Heatmap: Cluster_30 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegoniophore (female)
Antheridiophore (male)
Antheridium (male)
Sperm
Sporeling
Thallus
Thallus (vegetative)
Thallus (MpPAP1OX-1)
Thallus (Tak1-2)
Thallus (MpPAP1OX-3)
Thallus (MpPAP1OX-2)
Thallus (Tak1-3)
mid rib (male)
Gametophyte
Gemmaling (female, hpt2040)
Gemmaling (male, hpt2040)
Gemmaling (BC3-38)
Gemmaling (Tak1)
Gemmaling
Gemma cup
gemma cup (male)
Aseptically grown rhizoids, thalloid, gemmae
Control
Cold (3°C)
Dark (3 days)
Heat (33°C)
Light (435 uEm-2s-1)
Osmotic (100 mM mannitol)
Nitrogen deficiency (0 mM KNO3)
Salt (40 mM NaCl)
Cold-Dark
Cold-Light
Cold-Mannitol
Cold-Nitrogen deficiency
Cold-Salt
Heat-Dark
Heat-Mannitol
Heat-Nitrogen deficiency
Heat-Salt
Light-Salt
Mannitol-Dark
Mannitol-Light
Mannitol-Nitrogen deficiency
Nitrogen deficiency-Dark
Nitrogen deficiency-Light
Salt-Dark
Salt-Mannitol
Salt-Nitrogen deficiency
ZT2 (2 hours after light)
ZT6 (6 hours after light)
ZT10 (10 hours after light)
ZT14 (2 hours after dark)
ZT18 (6 hours after dark)
ZT22 (10 hours after dark)
- 1.06 5.11 3.16 - -5.17 - - - - - - - - - - - - - - - - - - -0.83 -1.66 - -0.47 -1.27 -1.41 -1.5 - - - - 0.16 - - -1.77 0.39 - - - - -0.62 - -0.08 - - -0.12 - - -1.43 -
-1.37 2.41 4.94 2.39 -0.72 -1.81 -1.58 -1.29 -1.34 -0.89 -1.16 -2.4 -2.85 -2.29 - -2.4 -1.58 -1.63 -1.78 -1.67 -1.52 -1.7 -2.74 -4.73 -4.45 -1.28 -1.16 -2.64 -3.21 -2.68 -5.87 -1.94 -2.66 -4.34 -3.31 -1.84 -0.82 -0.77 -1.44 -1.29 -2.08 -1.18 -2.26 -3.93 -3.39 -1.58 -2.42 -2.95 -3.57 -4.5 -4.4 -2.61 -1.93 -2.91
-0.49 1.67 5.31 3.26 - - - - - - - - - - - - - - - - - - - - - - - - - - - -0.21 - - - - - - - - - - - - - - - - - - - - - -
-0.24 -0.7 4.85 3.72 -1.69 -2.48 -1.46 -1.62 -2.08 -1.68 -1.3 -2.14 -3.91 -1.44 - - - - - -2.7 -3.84 -0.15 -4.18 -5.72 -4.28 -1.6 -2.16 -3.53 -1.69 -2.54 -6.11 -2.95 -3.8 -2.76 -2.54 -7.08 -1.16 -1.14 -0.74 -0.16 -3.21 -0.85 -2.96 -3.28 -1.09 -3.45 -2.02 -3.96 -1.64 -3.73 -4.5 -2.97 -3.42 -4.28
-0.08 - 5.11 3.42 - -3.07 - 1.18 - - - - - - - - - - - - - - - - - - - - - - - - -0.3 - - - - -1.19 - - - -0.33 0.85 - -1.28 - -1.35 -1.3 - -1.28 - - - -
-0.95 1.2 5.19 2.71 - -2.19 - - - - - 1.71 - - - - - - - - - - - - - -1.94 - -0.13 - - - - - - - -0.07 -1.98 -1.85 - - -0.75 -1.85 - -1.75 - - - - - -0.8 - - - -1.51
- - 5.12 3.62 - - - - - - - - - - 0.89 - - - - - - - - - - - - -0.57 - - -0.52 - - -0.45 - - - 1.6 - - - - - - - - - - - - - - - -
1.02 2.26 5.36 1.84 - - - - - - - - - -1.83 - - - - - - - - - - - - -0.77 - - - - - -1.42 -1.21 -1.38 - - - - - - - - - - - - -1.49 - - - - - -
- 3.08 4.96 3.01 - -6.68 -4.26 - - - - - - -3.46 - - - - - - - - - - -1.86 - - - - - - - - - - -0.73 - -2.64 - - 1.19 -3.5 - -1.35 -3.39 1.1 - - - - - - -3.04 -
-0.47 1.02 4.82 3.13 -1.87 -1.53 0.04 -1.73 -3.44 -3.45 -3.59 -3.08 -3.28 -2.92 -2.16 -2.25 -2.21 -2.17 -2.65 -4.05 -2.88 0.1 -3.12 -3.84 -0.63 -2.84 -3.16 -3.23 -2.36 -3.06 -1.62 -2.46 -3.81 -3.69 -4.53 -1.04 -2.44 -1.48 -2.44 -3.09 1.1 -2.41 -2.82 -0.07 -2.81 0.3 -3.4 -3.26 -3.46 -3.91 -3.44 -2.48 -2.06 -2.06
-0.05 2.86 4.79 2.04 -2.86 -0.39 -0.07 -3.4 -2.46 -2.25 -1.64 -2.51 -4.07 -1.18 -2.04 -0.89 -1.16 -1.4 -2.9 -1.81 -1.31 -3.4 -2.84 -0.62 - -4.69 -3.74 -2.68 -1.21 -2.37 -3.74 -1.58 -0.07 0.67 -0.34 -3.95 -4.56 -1.45 -4.95 -2.97 -3.12 -4.22 -2.92 -6.01 -1.82 - -2.51 -2.17 -3.32 -3.35 -3.38 -2.14 -2.09 -2.2
-1.71 0.51 5.37 2.74 -0.72 -4.67 - - - - - - - - 0.6 - - - - - - - - - - - - - 0.16 - - - -1.77 - - - - -1.82 - - -1.81 - - - - - - - - - - - - -
-0.96 1.34 4.44 2.58 -1.92 -2.58 -1.47 -3.42 -1.22 -2.02 -2.31 -2.09 -1.96 -1.98 -5.34 -2.46 -3.17 -3.75 -2.24 -2.69 -3.39 -2.39 -2.54 -1.74 -2.66 0.11 -1.32 -1.74 -1.81 -2.11 -0.79 -1.61 -0.95 -1.09 -1.41 2.12 0.44 1.2 0.81 -0.87 -1.22 -0.53 -1.81 -1.64 -0.01 -1.89 -1.51 -1.84 -3.16 -3.65 -3.69 -4.06 -3.09 -3.33
-0.86 1.54 4.93 3.35 -2.96 -4.87 - - - - - - -1.42 -2.8 - - - - - - - - -3.61 - - -2.75 - - -1.98 - - -1.1 - -1.58 - 1.77 - 1.56 -1.23 - -2.72 -1.76 - - - - - - - - - -0.85 - -
-0.86 1.54 4.93 3.35 -2.96 -4.87 - - - - - - -1.42 -2.8 - - - - - - - - -3.61 - - -2.75 - - -1.98 - - -1.1 - -1.58 - 1.77 - 1.56 -1.23 - -2.72 -1.76 - - - - - - - - - -0.85 - -
-0.1 2.86 5.17 2.19 -2.5 -3.86 - -0.72 - - - - - -3.4 -1.42 - - - - - - - -3.63 - - -2.14 - - -1.02 -2.87 - -1.05 - 0.16 -2.93 -2.89 - -2.07 - - - - - -3.04 -1.36 - - -3.13 - - - - - -1.71
-0.78 -0.75 4.25 1.75 -1.38 -1.0 0.97 -0.93 0.01 0.65 0.26 -0.46 -2.06 -0.74 -2.56 -2.29 -1.9 -2.88 -2.01 -1.02 -1.17 0.77 -2.55 -2.67 -1.04 -0.21 -2.08 -3.24 -1.5 -2.52 -1.22 -1.55 -1.6 -0.98 -1.8 1.89 -0.24 1.23 0.06 -0.1 -0.35 -1.63 -2.08 -0.84 -0.63 -0.91 -1.93 -2.99 -2.1 -4.56 -3.69 -1.65 -1.26 -2.28
0.23 1.32 4.99 1.69 -2.22 -0.4 -4.77 -1.54 - -0.26 -0.56 -0.66 -2.62 -1.94 -1.24 -1.34 -1.12 -1.17 -0.05 - - -0.55 -2.6 -2.58 - -1.71 - -1.64 0.12 -2.14 -2.77 -2.93 -3.93 -1.63 -2.23 -3.76 -2.04 -0.21 -2.48 -3.85 - -2.39 -1.51 -3.83 -2.92 - -1.39 -0.75 -1.38 -1.25 -2.0 -1.75 -3.67 -1.58
-2.4 2.79 5.27 2.12 -0.64 -2.65 -2.92 - - - - - - -2.72 - - - - - - - - - - - -3.25 - - -2.95 - - -2.62 - - -1.8 - -2.4 -0.77 -2.74 - -4.26 - - -4.24 -4.14 -3.2 -3.25 -1.48 -3.9 -2.48 -3.12 -3.93 - -
1.49 3.28 5.03 2.5 -5.92 -4.75 -4.39 -2.04 - -2.21 -3.37 -2.73 - - - - - - - -1.71 -0.86 - - - -3.95 - -5.79 -6.27 - - -1.0 -1.52 - -5.26 -5.27 -6.24 - -2.13 - -5.39 -3.3 -5.43 - - - -3.28 -6.43 -5.47 - - - - - -
-3.86 1.76 5.3 2.68 -4.98 -1.03 0.8 - - - - - -2.15 -2.8 - - - - -0.59 - - -0.05 - -3.44 - -2.84 - - - - - - - -3.61 -3.61 - - - - - - -3.8 - - - - - - - - - - - -
-1.0 1.87 4.39 3.41 -1.31 -1.2 -1.47 - - -2.64 -0.63 -0.58 -2.61 -2.86 - - -3.12 -2.22 - - - -2.47 -1.87 -3.0 -1.39 0.29 -2.08 -2.2 -2.02 -1.54 -1.63 0.64 -1.19 0.28 -1.41 -1.25 -0.05 0.55 0.04 -0.57 -3.05 -1.83 -2.13 -2.7 -0.96 -2.46 -1.58 -0.97 -5.0 -3.98 -2.12 -2.41 -2.12 -2.34
-1.05 2.4 5.34 2.25 - - -1.09 - - - - - - - - - - - - - - - - - - -0.63 - - - -0.36 - - - - - - - -1.64 - - - - - - -1.59 - - - - - - - - -1.03
-0.44 2.52 5.19 3.13 -6.06 -3.37 -2.82 -4.93 -2.99 -3.6 -3.94 -1.46 -3.29 -3.0 -4.67 -3.77 -4.67 -3.64 -2.85 -3.77 -4.17 - -4.65 -7.2 - - -7.05 -5.65 -6.22 -5.14 -7.6 -5.12 -4.48 -3.4 -4.14 - -6.24 -5.5 -7.78 -6.65 -6.14 -5.43 -4.21 -7.55 -7.69 - -6.17 -6.79 -4.73 -7.79 - -7.44 -5.44 -
- - 5.14 2.9 - -3.82 - - - 0.9 - - - - - - - - - - - - - - - - - - - - - -0.25 -0.23 -1.13 - - - - - 0.33 - -1.36 - - 0.33 - - 1.09 - - -1.06 0.14 -0.82 -
-1.28 - 5.39 2.48 -1.45 - -1.89 - - - - - - - - - - - - - - - - - - - - -0.83 0.55 - - 1.35 -0.88 - - - - - -1.12 - - - - - - - - - - - - - - -
-0.35 1.16 4.34 1.65 -1.31 0.07 -1.29 -0.68 -1.23 -1.73 -1.47 -0.84 -1.26 -1.47 -0.82 -0.83 -0.97 -0.76 -2.13 -0.64 -1.28 -4.05 -0.87 -0.44 -1.31 -0.16 -1.54 -1.25 -0.18 -1.43 -0.6 -1.1 -0.45 -0.25 -0.45 -1.12 -0.2 0.63 -0.01 -1.32 -1.68 -1.3 -1.03 -1.27 -0.07 -1.6 -1.48 -0.85 -1.12 -1.5 -1.29 -0.73 -0.7 -1.06
-0.11 2.03 4.83 3.36 - -2.07 -2.35 - - - - - - - - -0.75 - -0.33 - - - -1.65 -2.36 -1.18 - -3.47 - -2.32 -1.35 -2.19 -1.96 -0.21 -0.23 0.18 -0.58 - -3.01 -2.77 -2.53 -2.76 -1.03 -2.13 -2.28 - -1.33 -3.27 -4.53 -2.16 -3.31 -4.15 -4.35 -2.54 -2.61 -
0.5 1.1 4.65 2.92 0.77 -0.76 -1.34 - - - -0.02 - - -1.98 - -1.06 - - - - - - -1.52 -0.74 -2.12 - -1.11 -1.03 -0.54 -0.22 -0.33 0.22 -0.69 -1.05 -1.11 - -1.31 0.45 -1.22 -0.42 - - - -1.62 1.06 - - - - -1.12 - -1.31 - -
-0.12 1.75 4.08 2.13 -2.03 -0.87 0.09 -1.32 -1.04 -1.73 -0.85 -0.51 -0.84 -1.21 -2.05 -1.71 -1.81 -1.74 -1.89 -1.64 -1.99 -0.57 -1.05 -2.47 0.0 -0.14 -0.09 -0.95 -0.86 -1.53 -1.29 -1.36 -2.4 -2.01 -2.95 0.5 -0.17 -0.08 -0.05 -1.11 0.71 -0.47 -1.03 0.03 -0.3 -0.05 -1.03 -1.16 -1.68 -1.28 -1.17 -0.65 -0.78 -0.93
-0.8 0.4 4.4 2.36 -1.84 -2.33 -1.66 -3.18 -1.66 -2.09 -2.06 -0.98 -2.59 -2.58 -2.72 - -3.76 -2.9 -3.69 -1.01 -1.84 -0.49 -2.15 -3.19 -1.72 0.9 -1.46 -2.43 -1.25 -1.46 -3.01 -2.49 -3.33 -3.96 -4.3 1.34 1.07 1.9 0.94 -1.32 -0.11 0.12 -1.63 -0.52 -0.88 -0.1 -1.72 -2.37 -3.76 -6.65 -3.38 -1.86 -1.38 -1.11
-2.77 3.49 5.03 1.92 -7.06 -0.53 -2.26 -2.2 -0.0 -0.89 -3.53 -0.41 -4.43 -1.86 - -4.0 -2.17 - - 0.38 -2.36 - -5.3 -3.91 -5.55 -5.05 - - -5.73 - -4.81 -3.93 - -5.82 - -5.91 -5.04 -6.13 -6.03 -5.86 - -4.4 -4.56 - - - - -4.05 - -5.7 -5.85 -4.67 - -
-3.31 2.15 5.04 2.08 -2.8 -3.23 -3.93 - - - - 0.35 - -3.25 -1.27 -0.36 -1.19 - - - 0.23 0.46 -1.28 - - - - -0.71 -0.73 - - -1.9 -0.86 -2.63 -2.9 - 0.29 -2.98 -2.0 -2.87 - -1.41 -1.52 - -1.92 - -1.98 -3.01 - -1.84 - - - -1.59
- 1.48 5.4 2.89 - -3.58 - - - - - - - - - - - - - - - - - - -0.12 - - - - - - - - -0.48 - - - - - - - - - - - - - - - - - - - -
- 1.16 5.39 2.9 - -4.26 - - - - - - - - - - -1.04 - - - - - -3.69 -2.43 - -2.06 - - - - -2.82 - - - - - -3.13 -1.98 - - - - - -2.79 - - - -2.95 - - -0.54 - - -
- 1.46 5.34 1.77 - -3.86 - - - - - - - - - - - - - - - - - - - - - - 1.37 - 0.88 -0.29 - - - - - - - - - - - - - 0.92 - - - - - - - -
0.44 2.69 4.98 3.28 -2.85 -5.75 -2.25 - - - - - - -2.57 - - - - - - - - - -2.11 - - - -2.24 - - - 1.03 -0.8 -2.24 -2.4 - -2.53 -0.86 - - - -2.48 - - - - - - - - - - - -
-1.5 2.49 4.86 2.51 -2.97 -2.28 -2.6 -2.2 -2.43 -3.26 -4.11 -2.9 -1.73 -1.65 -1.86 -2.11 -2.42 -2.26 -2.28 -1.77 -2.6 -1.67 -2.89 -3.85 -3.36 -0.59 -2.4 -3.28 -2.25 -2.52 -1.75 -0.16 -2.55 -2.62 -2.73 -1.78 -0.18 0.66 0.09 -1.86 -2.26 -2.12 -2.55 -2.85 -2.46 -3.56 -3.0 -2.83 -2.94 -3.28 -2.9 -3.44 -2.05 -2.88
0.69 1.75 4.59 2.27 -1.57 -1.07 -0.01 - - -1.09 - - -2.25 0.69 -0.51 - -0.57 - - 0.27 - -0.92 -2.4 -1.55 -2.89 -1.96 -2.74 -1.41 0.26 -2.36 - -0.92 - -1.37 -3.39 -1.4 -1.65 -0.56 -1.66 -1.92 -0.47 -1.6 -2.72 -0.89 -0.67 0.05 -0.42 -2.0 -0.54 -1.8 -0.13 -3.23 -0.87 -3.18
-1.06 2.63 5.11 2.82 0.5 -2.19 -2.44 - - - - - - - - -0.83 - - - - - - -3.24 - - - - - - -2.37 - -0.19 -1.42 -0.25 - - -1.67 - -2.51 - -2.51 - - - - - - - - - - -2.17 - -
0.45 0.75 5.31 2.21 - -4.26 -3.34 -1.59 - -1.76 - - -2.92 -3.3 - - - - - -0.97 - - -4.75 - - -3.25 - -3.88 - - -2.98 -0.92 -2.41 0.69 -2.07 -2.97 - -1.85 -2.15 -4.05 -3.11 -4.14 - - -2.06 - - - -1.97 -2.1 - -1.74 -2.24 -
-1.09 2.72 4.7 2.59 -1.9 -1.24 -2.65 -0.59 -2.64 -1.01 -1.39 -2.69 -0.6 -1.32 -0.86 -1.34 -1.1 -1.77 -3.08 -1.52 -1.01 -2.0 -1.94 -2.62 -3.28 -0.58 -1.42 -2.46 -2.59 -1.56 -3.37 -3.5 -1.95 -3.03 -1.78 -2.68 -2.66 -1.11 -0.79 -1.99 -2.28 -2.35 -2.21 -2.67 -1.9 -3.11 -1.78 -1.94 -1.0 -2.65 -2.22 -3.29 -1.48 -1.1
-1.09 2.45 5.31 2.13 - - - - - - - - - -1.62 - - - - - - - - - - - - - - - - - 0.73 - 0.6 - - - - - - - - - - -1.16 - - - - - - - - -
0.37 2.06 4.99 3.49 - -5.53 -3.3 - - - - - -2.13 - - - - - - -1.27 - - - - - - - - 0.81 - - - -3.42 - -1.46 - -1.69 0.52 -3.7 -3.47 - -3.59 - - -1.53 - - -3.63 - - - - - -
0.44 2.9 5.34 1.35 -1.89 -3.69 -6.47 - - - -2.83 - -4.3 -4.79 -3.77 -3.87 - - - -3.51 -2.31 -3.08 -4.42 -4.13 - -4.33 - -3.74 -5.61 -4.28 -5.73 -3.82 -3.72 -2.89 -4.08 - -4.42 - - -4.22 - - -4.46 - - - -3.6 - - - - - -5.42 -4.53
0.85 1.3 5.17 2.59 -2.79 - - - - - - - - -1.76 - - - - - - - - - - 0.38 - - - - - -0.18 -1.33 - - - 0.42 - -1.56 - - -1.3 - - 0.39 -1.27 -0.24 - - - - - - - -
- 1.69 5.38 3.14 - - -1.28 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.37 -0.47 5.13 2.83 - -1.52 - - - - - - - - - -0.77 - - - - 0.84 - -1.35 -1.49 - - - -0.06 -0.85 - - -2.2 -0.63 -2.09 -1.17 - - -0.73 - 0.14 - -2.33 -1.43 - - - - 0.13 - -1.17 -0.93 - - -
-0.45 -0.82 5.22 3.49 -4.03 -5.06 -3.95 -2.82 -1.89 - -3.16 - -3.02 -2.73 - -2.62 -3.33 - - -3.2 - -2.83 -5.57 -4.86 -2.44 -1.88 - -3.97 - -3.32 -5.46 -2.22 -3.87 -4.43 -2.62 -1.31 -2.5 -0.78 -3.66 -5.51 - -5.6 - - -5.48 - -4.62 -4.58 - -4.31 - - -5.14 -
- 2.81 5.42 2.08 -5.3 - - - - - - - - -4.02 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - 5.56 2.75 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.16 1.31 4.57 2.35 0.01 -1.7 -0.63 -1.6 -0.93 -2.82 -1.13 -0.98 -2.54 -0.12 -2.31 -2.18 -1.83 -1.95 - -1.8 -1.84 -1.87 -2.5 -1.56 -2.99 0.53 -1.67 -2.32 -2.57 -2.12 -4.01 -2.08 -2.03 -0.56 -0.95 -0.29 0.3 1.57 0.33 -0.42 -1.8 -2.19 -2.48 -2.94 -0.92 -2.35 -3.03 -2.79 -2.04 -2.64 -2.47 -1.87 -2.74 -2.94
- - 5.38 3.63 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 2.46 4.92 4.18 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-5.67 2.53 5.03 2.87 -1.04 -1.23 -2.34 -3.48 -0.54 -2.07 -1.65 -1.01 -1.73 -5.2 - -2.01 - -4.11 -2.98 -2.92 - -3.49 -4.1 -2.69 -2.58 -2.5 -3.97 -2.46 -2.26 -5.93 -1.77 -2.3 -1.65 -1.9 -1.75 -4.09 -2.8 -1.01 -3.47 -4.58 -4.59 -3.25 -3.0 -3.59 -2.37 -3.28 -4.71 -4.29 -4.12 -4.5 -6.15 -4.95 -3.26 -4.89
-5.67 2.53 5.03 2.87 -1.04 -1.23 -2.34 -3.48 -0.54 -2.07 -1.65 -1.01 -1.73 -5.2 - -2.01 - -4.11 -2.98 -2.92 - -3.49 -4.1 -2.69 -2.58 -2.5 -3.97 -2.46 -2.26 -5.93 -1.77 -2.3 -1.65 -1.9 -1.75 -4.09 -2.8 -1.01 -3.47 -4.58 -4.59 -3.25 -3.0 -3.59 -2.37 -3.28 -4.71 -4.29 -4.12 -4.5 -6.15 -4.95 -3.26 -4.89
- - 5.36 3.7 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.