.03
AMTR_s00044p00083840 (evm_27.TU.AmTr_v1.0_scaffold00044.54)
- 0.18 1.28 -6.45 0.04 -3.1 -0.02 -4.69 -0.45 -0.37 0.62 0.56 0.2 -0.2 -1.13 0.48 0.94 0.87 0.6 -0.07 -0.12 -0.5
AMTR_s00045p00137520 (evm_27.TU.AmTr_v1.0_scaffold00045.140)
-0.71 -0.74 -0.82 -0.64 1.06 0.48 -2.01 -1.3 -2.07 -1.91 1.04 0.79 0.41 -0.32 -0.93 -0.28 0.78 0.68 1.0 0.02 -0.96 -0.26
AMTR_s00045p00163010 (evm_27.TU.AmTr_v1.0_scaffold00045.187)
0.54 - - -5.22 1.1 - -3.12 -8.36 -1.56 -1.8 0.35 0.68 1.18 1.56 0.86 -1.53 0.47 0.03 0.23 -0.11 -0.15 0.96
AMTR_s00049p00095740 (evm_27.TU.AmTr_v1.0_scaffold00049.65)
0.3 -0.41 -0.3 -5.06 1.01 -7.84 -1.75 -5.6 -1.49 -1.49 0.4 0.62 0.41 -0.0 0.36 0.67 0.73 0.52 0.37 0.17 0.5 0.19
AMTR_s00056p00082470 (evm_27.TU.AmTr_v1.0_scaffold00056.59)
-5.91 0.52 1.35 -1.93 0.98 -4.77 -2.11 -7.05 -2.36 -2.08 1.38 1.19 -0.11 0.23 -0.95 0.16 0.91 0.45 -0.04 -0.99 -1.19 0.34
AMTR_s00057p00058340 (evm_27.TU.AmTr_v1.0_scaffold00057.34)
0.4 -0.08 0.5 -0.72 1.01 -3.6 -2.97 -2.08 -2.21 -1.92 0.29 0.23 0.88 0.62 0.43 0.35 0.75 0.07 -0.05 -0.18 -0.29 -0.01
AMTR_s00057p00172490 (evm_27.TU.AmTr_v1.0_scaffold00057.179)
-0.39 -0.07 -0.34 -1.92 1.04 -4.28 -2.25 -2.98 -2.89 -2.81 1.35 1.0 0.35 -0.57 -1.41 0.31 0.25 1.08 1.27 0.32 -0.49 -0.43
AMTR_s00058p00042580 (evm_27.TU.AmTr_v1.0_scaffold00058.14)
0.43 - 0.97 -1.89 1.0 - -2.31 - -2.73 -1.94 0.6 1.27 0.68 -0.17 -0.33 0.43 0.63 0.19 0.77 0.35 -1.4 0.28
AMTR_s00059p00105020 (evm_27.TU.AmTr_v1.0_scaffold00059.79)
-0.65 -1.08 - -1.4 1.14 -3.94 -1.23 -2.84 -1.89 -1.37 1.52 1.16 0.98 0.62 -0.46 -0.06 0.42 0.24 0.9 -0.1 -0.99 -0.14
AMTR_s00059p00166980 (evm_27.TU.AmTr_v1.0_scaffold00059.158)
-0.0 -3.33 1.4 -2.09 0.92 -4.61 -2.66 - -3.08 -3.18 1.2 0.93 0.37 -0.32 -0.7 -0.23 0.89 1.31 0.53 -0.84 -0.66 -0.04
AMTR_s00060p00165500 (evm_27.TU.AmTr_v1.0_scaffold00060.104)
1.17 -0.23 0.77 -1.88 -0.41 -5.91 -1.49 -3.65 -1.39 -1.13 0.71 0.73 0.74 0.51 0.4 0.05 0.03 -0.01 0.18 0.17 -0.72 0.32
AMTR_s00062p00113860 (evm_27.TU.AmTr_v1.0_scaffold00062.94)
-3.54 -8.84 0.88 -6.87 1.11 -3.32 -0.99 -7.39 -1.05 -1.0 0.95 1.55 0.71 0.72 0.29 0.05 0.49 0.04 -0.06 -0.78 -0.42 0.26
AMTR_s00062p00201350 (evm_27.TU.AmTr_v1.0_scaffold00062.211)
-0.5 0.05 0.84 -2.66 0.7 -1.06 -0.82 -0.52 -1.27 -1.29 0.68 0.91 0.59 -0.05 -0.68 0.09 0.61 0.37 0.4 -0.09 -1.15 -0.12
AMTR_s00079p00183520 (evm_27.TU.AmTr_v1.0_scaffold00079.104)
-2.28 -2.03 -1.78 -6.29 0.84 -7.76 -7.4 -8.9 -7.61 -7.18 1.69 2.48 0.57 0.64 0.49 -3.67 1.4 -0.1 -0.69 -0.04 -1.97 -0.58
AMTR_s00085p00061230 (evm_27.TU.AmTr_v1.0_scaffold00085.27)
-1.6 0.3 -0.48 -1.3 0.63 -6.53 -2.54 -0.79 -2.39 -2.16 1.43 0.86 0.34 -0.23 -0.78 0.88 0.64 0.61 0.92 -0.75 -0.14 0.08
AMTR_s00085p00136920 (evm_27.TU.AmTr_v1.0_scaffold00085.87)
0.54 0.29 -2.38 -4.0 0.73 -1.71 -3.34 -10.3 -2.22 -2.51 1.11 0.88 0.29 0.52 0.49 0.18 0.29 0.53 0.71 -0.43 0.62 -0.24
AMTR_s00101p00031340 (evm_27.TU.AmTr_v1.0_scaffold00101.7)
0.53 -1.8 0.82 -1.9 0.25 -3.74 -0.99 -2.02 -0.66 -0.67 0.35 0.47 0.62 0.41 0.33 0.27 0.1 0.5 0.38 -0.0 -0.23 0.42
AMTR_s00101p00081600 (evm_27.TU.AmTr_v1.0_scaffold00101.59)
-1.37 0.45 0.79 -1.18 0.71 -5.63 -0.38 -9.67 -0.65 -0.85 0.64 0.73 0.34 0.16 -0.58 0.25 0.9 0.57 0.39 0.01 -0.7 -0.49
AMTR_s00103p00029870 (evm_27.TU.AmTr_v1.0_scaffold00103.12)
- - - -1.41 1.93 - -8.51 -6.48 -6.32 -5.48 0.55 0.45 1.08 1.91 0.7 -0.11 0.32 0.52 0.27 0.53 -1.22 -0.36
AMTR_s00126p00079310 (evm_27.TU.AmTr_v1.0_scaffold00126.36)
-1.01 -0.37 1.27 -0.6 0.1 -6.09 -6.0 - -4.86 -3.41 0.66 0.94 1.23 0.91 0.89 -0.11 0.02 0.24 0.36 -0.27 -1.87 0.43
AMTR_s00133p00094810 (evm_27.TU.AmTr_v1.0_scaffold00133.41)
0.39 -2.79 0.49 -3.63 0.67 - -3.11 -4.51 -3.13 -2.92 0.74 1.15 0.56 0.14 0.5 0.8 0.33 0.78 0.47 0.13 -0.4 0.29
AMTR_s00149p00030910 (evm_27.TU.AmTr_v1.0_scaffold00149.9)
0.13 -0.19 -0.59 -1.65 0.95 - -0.9 -2.59 -0.6 -0.64 0.61 0.39 1.12 0.88 0.24 -0.42 0.27 0.09 0.18 0.11 -0.84 0.38
AMTR_s00158p00046520 (evm_27.TU.AmTr_v1.0_scaffold00158.5)
-0.14 1.01 -0.24 -0.91 0.94 -0.64 -2.59 -2.82 -2.31 -2.15 0.56 0.6 0.4 0.47 0.26 0.22 0.1 0.46 -0.22 -0.41 -0.8 0.78

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.