Heatmap: Cluster_268 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Cambium and expanding xylem
Cambium
Expanding xylem
Expanding and mature xylem
Maturing xylem
Maturing xylem and dead early wood
Wood
Dead early and late wood
Dead early wood
Dead late wood
Vegetative shoots - needles
Vegetative shoots - stem
Vegetative shoots
Girdled twig - stem
Dried twig - needles
Girdled twig - needles
Needles
Needles - dawn
Needles - later afternoon
Needles - midday
Needles - night
Buds
Female flower
Male flower
Pineapple galls
Somatic germinants - abnormal type
Somatic germinants - normal type
Cell culture - H20 - 5 days
Cell culture - KI added - 5 days
Cell culture - KI added - 20 days
Cell culture - KI removed - 4 days
Cell culture - KI removed - 12 days
Cell culture - solid medium
- -8.58 -5.01 -3.92 -5.23 -6.07 -7.03 -3.15 -5.16 -1.2 1.3 0.77 -6.22 2.06 0.35 1.44 0.61 1.71 1.54 2.93 1.68 -0.77 - -2.86 -5.43 -2.19 -1.7 -7.85 -5.97 - -5.56 -4.11 -4.97
- - - - -2.96 - -4.82 -3.48 0.81 -6.18 2.42 1.19 0.67 -0.13 - 1.69 -2.15 1.92 1.12 -1.53 0.51 0.6 2.01 - 1.82 -3.02 -2.12 -3.95 -6.2 -4.72 -6.17 -3.74 -
-1.07 0.23 -5.11 -5.36 -4.75 - 1.14 - - - 0.61 -0.59 -0.65 1.23 1.51 1.24 -1.02 0.74 1.44 1.75 1.31 1.09 -1.12 -0.51 -1.54 -1.21 -4.35 -0.35 -1.06 -1.45 -0.31 -0.35 -0.71
-0.87 -0.68 -1.28 -0.92 -0.49 0.26 -0.49 0.05 -0.01 0.39 0.53 0.03 1.19 0.59 -0.51 1.64 -0.92 0.32 0.64 0.13 0.67 0.18 0.21 0.61 0.55 -0.63 -0.35 -1.83 -1.25 -1.05 -1.47 -1.97 -1.58
-2.4 - -3.85 -5.12 - - -1.64 -2.06 -3.33 - 0.48 0.04 -1.99 2.12 1.74 1.83 -2.36 2.34 0.84 2.03 1.95 -1.94 -0.71 -2.58 -3.29 -3.21 -3.84 -0.42 -1.69 -2.36 -2.33 -1.72 -4.23
-0.24 -0.15 -0.55 -0.33 -0.33 0.07 -0.11 0.09 0.22 0.82 0.67 0.11 -0.08 0.59 0.02 0.82 -0.58 0.78 0.67 0.53 0.46 -0.11 0.05 -0.48 -0.45 -0.57 -0.66 -0.74 -0.62 -0.81 -0.74 -0.96 -0.59
-0.2 -0.26 -0.61 -0.51 -0.51 -0.41 -0.12 0.07 0.06 0.64 0.5 -0.1 0.41 -0.03 0.06 0.71 -0.85 0.47 0.88 0.64 0.78 0.03 0.44 -0.22 -0.34 -0.41 -0.56 -0.82 -0.34 -0.31 -0.6 -0.79 -0.59
-0.26 -0.56 -0.57 -0.61 -0.31 0.15 -0.16 -0.0 0.18 0.45 0.8 -0.23 0.07 -0.04 0.47 1.63 -0.38 0.96 0.6 0.2 0.84 -0.08 -0.1 -0.73 -0.15 -0.8 -0.78 -1.12 -0.78 -0.77 -1.11 -1.14 -0.96
-5.16 -6.38 - -10.24 -8.34 - -8.51 -8.74 -5.3 -4.95 1.2 -1.83 -0.5 -4.55 0.94 3.46 -1.01 1.39 1.49 1.6 1.16 -1.27 -4.77 -3.66 -1.2 -0.59 -0.82 -0.25 -0.8 -1.14 -0.54 -0.88 -2.46
-0.42 -0.71 -0.37 -0.51 -0.08 0.38 -0.37 0.31 0.22 0.75 0.73 0.23 -0.96 0.41 0.39 1.01 -0.77 0.91 0.68 1.12 0.82 -0.35 -0.88 -0.5 0.06 -0.64 -0.66 -1.15 -1.33 -1.21 -0.97 -1.2 -1.1
-2.6 -3.53 -1.76 -1.2 -1.18 -1.57 -1.5 -0.08 -0.2 1.31 0.24 -1.13 -4.61 2.24 0.88 1.78 -2.13 1.72 0.98 2.36 1.23 0.26 -5.85 -5.42 -6.44 -4.4 -4.85 -3.17 -3.67 -4.48 -3.47 -2.09 -5.22
-1.43 -1.3 -2.29 -3.73 -2.89 -3.7 -0.35 -2.5 -3.09 -3.52 0.48 -1.48 -0.32 0.55 0.25 1.56 -0.14 1.68 0.99 1.89 1.31 0.07 -1.04 1.8 -1.22 -0.3 -0.43 -0.47 -1.56 -1.56 -0.94 -0.74 -0.76
-2.34 -1.76 -1.44 -1.6 -1.52 -1.29 -0.12 -0.91 -0.48 0.44 0.96 0.23 -0.29 0.33 0.84 1.54 -1.19 1.34 0.94 1.33 1.19 0.47 -0.0 -0.62 -0.4 -1.02 -1.06 -1.41 -1.09 -0.59 -0.98 -0.93 -0.62
-3.04 -1.68 -1.25 -1.4 -1.51 -0.19 -2.22 -1.3 -0.78 1.59 -0.21 -1.92 -0.54 1.07 -1.15 2.37 0.29 1.91 1.35 1.72 0.73 -0.2 -2.65 -0.81 -0.42 -0.09 -0.37 - -3.73 -4.89 - -4.45 -3.2
-1.46 -1.2 -1.67 -1.25 -1.92 -0.51 -1.67 -1.15 -1.46 -1.1 1.23 0.07 -0.16 -0.31 0.74 1.07 1.1 1.87 1.55 1.12 1.52 0.41 -1.04 -2.52 0.67 -0.67 -0.49 -2.76 -2.18 -1.77 -2.84 -2.61 -1.46
- - - -5.39 -4.8 - -5.49 - - - 1.52 -1.53 -0.87 -1.76 1.62 2.14 1.09 2.38 1.99 1.69 1.94 -0.93 -3.37 -2.86 -1.69 -1.04 -0.55 -3.73 -3.3 -2.38 -3.21 -3.52 -2.34
-1.09 -1.5 -1.06 -0.49 -0.1 0.56 -0.38 -0.06 0.16 1.0 1.24 -0.06 -1.11 -0.22 0.05 0.47 -0.59 1.4 1.03 0.83 1.24 -1.48 -2.46 -0.59 -0.29 -0.6 -0.64 -0.72 -0.65 -0.47 -0.82 -0.99 -0.29
-2.25 -3.53 -2.02 -3.51 -4.88 -5.62 -2.73 -6.76 -5.56 -5.97 0.71 -1.1 -1.27 1.67 1.84 2.05 -1.5 1.55 1.44 2.05 1.61 -1.16 -1.82 -0.94 -2.23 -0.6 -1.06 -0.55 -1.27 -2.18 -0.85 -0.57 -1.45
-4.94 -0.47 -8.29 -0.89 -1.24 -6.73 -4.9 -1.14 1.24 -1.7 1.94 -2.21 -0.68 0.1 1.1 1.41 0.33 2.19 1.26 1.64 1.37 -3.96 1.04 -4.55 0.14 -4.1 -2.22 -5.66 -7.05 -4.71 -4.97 -7.63 -5.47
-5.75 -0.98 -7.13 -2.08 -1.97 - -4.54 -1.79 0.94 -2.9 1.77 -1.87 -0.5 -0.39 0.88 1.5 0.77 1.91 1.34 1.85 1.66 -3.66 1.6 -2.77 0.18 -3.37 -2.04 -6.27 -5.22 -3.8 -4.91 -6.89 -3.85
-1.19 -0.28 -2.56 -0.96 -1.91 -0.94 -0.69 -0.12 -1.04 1.26 0.6 0.11 -4.87 1.56 1.37 1.08 -4.38 1.8 1.01 1.29 1.16 0.79 -0.43 0.83 -3.77 -2.4 -2.63 -3.54 -3.13 -3.1 -3.44 -3.81 -2.41
-3.56 -2.58 -2.98 -1.99 -1.98 -0.76 0.45 -1.72 -1.68 -0.11 0.57 1.61 -0.63 1.72 1.55 1.19 -0.23 0.99 0.61 0.93 0.75 1.09 -1.25 1.31 0.05 -1.6 -1.39 -5.7 -4.48 -4.06 -5.08 -5.66 -4.78
-1.0 -0.68 -1.25 -1.78 -1.84 -1.32 -0.96 -1.57 -1.43 -1.17 0.87 -1.21 -0.94 0.17 0.67 1.43 -0.15 1.34 1.22 1.66 1.49 -0.13 -0.86 0.35 -0.71 -0.25 -0.5 -0.69 -0.63 -0.26 -0.86 -0.79 -0.38
-2.54 -2.23 -3.12 -2.41 -2.78 -2.78 -1.78 -2.07 -2.59 -2.2 1.03 0.39 -0.91 0.73 1.91 0.87 -0.54 1.47 1.99 1.21 2.07 -0.18 -0.43 -0.66 -0.18 -2.52 -2.51 -1.48 -0.99 -1.28 -1.96 -1.6 -0.58
-0.06 -0.74 -1.3 -2.13 -4.55 -3.84 -3.25 -4.58 -6.92 -3.55 1.24 -2.82 -2.39 -0.07 -0.93 2.54 -1.5 2.92 1.85 2.02 1.9 -5.61 - - -3.15 -1.07 -1.76 -3.82 -5.77 -5.57 -6.73 -5.75 -4.29
- - - - - - -3.06 - - - -1.23 - - 2.25 - 2.25 0.42 1.88 0.63 2.78 1.26 -0.78 - - - -4.01 - -0.17 0.54 0.12 0.36 0.03 -0.4
-0.72 -0.78 -1.34 -1.45 -1.0 0.42 -0.89 -0.37 -1.91 -0.03 0.89 0.92 0.83 1.22 -0.47 1.42 -0.77 1.38 0.6 1.33 0.96 0.6 -0.97 -1.53 0.54 -2.64 -2.56 -1.27 -1.67 -1.52 -1.63 -1.29 -1.81
-1.02 -1.2 -0.19 -1.14 -1.76 -1.75 -1.17 -1.41 -2.9 -3.61 1.93 2.15 -2.81 1.59 -0.2 -0.35 -1.6 1.79 1.61 0.6 1.69 -0.43 -1.27 1.14 -1.35 -2.1 -1.4 -6.36 -5.47 - -5.52 -7.25 -4.81
-1.54 -2.58 -0.62 -0.68 -0.59 -0.63 -0.3 -0.26 -0.69 0.07 0.8 0.89 -0.89 1.44 1.18 1.16 -0.72 1.25 0.84 1.44 1.06 0.85 -2.69 -1.35 -0.49 -0.52 -0.22 -2.77 -2.26 -2.24 -2.95 -3.09 -2.29
-1.21 -1.03 -1.58 -0.89 -0.34 0.49 -0.46 0.59 0.58 0.28 0.79 0.9 -0.96 0.13 1.19 0.92 -1.25 1.26 0.52 0.43 0.6 -0.04 -0.2 -1.52 0.66 -0.67 -0.58 -2.04 -1.09 -0.6 -1.39 -1.76 -1.16
-7.8 -9.22 -5.94 -6.72 -7.93 -9.34 -0.61 -9.99 -5.96 -6.37 1.86 0.92 -6.97 1.61 2.1 1.29 -1.51 1.78 1.26 2.24 1.63 0.33 -1.78 -9.43 -1.97 -1.36 -1.25 -5.46 -3.69 -3.72 -4.93 -3.85 -4.43
- - - - - - - - - - - - - - - - 4.55 - - - - - - - - 1.41 2.8 - - - - - -
-4.86 -5.46 -4.94 -3.74 -2.84 -3.93 -4.95 -1.23 -2.06 0.05 1.28 -2.49 -1.04 0.56 1.21 2.72 -0.46 1.39 0.36 2.58 0.39 -4.19 -4.69 1.23 -0.46 0.08 -0.15 -3.43 -4.57 -3.75 -4.96 -3.39 -3.84
-1.01 -1.89 - - -3.87 -3.81 -0.13 -0.25 -1.52 0.21 1.58 -0.17 - 2.12 1.49 1.45 -3.44 1.86 0.68 1.44 1.12 0.44 -1.6 0.28 -2.45 -4.93 -3.7 -1.42 -1.72 -1.56 -3.63 -3.02 -1.16
- -9.36 - - - - -1.14 - - - 1.03 -4.25 -7.65 1.38 -1.29 2.89 -1.82 2.5 1.49 2.68 2.08 -3.95 - - - -1.88 -2.12 - - - -7.07 -5.82 -
-2.54 - - - - - - - - - 1.32 - 0.91 - - 1.77 -0.44 1.93 0.83 2.14 2.28 - - 1.6 - -3.38 -1.47 -0.48 -0.35 0.06 0.18 0.02 0.37
-8.08 -4.5 - -2.87 -2.62 -3.83 -4.24 0.7 1.35 0.75 0.83 1.31 0.27 1.07 1.6 0.74 -0.93 1.25 0.96 -0.51 0.19 0.74 -5.17 -1.3 1.27 -1.46 -1.15 -1.42 -1.09 -1.49 -1.45 -2.22 -0.68
-1.5 -1.56 -2.72 -1.8 -1.6 -0.87 -0.25 -1.13 0.11 0.08 0.79 0.17 -1.37 1.99 0.54 1.45 -1.15 1.18 0.76 2.16 0.64 -0.49 -0.71 0.34 -1.38 -1.44 -1.17 -1.37 -2.03 -1.86 -1.18 -1.53 -2.12
-2.21 -2.08 -1.97 -1.25 -0.73 0.31 -0.8 -0.33 0.19 0.69 0.87 0.51 -0.36 1.59 -1.91 1.28 -1.12 1.33 1.22 1.11 1.09 -0.62 0.38 -0.9 -0.42 -1.12 -1.47 -1.34 -1.37 -1.38 -1.59 -0.94 -1.04
-4.87 -5.07 -5.9 -6.41 -5.54 -5.84 -1.64 -8.06 -10.18 -7.1 0.92 0.12 0.74 0.09 0.6 2.85 -0.9 1.24 1.17 1.5 1.03 0.72 -2.57 -1.02 -0.42 -0.4 -0.46 -0.42 -0.56 -0.68 -0.9 -0.84 -1.49
-2.03 -2.83 -1.39 -1.95 -1.32 -1.87 -0.27 -2.64 -3.65 -3.98 0.84 0.57 0.37 0.3 0.08 2.31 -0.27 1.28 1.01 1.31 1.08 0.33 -1.41 -1.26 -0.44 -0.28 -0.3 -0.23 -0.46 -0.46 -0.75 -0.51 -1.12
-1.85 -0.47 -3.81 -5.41 -4.99 -4.08 0.62 -4.67 -5.82 -4.93 0.37 0.42 -0.73 1.86 0.7 0.98 -0.8 1.48 0.86 1.36 1.06 0.95 -1.58 0.94 -0.16 -0.44 -0.47 -1.84 -0.64 -0.31 -1.0 -1.29 -0.48
-1.36 -0.81 -1.4 -1.19 -0.81 -0.79 0.01 -0.23 -0.21 -0.39 0.39 0.19 0.67 0.45 0.44 1.61 -1.67 0.83 0.86 0.92 0.69 0.39 0.28 0.75 0.04 -1.62 -1.79 -0.78 -0.6 -0.62 -0.62 -0.98 -1.13
- - - - - - - - - - 0.92 -3.91 -5.31 0.42 -0.75 2.32 0.07 2.33 1.9 2.35 2.58 -0.36 -7.67 -2.38 -2.71 -3.66 -5.21 -1.49 -2.5 -4.63 -2.49 -0.84 -0.49
-1.09 -0.91 -0.92 -0.48 -0.2 -0.18 -0.46 -0.12 0.26 -0.95 0.67 0.1 0.18 0.0 1.1 0.72 0.32 0.88 0.85 0.54 0.71 0.51 -0.12 0.57 0.16 -0.89 -0.56 -1.5 -1.19 -0.7 -1.4 -1.45 -0.45
-1.41 -2.35 -0.89 -1.6 -5.06 -5.47 -2.52 -4.86 -5.17 - 0.62 -0.53 -1.37 1.52 1.63 1.66 -1.48 1.68 1.72 2.07 1.68 -0.75 -1.82 -0.77 -2.48 -0.73 -1.28 -0.54 -1.73 -2.02 -1.19 -0.68 -1.57
- -1.65 -4.18 - - -0.42 1.0 - - - 1.87 - -0.61 2.32 1.85 0.87 1.39 - 0.93 - - 1.79 1.84 1.22 - -1.84 -0.04 - - - - - -
- -1.97 - - - - - - - - 0.59 0.02 - 2.12 - 0.57 2.55 0.73 2.09 1.6 1.63 -2.05 - -1.36 - 1.2 1.84 - - - - - -
- - - - -7.86 - -4.09 -8.09 - - -0.39 -5.66 -4.47 2.28 0.83 2.54 -0.98 2.24 1.37 3.0 1.64 -1.32 - -3.74 - -5.26 -5.75 -4.31 -4.22 -6.28 -5.47 -4.11 -5.87
-2.41 -2.9 -2.44 -1.82 -1.57 -1.41 -0.52 -2.02 -1.2 -0.8 1.33 1.25 -0.34 1.1 0.84 0.39 -1.05 1.17 1.67 1.33 1.85 0.55 -0.9 0.22 -0.71 -0.97 -1.1 -2.26 -2.15 -1.42 -1.62 -1.53 -1.53
-2.27 -1.39 -3.69 -4.75 -6.05 -5.39 1.73 -5.91 -7.33 -7.08 0.12 0.39 -0.59 1.75 0.56 1.24 -0.96 1.17 0.39 1.54 0.49 0.89 1.02 2.23 -0.64 -2.47 -2.91 -3.6 -2.73 -3.06 -4.04 -2.53 -2.44
-4.94 -7.78 -1.86 -1.98 -0.85 -4.13 -3.62 0.21 1.5 -1.93 1.84 0.71 -1.86 2.05 -0.71 2.28 -2.78 1.77 0.94 1.36 0.98 -1.58 - -3.63 -0.97 -0.11 -0.99 - -9.69 - - - -5.71
-0.99 -1.21 -2.14 -2.11 -0.81 -0.32 -0.51 -0.38 -0.5 0.27 1.5 0.65 -0.67 0.82 0.97 1.97 -0.81 1.37 1.47 0.77 1.56 -0.04 -0.3 -0.66 -0.14 -4.16 -2.23 - - - - - -
- -6.51 -6.3 -3.65 -4.7 -5.37 -7.44 -3.18 -5.53 -1.47 1.5 0.64 -8.46 2.33 0.57 1.55 0.58 1.42 1.34 2.9 1.5 -1.27 - -3.17 -7.37 -1.44 -0.89 -6.7 -6.11 -8.53 -7.27 -4.37 -6.14
- - - - - - -4.84 -4.63 - -4.82 0.5 -0.98 -0.19 - -2.19 1.8 0.04 2.27 1.55 1.55 1.65 -2.25 -4.9 - 0.46 0.33 0.28 -0.29 0.84 -0.03 -0.8 -0.12 1.24
- - - - - - -0.4 -1.23 - - 1.72 -0.39 - - -0.38 2.34 1.21 2.02 2.76 2.69 0.56 - - - -0.34 -3.61 - - - - - - -
-6.57 -6.36 - - -11.6 -9.47 -5.6 -9.11 -10.66 - 0.79 -0.1 -1.01 0.88 0.82 1.9 0.69 1.54 1.75 2.46 1.86 1.48 0.07 -4.05 -1.75 -1.31 -0.3 - - - - - -
-0.6 -0.48 -0.97 -1.15 -0.7 -0.5 0.11 -0.0 -0.01 0.42 0.81 0.34 -0.6 0.35 0.51 1.22 -1.4 0.91 1.03 0.96 0.43 0.51 0.46 -1.31 -0.38 -1.06 -1.01 -0.84 -0.54 -0.49 -0.84 -0.99 -0.57
-5.77 -5.41 -5.36 -5.64 -5.62 -7.01 -0.34 -8.35 - -7.61 0.9 0.84 0.54 0.64 -0.28 2.49 0.2 0.92 1.23 1.43 1.04 0.42 -0.44 -1.07 -0.31 -0.3 -0.22 -0.3 -0.6 -0.47 -0.9 -0.63 -1.13
-8.28 -9.83 -8.78 -7.03 -6.41 -7.98 -4.47 -4.36 -5.23 -3.72 0.15 -4.43 -3.69 -0.76 0.13 2.99 -0.12 2.43 2.13 2.24 1.95 -2.81 -5.77 -3.6 -3.05 -2.16 -4.23 -1.23 -2.71 -3.56 -3.08 -0.04 -2.15
-5.36 -5.54 - - -5.22 -3.42 - -1.56 -2.71 -4.72 0.47 -1.17 -3.67 -1.59 0.24 3.02 -1.05 2.5 1.62 2.11 2.51 -1.5 -1.71 - -1.86 -1.39 -2.12 - - - - - -
-0.61 -0.21 -0.71 0.0 -0.44 0.16 -0.53 -0.38 -0.73 0.21 0.61 0.21 -0.4 0.12 0.7 1.05 -0.78 1.1 0.73 0.61 0.74 -0.25 -0.74 -1.04 -0.0 -0.5 -0.41 -0.8 -0.25 -0.01 -0.59 -0.63 -0.18
-2.65 -1.77 -2.18 -3.67 -3.55 -3.19 -2.33 -3.93 -4.16 -2.88 0.29 -1.45 -4.33 0.95 2.22 0.99 -2.42 1.95 1.54 1.94 2.23 -1.85 -1.37 -1.48 -3.48 -0.82 -1.29 -0.43 -0.64 -0.9 -0.81 -0.98 -0.28
-1.2 -0.85 -0.84 -0.04 -0.15 0.48 -0.76 -0.09 -0.14 1.81 0.83 0.56 -1.67 0.37 0.55 0.06 -1.21 1.03 1.11 1.03 1.23 0.08 -0.79 -0.59 -1.09 -1.21 -1.17 -2.16 -2.24 -1.01 -1.33 -0.96 -1.46
-4.02 -3.74 -3.88 -6.38 -5.69 -4.92 -3.69 -7.95 -4.47 -5.72 1.77 2.17 -3.37 1.11 1.92 0.88 -1.57 2.11 1.93 1.19 1.87 0.18 -2.58 -2.03 -1.02 -3.04 -2.21 - -7.12 -6.16 -6.25 -8.26 -
- - - -6.21 -3.99 - - -3.03 -4.7 -1.18 1.62 0.01 - 2.13 1.12 0.81 1.54 1.48 1.17 2.66 1.27 -1.59 - -4.76 - 0.02 0.87 - - - - -5.54 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.