Heatmap: Cluster_249 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Cambium and expanding xylem
Cambium
Expanding xylem
Expanding and mature xylem
Maturing xylem
Maturing xylem and dead early wood
Wood
Dead early and late wood
Dead early wood
Dead late wood
Vegetative shoots - needles
Vegetative shoots - stem
Vegetative shoots
Girdled twig - stem
Dried twig - needles
Girdled twig - needles
Needles
Needles - dawn
Needles - later afternoon
Needles - midday
Needles - night
Buds
Female flower
Male flower
Pineapple galls
Somatic germinants - abnormal type
Somatic germinants - normal type
Cell culture - H20 - 5 days
Cell culture - KI added - 5 days
Cell culture - KI added - 20 days
Cell culture - KI removed - 4 days
Cell culture - KI removed - 12 days
Cell culture - solid medium
-0.86 -0.65 -2.59 -1.99 -2.82 -2.92 -0.04 -4.18 -2.73 -3.75 0.02 -0.57 0.83 -0.33 0.44 0.41 0.48 0.39 0.06 0.83 0.44 0.42 1.41 0.42 0.35 0.4 0.45 -0.02 0.54 0.18 -0.12 -0.11 0.42
-4.38 -4.22 -6.15 -5.64 -4.74 - -1.54 -5.22 -3.72 -1.26 0.53 0.83 0.93 -0.57 -1.72 2.06 1.12 -0.29 0.17 1.16 -0.0 0.89 0.6 -3.56 0.95 -0.12 0.58 -2.51 0.24 0.88 -2.12 -0.95 1.37
-3.76 -4.32 -3.69 -4.63 -4.73 - -0.74 -5.63 - -6.61 0.15 -0.36 0.24 -0.21 0.29 -0.16 1.86 -0.49 0.32 0.28 0.51 0.2 0.09 -0.97 0.54 -0.09 0.29 1.1 1.01 0.93 0.95 0.9 0.66
-5.19 -4.78 -5.14 -5.63 -5.72 -5.8 0.57 -5.76 -7.22 -5.11 -0.76 0.8 0.5 -0.27 0.04 -0.84 1.64 -0.77 -0.29 -0.49 -0.41 0.7 0.39 -0.62 0.62 0.94 1.03 0.44 0.49 0.65 0.66 1.21 0.91
-2.54 - - -1.65 -0.5 - -0.53 -2.32 -1.15 - 0.69 -0.48 -0.21 0.53 0.12 -1.56 2.22 1.19 -1.5 0.44 - -0.93 - 0.28 -1.43 -0.52 0.49 0.23 0.92 1.41 1.55 0.67 0.37
-1.11 -1.25 -1.44 -1.65 -1.84 -1.98 -0.28 -1.9 -1.63 -3.1 -1.34 1.0 0.75 -0.25 -3.16 -2.36 1.63 -1.77 -3.67 -3.37 -2.93 1.25 0.57 1.15 1.04 0.72 1.0 0.96 0.48 0.34 0.04 0.32 0.83
-0.96 -0.94 -0.85 -1.05 -0.75 -0.63 0.79 -1.0 -0.8 -0.91 -0.29 1.09 0.23 0.69 -0.41 -0.7 0.41 -0.55 -0.6 -0.67 -0.51 0.61 0.52 -0.2 0.19 0.2 0.3 0.07 0.44 0.67 0.1 0.06 0.84
-3.27 -3.67 -5.54 -4.01 -4.65 -3.77 -0.77 -4.47 -4.47 -3.95 0.78 -0.86 0.24 -0.79 0.11 0.85 1.11 -1.3 1.29 0.69 0.78 -0.1 0.11 0.45 0.47 0.23 0.26 0.37 0.68 0.54 0.49 0.79 1.01
-1.53 -1.15 -3.8 -3.29 -4.08 -3.98 0.73 -4.68 -4.45 -4.73 0.19 0.73 0.58 -0.35 -0.68 0.16 1.21 -1.1 0.13 -0.35 0.2 0.16 0.76 -1.12 0.8 0.66 0.86 0.38 0.97 1.05 0.56 0.24 0.13
-1.7 -1.21 -3.74 -7.58 -7.38 -8.53 -0.16 -8.09 -9.25 -8.94 -0.58 0.34 0.81 0.18 -0.14 -1.51 1.37 -0.45 -1.25 -1.44 -1.11 0.19 -0.5 -0.55 0.33 0.39 0.87 0.95 0.35 1.31 1.21 1.46 1.55
-0.42 -0.23 -0.47 -0.31 -0.71 -1.09 0.04 -1.27 -1.56 -0.93 0.12 0.19 0.36 -0.08 0.36 -0.17 0.46 -0.07 -0.14 -0.42 -0.04 0.6 0.5 -0.05 0.7 0.22 0.25 0.06 0.41 0.43 0.09 -0.17 0.45
-3.58 - - -4.3 - - -0.55 -1.36 - - -3.47 -0.93 -0.98 -0.92 1.3 -1.01 1.92 0.15 0.46 -2.6 - -1.25 1.07 -2.76 -2.47 0.49 1.16 0.12 0.76 1.87 1.4 1.48 1.24
- -4.87 - -3.51 -5.26 -5.58 0.68 -7.86 -5.41 -5.66 -0.03 0.83 0.91 -0.67 -1.65 -0.75 1.51 -1.35 -0.91 -1.67 -0.33 0.96 1.31 -0.29 1.27 0.59 0.99 -0.03 0.94 0.89 -0.11 -0.21 1.29
-2.46 -1.67 -3.63 -4.11 -5.69 -4.89 0.03 -4.78 -5.01 -5.68 -3.94 -1.18 1.19 -1.14 -4.58 -3.6 1.52 -9.03 -4.99 -4.97 -5.78 -0.04 -0.55 0.42 1.01 0.5 0.35 1.52 1.59 1.52 1.43 1.48 1.56
-1.88 -1.85 -3.27 -4.33 -3.42 -2.83 -0.07 -4.86 -5.3 -7.44 -0.13 -0.54 0.88 0.6 -0.82 0.21 0.99 -0.75 -0.43 -0.49 -0.63 1.07 1.41 -0.5 0.77 0.28 0.5 0.49 0.53 1.05 0.37 0.48 1.19
-2.82 -2.86 -3.52 -3.18 -2.66 -3.68 1.2 -3.96 -3.96 -3.5 -0.59 1.52 0.71 1.08 -1.33 -0.46 1.01 -0.47 -0.12 -0.95 -0.39 1.03 0.98 -0.92 1.2 0.28 0.4 -0.04 0.23 0.42 -0.09 -0.25 0.86
-1.51 -1.7 -1.91 -2.18 -1.85 -1.74 0.56 -2.55 -1.87 -0.98 -0.21 0.3 -0.39 0.26 -0.25 0.09 0.72 0.17 0.43 0.16 0.1 0.56 0.66 -0.32 0.04 0.41 0.59 0.44 0.74 0.8 0.35 0.27 0.69
-1.67 -1.96 -2.92 -2.09 -2.21 -1.07 -0.59 -2.89 -2.59 -2.2 0.29 0.16 0.83 -0.41 0.19 0.14 0.97 -0.04 0.66 -0.01 0.67 0.19 0.87 -0.11 -0.18 0.6 0.6 0.16 0.72 0.74 0.28 -0.09 0.65
0.38 0.36 -0.73 -1.38 -2.4 -1.96 -0.51 -3.21 -3.07 -4.07 -4.44 -1.27 0.68 -1.18 -4.65 -3.87 1.48 -5.31 -5.07 -5.27 -5.72 -0.39 -0.43 -0.52 1.31 0.47 0.51 1.26 1.37 1.31 1.28 1.3 1.4
-3.61 -3.74 -4.29 -4.36 -3.9 -4.32 -1.27 -4.64 -6.39 -5.78 -1.4 0.92 0.64 0.8 -1.79 -2.6 0.99 -1.94 -2.37 -2.56 -2.21 1.05 1.09 -2.84 1.12 0.37 0.88 0.76 1.57 1.56 1.12 0.88 1.03
-2.46 -2.98 -2.83 -3.92 -2.78 -3.05 0.53 -4.35 -3.96 -3.27 -0.24 0.97 0.3 0.73 -0.59 -0.51 0.73 -0.5 -0.47 -0.88 -0.8 0.64 0.73 0.75 0.65 0.5 0.39 0.48 0.87 0.89 0.4 0.27 1.32
- -3.69 - - -4.27 - -1.48 -1.87 - - -0.49 - -2.08 -1.02 -0.02 0.47 2.11 0.05 -1.05 0.2 1.5 -3.12 - -0.28 -1.99 0.0 0.93 1.34 -0.01 1.24 0.81 0.91 2.32
-2.75 -2.91 -3.28 -3.46 -3.19 -3.99 -0.47 -4.3 -4.78 -5.03 0.15 -0.08 0.04 -0.13 0.24 0.62 1.23 0.19 0.49 0.56 0.25 0.45 0.47 -0.41 0.71 0.43 0.47 0.45 0.75 0.77 0.5 0.68 0.67
-2.97 -2.62 -3.89 -4.21 -3.82 -3.38 -0.68 -3.73 -3.78 -2.99 0.36 0.67 0.75 0.21 1.29 0.81 0.67 0.03 0.03 -0.01 0.38 0.63 -0.04 -0.01 0.82 0.04 0.2 -0.4 0.29 0.95 -0.31 0.07 1.3
- -7.76 -9.12 - -8.32 - -1.09 -3.96 - - 0.12 1.46 1.04 0.73 -0.6 0.11 1.12 -0.49 -0.1 -0.73 -0.21 0.78 0.92 -0.89 1.82 0.54 0.77 -0.48 0.54 0.82 -0.22 -0.53 0.65
-2.96 -2.4 -2.97 -2.97 -3.63 -5.38 1.53 -3.99 -7.2 -4.21 -0.36 0.89 0.42 0.18 -0.75 -0.35 1.01 -0.38 -0.25 -0.04 -0.85 0.88 0.9 -2.54 1.04 0.32 0.29 -0.65 0.76 1.3 -0.37 0.07 1.4
-1.37 -1.06 -1.65 -1.51 -1.71 -1.19 1.04 -3.04 -3.6 -2.11 0.32 0.9 0.21 -0.3 0.48 0.56 0.98 -0.01 0.08 0.56 0.4 0.43 0.17 -0.64 0.67 0.58 0.64 -0.96 0.45 0.51 -0.68 -0.79 0.24
-1.42 -0.79 -1.21 -1.55 -1.77 -2.51 0.26 -1.83 -2.28 -1.27 0.38 -0.75 1.01 -0.42 -0.32 -0.07 0.69 0.72 0.59 0.24 0.67 0.12 0.75 0.84 0.57 0.29 0.36 -0.25 0.43 0.19 -0.03 -0.32 0.15
-1.57 -2.07 -1.12 -0.98 -1.02 -1.47 0.56 -2.62 -2.52 -2.24 0.16 0.94 0.63 0.16 0.67 0.22 0.93 -0.21 -0.12 -0.21 -0.26 0.57 0.62 0.11 0.79 0.4 0.63 -0.85 0.19 0.49 -0.23 -0.32 0.34
-2.45 -2.08 -3.22 -2.87 -3.14 -2.62 0.02 -3.29 -2.87 -3.11 0.3 0.86 0.44 1.01 -1.2 -0.23 1.09 -0.21 -0.19 -0.28 -0.56 0.64 0.33 -0.7 0.95 0.44 0.55 0.34 0.75 0.99 0.43 0.26 0.97
-2.05 -1.7 -2.3 -1.74 -1.97 -1.5 0.01 -2.71 -2.91 -1.59 -0.23 0.48 -0.46 -0.2 -0.63 -0.83 1.52 -0.66 -0.47 -0.01 -0.61 -0.4 -0.29 -2.28 0.15 0.93 1.16 -0.16 1.08 1.82 0.52 0.38 1.32
-2.45 -3.79 -4.04 -3.95 -3.57 -4.74 0.64 -4.64 -6.01 - -0.21 0.09 -0.92 0.71 -0.6 0.08 2.06 -0.91 -1.01 0.37 -0.79 -0.42 -1.27 -0.86 -0.45 1.03 1.44 0.44 0.67 1.32 0.45 0.62 1.3
-2.67 -2.93 -0.61 -0.75 -0.79 -1.38 0.56 0.25 -1.0 -2.73 0.02 0.25 -0.64 -0.04 -0.97 0.3 1.01 -0.23 0.05 0.16 0.43 0.34 0.15 -1.38 0.58 0.51 0.45 0.19 0.74 0.71 0.01 -0.15 0.91
-4.7 -4.69 -4.35 -4.17 -5.75 - -0.24 - -5.3 -4.84 0.47 0.24 0.59 -0.58 0.22 1.08 1.24 -0.51 0.82 1.14 0.7 -0.26 0.24 0.45 0.25 -0.15 0.29 0.32 0.51 0.56 0.42 0.27 0.87
-1.03 -1.08 -1.42 -1.12 -1.7 -1.43 -1.13 -1.62 -2.33 -1.46 -0.5 -0.97 -0.28 -1.3 -1.9 -2.24 1.54 -0.66 -1.13 -0.94 -0.8 -1.22 -0.68 -0.88 -0.52 0.49 0.71 1.05 1.4 1.63 1.24 0.96 1.89
-0.59 -0.2 -1.06 -1.29 -2.07 -2.24 0.71 -2.87 -3.32 -2.51 -0.66 -0.1 0.5 -0.63 -0.05 -0.77 1.36 -1.09 -0.32 -0.35 -0.48 0.46 0.88 -0.17 0.49 0.33 0.52 0.54 0.46 0.81 0.54 0.66 0.79
-4.64 -4.78 -5.9 -5.69 -6.13 -7.06 1.15 -6.26 - - -0.18 0.97 0.94 -0.39 -0.47 0.08 1.4 -1.07 -0.14 -0.39 -0.35 0.84 0.72 1.45 0.74 -0.0 0.19 0.66 0.14 -0.18 0.4 0.85 0.12
-4.39 -5.18 -5.42 -4.81 -6.17 - 0.26 -6.85 - -6.51 1.11 0.27 -0.14 0.63 0.15 0.89 1.05 1.22 1.25 0.56 1.0 -0.04 -0.23 -1.62 0.84 0.52 0.55 -0.33 0.39 0.07 -0.51 -0.56 0.29
-1.72 -1.54 -1.67 -2.0 -1.86 -1.53 0.17 -0.98 -1.34 -0.94 -0.02 0.5 0.77 0.27 0.12 0.0 0.79 -0.09 0.05 -0.11 0.11 0.46 0.21 -0.11 0.32 0.34 0.5 0.21 0.2 0.77 0.29 0.26 0.76
-0.61 -0.57 -1.93 -3.54 -2.46 -3.26 -0.94 -2.81 -3.4 -2.86 -0.36 -1.58 -1.44 0.35 -0.31 -0.59 1.56 0.16 -0.51 -0.31 -0.89 0.4 -0.46 0.06 -0.94 0.29 0.46 0.83 1.46 1.6 1.04 0.63 1.27
-2.24 -2.76 -2.64 -2.85 -3.1 -3.76 0.42 -3.6 -4.2 -4.05 0.09 0.43 0.51 0.44 -0.56 0.33 1.24 -0.53 -0.02 -0.49 -0.22 0.49 0.7 -0.51 0.75 0.31 0.36 0.52 0.97 0.85 0.51 0.27 1.09
-2.25 -1.71 -3.63 -5.18 -5.28 -4.34 0.5 -3.51 -7.39 - -0.45 0.99 0.77 1.04 -0.28 -0.33 1.5 -0.6 0.46 -0.22 -0.58 0.96 0.99 -0.92 -0.03 0.62 0.46 0.44 0.45 0.47 0.42 0.19 0.47
-1.76 -1.85 -3.0 -3.32 -3.52 -2.87 0.7 - -6.27 -3.83 -0.46 -0.06 -0.33 -1.24 -2.27 -0.32 2.11 -1.74 -0.48 0.06 -0.29 -0.67 1.17 0.9 0.1 0.65 0.73 0.91 0.68 0.64 0.43 0.76 1.01
-2.47 -1.47 -2.47 -2.44 -2.98 -2.93 -0.03 -2.1 -2.35 -4.8 0.14 0.41 0.87 0.28 0.09 0.3 1.14 -0.9 0.65 0.34 0.24 0.28 0.24 0.61 -0.16 0.6 0.69 0.27 0.78 0.52 0.22 0.31 0.23
-5.23 -4.38 -5.37 -4.06 -5.21 -5.85 0.54 -6.96 -6.99 -6.19 0.17 0.92 0.42 0.27 -0.25 -0.05 1.32 -0.23 -0.12 0.37 0.05 0.18 0.38 -1.33 0.47 0.55 0.73 -0.42 0.84 1.6 0.21 0.12 1.13
-1.29 -1.45 -2.05 -2.05 -2.01 -3.03 0.25 -2.75 -2.86 -2.47 -0.59 0.72 0.38 0.48 -1.06 -0.16 0.67 -0.62 -0.01 -0.22 0.03 0.75 0.92 -0.25 0.43 0.37 0.35 0.36 0.99 1.08 0.48 0.28 0.93
-2.3 -2.64 -2.24 -2.16 -1.22 -0.73 0.39 -1.73 -2.51 -2.11 0.36 0.76 0.35 0.33 0.2 0.29 0.88 0.63 0.19 0.09 0.53 0.14 -0.53 -0.08 0.79 0.47 0.79 -0.21 0.43 0.5 -0.23 -0.4 0.51
0.13 -0.96 -0.72 - -0.45 - -0.21 -0.01 - - -0.26 2.01 -0.24 - 0.84 0.75 2.31 - - - - 1.08 0.72 0.59 - -0.47 -0.98 -0.09 -0.18 -0.12 1.14 -0.32 0.86
-2.96 -2.84 -3.79 -3.46 -3.51 -2.92 -0.23 -3.69 -3.61 -2.69 -0.22 0.42 0.51 0.39 0.55 0.22 0.87 0.02 0.26 0.5 0.12 0.57 0.97 -0.56 1.04 0.04 0.11 0.32 0.39 0.66 0.33 0.46 1.01
- -3.25 - -4.51 -5.98 - 0.82 -4.58 -2.7 -4.83 -1.43 0.66 -0.47 0.44 0.73 -1.5 1.54 -0.07 - 0.57 0.73 0.96 -1.53 -0.28 0.01 -0.17 0.11 0.63 1.08 0.8 0.94 1.06 1.19
-5.21 -4.14 -5.65 -3.74 -4.67 - 0.98 - -5.4 - -0.68 0.45 0.53 -1.19 0.37 -0.83 1.18 -1.02 -0.74 -0.49 -0.35 1.03 0.4 1.2 0.85 0.49 0.27 0.67 0.67 0.86 0.72 1.02 0.54
-2.77 -2.45 -2.95 -4.1 -4.85 -6.07 -0.96 -4.55 -4.54 - -2.62 0.65 0.5 -0.53 -2.1 -2.04 2.09 -5.78 -4.56 -5.95 -2.16 0.58 0.25 0.54 0.27 0.93 1.38 1.54 1.13 0.98 0.45 0.93 1.47
-0.94 -1.07 -1.4 -1.27 -0.67 -0.63 1.26 -1.48 -1.0 -1.43 -0.64 1.42 0.65 0.74 -1.56 -0.39 0.81 -0.86 -0.42 -1.02 -0.83 0.92 0.79 -0.9 0.99 0.18 0.25 -0.27 -0.16 0.3 -0.21 -0.58 0.67
-1.84 -2.95 -1.88 -2.59 -2.2 -2.78 1.52 -3.02 -3.66 -5.04 -0.11 0.11 0.69 0.36 0.45 0.57 1.38 -0.13 0.06 -0.06 -0.19 0.85 0.83 0.25 0.87 0.48 0.49 -0.38 -0.03 -0.01 -0.52 -0.34 -0.1
-2.31 -2.57 -3.74 -3.12 -4.48 -2.27 0.77 -4.01 -5.3 -3.7 -0.85 -0.45 0.14 -1.66 -0.54 -0.39 1.87 -3.07 -0.85 -0.35 0.11 -0.42 1.42 0.82 0.21 0.47 0.64 0.87 0.72 0.84 0.73 0.46 1.26
-0.26 -0.75 -0.15 -0.73 -0.28 -1.46 0.38 -1.68 -1.87 -2.11 -0.62 -0.22 0.07 -0.34 -0.13 -0.3 0.98 -1.01 -0.43 -0.49 -0.73 0.44 0.45 0.37 0.07 0.56 0.44 0.5 0.77 0.69 0.53 0.43 0.79
-6.04 -5.98 -7.55 -8.17 -12.42 -10.14 0.63 - - -8.82 -0.14 0.17 -0.1 -0.48 -1.19 -0.15 1.72 -0.74 -1.27 -0.96 -1.32 0.68 0.99 0.41 0.69 0.31 0.22 1.27 0.09 0.76 1.03 1.56 1.06
-4.18 -4.47 -8.09 -5.6 -7.74 - 0.65 -6.37 -6.76 -6.0 -0.16 1.57 1.36 -0.48 -0.54 -0.07 1.13 -1.17 -0.89 -0.75 -0.87 1.13 1.01 -1.26 1.74 0.44 0.83 -0.43 0.02 0.95 -0.08 -0.12 0.6
-3.97 -2.76 -5.46 -5.13 -5.37 -4.74 -0.67 -4.2 -8.0 -4.88 0.24 1.42 0.92 1.1 -0.42 0.18 1.05 -0.72 -0.47 -0.89 -0.51 0.72 0.85 -0.23 1.63 0.43 0.62 -0.49 0.49 0.76 -0.19 -0.31 0.84
-4.69 -3.72 -3.85 -4.23 -6.06 - 0.59 - -3.32 - -2.26 -1.16 0.5 -0.44 0.75 -0.95 1.56 - 0.11 -0.54 0.51 -0.26 1.66 -0.11 -0.41 0.67 0.54 1.12 0.37 0.87 0.43 1.25 1.19
-1.6 -1.77 -2.92 -2.98 -2.97 -2.61 0.29 -2.98 -4.05 -3.82 -0.25 0.13 0.68 0.9 -0.48 -0.07 0.52 0.22 -0.56 -0.46 -0.25 0.31 0.49 0.85 0.25 -0.04 0.29 0.65 0.92 0.95 0.53 0.55 1.19
-7.54 -5.68 -7.05 -6.8 -9.95 - 0.79 -8.42 -9.62 -8.65 -0.82 1.06 0.26 1.01 -1.04 -0.25 1.67 -1.29 -0.62 -0.9 -0.95 0.84 1.15 -0.53 0.69 0.7 0.76 0.17 0.56 1.06 0.39 0.39 0.85
-2.91 -3.94 -5.2 -4.24 -4.46 -6.66 0.49 -4.21 -4.13 - 1.02 0.95 0.09 1.01 1.11 0.43 0.8 0.33 0.85 1.45 1.17 0.43 0.08 -0.27 0.99 0.69 0.29 -0.93 -1.31 -1.17 -1.36 -0.9 -1.06
-6.75 -8.18 -8.07 -6.52 -8.73 -7.93 1.23 - - -5.89 0.03 0.78 0.0 0.28 0.02 -0.25 1.29 -0.64 0.24 0.41 0.22 0.79 0.26 -0.17 1.07 0.77 0.8 -0.51 0.44 0.88 -0.37 -0.04 1.03

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.