- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Maturing xylem and dead early wood | Wood | Dead early and late wood | Dead early wood | Dead late wood | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Buds | Female flower | Male flower | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -2.07 | -2.43 | -4.37 | -4.91 | -4.54 | - | 0.77 | -3.51 | -4.3 | -3.09 | -0.95 | 0.2 | 0.37 | -0.97 | -2.3 | -0.11 | -0.26 | -0.35 | -0.38 | -0.51 | 0.27 | 1.06 | 0.73 | 0.04 | 0.07 | -0.24 | -0.14 | 0.92 | 1.43 | 1.56 | 0.82 | 1.19 | 1.29 | |
| -3.08 | -1.97 | -4.55 | -4.47 | -3.76 | -4.47 | 0.9 | -4.81 | -4.34 | -5.74 | 0.23 | 0.3 | -0.36 | 0.43 | -0.26 | -0.86 | 0.05 | -0.63 | 0.21 | 0.33 | -0.42 | 0.87 | 0.91 | -0.18 | 0.14 | -0.68 | -0.36 | 0.68 | 1.31 | 1.38 | 1.02 | 0.58 | 1.25 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.