Heatmap: Cluster_434 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Cambium and expanding xylem
Cambium
Expanding xylem
Expanding and mature xylem
Maturing xylem
Maturing xylem and dead early wood
Wood
Dead early and late wood
Dead early wood
Dead late wood
Vegetative shoots - needles
Vegetative shoots - stem
Vegetative shoots
Girdled twig - stem
Dried twig - needles
Girdled twig - needles
Needles
Needles - dawn
Needles - later afternoon
Needles - midday
Needles - night
Buds
Female flower
Male flower
Pineapple galls
Somatic germinants - abnormal type
Somatic germinants - normal type
Cell culture - H20 - 5 days
Cell culture - KI added - 5 days
Cell culture - KI added - 20 days
Cell culture - KI removed - 4 days
Cell culture - KI removed - 12 days
Cell culture - solid medium
- - -3.88 -5.88 - -4.32 -0.1 - - - -1.82 -0.74 -0.77 -0.02 -0.33 -1.95 0.95 -1.65 -0.05 -1.58 -0.12 -0.26 0.05 -2.12 -0.57 -0.23 0.15 1.39 1.78 2.0 1.5 1.38 1.89
-1.1 -1.39 -1.26 -1.22 -0.96 -0.79 0.14 -1.34 -1.41 -1.27 -0.41 -0.04 -0.99 -0.59 -0.21 -0.56 0.58 -0.64 -1.07 -1.0 -1.02 -0.16 -0.45 -1.09 0.19 0.39 0.51 0.88 1.48 1.56 0.9 0.82 1.42
-0.98 -1.69 -1.5 -1.73 -1.53 -1.22 -0.8 -2.52 -1.95 -0.91 -0.69 -1.24 -1.51 0.18 0.18 -0.53 0.37 -1.75 -0.78 -0.6 -1.04 -0.54 -0.06 -1.4 -0.94 0.46 0.72 1.15 1.62 1.65 1.17 1.23 1.56
-0.54 -1.15 -1.02 -1.29 -1.05 -1.8 -0.41 -1.39 -1.39 -1.58 -0.94 -0.18 -0.59 0.13 -0.96 -1.3 0.12 -1.4 -1.34 -0.92 -1.04 -0.29 -0.38 -1.1 -0.86 0.4 0.58 1.31 1.53 1.58 1.41 1.1 1.49
-2.37 -3.12 -3.45 -3.0 -3.5 -4.3 -1.24 -2.97 -3.43 -2.7 -1.16 -0.8 -0.29 -0.47 -0.0 -1.11 0.54 -0.12 0.12 -0.49 -0.77 -0.53 -0.36 -0.82 -0.98 -0.09 0.21 1.45 1.7 1.73 1.5 1.51 1.65
-1.48 -1.09 -1.27 -1.35 -1.05 -0.68 0.26 -1.24 -1.11 -1.97 -0.51 0.23 -0.2 0.37 -0.09 -0.34 0.46 -0.17 -0.15 0.04 0.1 0.41 0.79 -0.12 -0.4 -0.21 0.09 0.68 1.08 0.89 0.66 0.35 0.86
-0.56 -0.25 -0.86 -0.68 -1.0 -0.7 0.11 -0.6 -1.07 -0.23 -0.61 -0.33 0.24 -0.08 -0.34 -0.5 0.5 -0.39 -0.52 -0.45 -0.54 0.01 0.02 0.23 -0.54 0.18 0.36 0.57 1.08 1.11 0.62 0.4 0.87
-4.25 -3.96 -7.3 -5.9 -7.07 -5.86 -1.15 - - -3.64 -0.14 -0.61 -1.04 -0.97 -1.08 -0.39 0.84 -0.61 -0.33 -0.65 -0.27 -0.68 -1.1 -1.4 -0.6 -0.23 0.17 1.61 1.68 1.91 1.59 1.45 1.98
-0.8 -0.56 -0.71 -0.71 -0.65 -0.5 0.21 -0.73 -0.67 -0.45 -0.36 0.33 -0.04 -0.05 -0.22 -0.45 0.44 -0.39 -0.39 -0.44 -0.34 0.25 0.15 -0.27 -0.25 -0.17 0.07 0.54 0.99 0.99 0.47 0.38 1.05
-1.45 -1.75 -1.66 -1.57 -1.17 -1.67 0.22 -2.95 -3.43 -2.5 -0.04 -0.1 -0.29 0.55 -0.09 0.0 0.67 0.18 -0.23 -0.21 -0.3 0.37 0.28 -0.22 -0.33 -0.26 0.03 0.71 1.15 1.33 0.81 0.65 1.18
-0.71 -0.98 -0.89 -1.16 -0.58 -0.97 0.33 -1.27 -1.3 -2.24 -0.42 -0.35 -0.15 -0.37 -0.29 -0.49 0.39 -0.36 -0.66 -0.77 -0.44 -0.04 0.15 0.57 -0.57 0.17 0.23 0.88 1.26 1.22 0.82 0.69 1.11
-1.37 -1.13 -1.65 -2.09 -2.01 -2.32 -0.32 -2.31 -2.07 -3.01 -0.28 0.0 -0.86 -0.6 -0.98 -0.37 0.8 0.08 -0.29 -0.13 -0.44 -0.13 0.33 -1.38 -0.68 -0.1 -0.03 1.15 1.46 1.56 1.12 1.07 1.54
-0.88 -0.71 -1.53 -1.16 -1.33 -1.58 0.13 -1.5 -1.69 -1.9 -0.25 -0.28 -0.67 -0.39 -0.4 -0.32 0.81 0.04 0.03 0.11 -0.27 0.16 0.52 -0.65 -0.6 -0.45 -0.28 0.9 1.18 1.29 1.0 0.81 1.17
-1.14 -1.08 -1.6 -1.81 -1.67 -1.93 -0.39 -1.89 -1.78 -1.43 0.22 0.27 -0.49 -0.02 -0.48 -0.34 0.47 -0.31 0.08 -0.05 -0.07 -0.18 0.21 -1.02 0.09 0.39 0.54 0.76 1.21 1.26 0.87 0.68 1.18
-1.92 -2.04 -2.18 -2.26 -2.68 -2.93 0.13 -3.54 -3.61 -2.77 -1.1 -0.25 -0.8 -0.62 -0.3 -1.11 0.68 -0.86 -1.09 -1.26 -0.84 -0.26 -0.17 -1.09 -0.57 0.04 0.2 1.68 1.86 1.51 1.49 1.15 1.68
-1.49 -1.4 -2.0 -1.51 -1.53 -1.23 -0.03 -1.46 -1.74 -1.13 -0.33 0.33 -1.19 0.25 -0.3 -0.78 0.86 0.1 -0.56 -0.35 -0.55 -0.09 -0.44 -0.81 -0.51 0.09 0.49 0.73 1.36 1.48 0.9 0.72 1.46
-1.02 -1.08 -0.91 -0.97 -0.78 -1.17 0.17 -1.43 -1.92 -1.81 -0.72 -0.02 -0.55 -0.61 -1.57 -1.8 0.5 0.02 -0.82 -0.74 -0.27 0.02 0.1 0.19 -0.34 0.72 0.65 0.47 1.53 1.49 0.95 0.62 1.12
-1.83 -1.84 -2.23 -1.8 -2.42 -1.9 0.14 -3.6 -3.61 -1.81 -0.22 0.59 -0.94 0.41 0.31 -0.18 0.63 0.14 -0.11 0.01 -0.29 0.19 0.38 -0.74 0.14 0.37 0.54 0.82 0.85 1.07 0.75 0.8 1.15
-0.87 -1.17 -1.13 -1.12 -0.81 -0.82 0.28 -1.01 -0.98 -1.24 -0.16 0.06 -0.36 -0.15 0.11 -0.26 0.81 -0.29 -0.2 -0.32 -0.48 0.04 -0.15 -0.49 -0.35 0.21 0.43 0.65 1.03 1.1 0.59 0.61 1.06
-5.47 -5.23 -4.58 -5.33 -5.81 -6.56 -0.83 -3.82 - -6.78 -1.59 -0.5 -0.84 -0.37 -1.1 -1.39 0.19 -2.47 -1.57 -0.59 0.05 -0.2 0.61 -1.28 -1.36 -0.37 0.08 1.31 1.98 2.0 1.82 1.47 1.96
-0.93 -0.81 -1.07 -0.66 -0.89 -0.53 0.41 -1.63 -1.55 -1.11 -0.74 0.04 0.19 0.29 -0.49 -0.27 0.41 -0.39 -0.49 -0.39 -0.38 0.33 0.41 0.33 -0.79 -0.11 0.18 0.74 0.97 1.09 0.71 0.54 0.91
-2.18 -2.45 -2.91 -3.0 -2.83 -3.14 0.13 -3.16 -3.8 -3.07 -0.43 -0.64 -0.93 -0.18 -0.77 -0.27 0.74 0.28 -0.52 -0.51 -0.64 -0.44 -0.83 -0.44 -0.69 -0.65 -0.02 1.3 1.63 1.72 1.38 1.23 1.8
-1.52 -0.99 -1.47 -1.26 -1.01 -0.54 -0.22 -0.52 -0.84 -0.62 -0.29 0.04 -0.82 -0.05 -0.07 -0.2 0.7 -0.29 -0.09 -0.05 -0.32 0.0 -0.2 -1.23 -0.07 -0.15 0.14 0.91 1.07 1.13 0.95 0.75 1.02
-1.14 -1.52 -1.72 -1.91 -2.6 -4.29 0.92 -5.5 -4.59 -2.97 -1.92 -0.24 -0.05 -0.37 -1.08 -1.66 0.92 -1.56 -2.15 -2.01 -2.14 0.35 0.89 -0.0 0.21 0.11 0.38 1.1 1.69 1.46 1.37 0.87 1.35
-5.33 -6.04 -6.25 -6.31 -7.79 -6.21 -0.5 -8.26 -6.57 -6.68 -0.97 -0.06 -0.23 -0.82 -0.88 -0.85 1.14 -1.25 -0.54 -0.98 -0.4 -0.2 -0.09 -0.83 0.05 -0.36 -0.07 1.4 1.72 1.85 1.23 1.38 2.0
-0.65 -0.92 -0.81 -0.99 -0.65 -0.63 0.17 -0.78 -0.88 -1.32 -0.23 0.34 -0.49 0.16 0.07 -0.13 0.23 -0.26 -0.25 -0.39 -0.27 -0.0 0.43 0.02 -0.4 0.22 0.37 0.67 0.98 0.87 0.45 0.32 0.91
-1.02 -1.15 -1.25 -1.55 -1.23 -0.91 0.11 -1.85 -1.96 -1.87 -2.1 0.26 -0.04 -0.3 -1.01 -2.15 0.21 -1.79 -1.98 -1.89 -1.98 0.52 0.36 -0.8 0.06 0.35 0.63 1.18 1.48 1.66 1.23 1.04 1.32
-1.23 -1.13 -1.32 -1.23 -1.22 -0.68 -0.45 -0.99 -1.51 -1.16 -0.72 -0.44 -0.65 -0.13 -0.68 -0.9 0.75 -0.48 -0.84 -0.99 -0.75 -0.22 -0.31 -0.48 -0.54 -0.34 0.05 1.35 1.45 1.51 1.31 1.1 1.3
-6.77 -5.86 -7.47 - -8.51 - -0.61 -6.92 -5.05 -7.17 -1.16 -0.71 -1.0 -0.54 -1.48 -0.98 1.0 -1.18 -0.45 -0.28 -0.43 -0.57 -0.6 -1.07 -0.9 -0.71 -0.01 1.59 1.86 1.98 1.54 1.42 2.09
-0.54 -0.74 -1.14 -1.5 -1.5 -0.89 -0.28 -1.77 -1.55 -1.89 0.35 -0.91 -1.27 -0.33 -1.07 0.02 0.46 0.41 -0.26 -0.03 -0.5 -0.61 -1.2 -0.92 -0.57 -0.26 0.0 1.21 1.46 1.47 1.0 0.9 1.44
-4.82 -6.6 -5.68 -5.87 -4.44 -4.78 -0.71 -3.52 -3.9 -3.35 -1.1 -1.51 -1.15 0.29 -1.69 -1.78 0.44 -2.27 -0.35 -0.72 -0.57 -0.16 -0.06 -1.45 -1.36 -0.64 -0.33 1.58 1.78 2.21 1.66 1.38 2.13
- -6.02 -6.75 - -5.2 - -0.74 -2.25 - -3.51 -0.68 -1.32 -0.96 -1.76 -5.22 -1.85 1.35 -0.82 -0.44 -0.23 -0.15 -0.95 -1.25 -1.56 -3.18 -0.32 0.6 1.39 2.13 2.0 1.54 1.4 2.02
-0.86 -0.7 -0.74 -0.69 -0.67 -0.61 0.04 -0.91 -1.15 -0.98 -0.24 -0.08 -0.45 -0.11 -0.35 -0.14 0.32 -0.07 -0.32 -0.44 -0.39 -0.12 0.53 -0.63 -0.28 0.29 0.36 0.68 1.06 0.97 0.69 0.58 1.06
-1.24 -0.84 -1.75 -1.33 -1.81 -1.53 0.3 -2.2 -2.35 -1.0 -0.78 0.03 -0.4 0.21 0.07 -0.38 0.56 -0.11 -0.46 -0.13 -0.01 0.05 0.26 0.1 -0.33 0.47 0.55 0.76 1.04 1.08 0.76 0.6 1.11
- -5.18 - - - - -1.46 - -1.26 - -1.11 -1.34 -0.98 - -2.92 -3.01 1.4 -0.43 -0.37 -0.08 -0.4 -0.22 -0.63 -0.76 -1.47 0.07 0.82 1.43 1.89 2.15 1.2 0.83 2.18
-5.17 -3.6 -5.61 -5.2 -4.8 -5.59 -0.9 -5.2 - - -0.87 -0.96 -2.11 -3.43 -2.62 -1.05 0.71 -3.04 -0.21 -0.66 -0.17 -0.63 0.24 -1.52 -2.07 -0.02 0.04 1.75 2.02 2.12 1.65 1.32 2.08
-1.05 -1.23 -0.55 -0.65 -0.47 -0.6 0.36 -1.55 -2.02 -2.27 -0.95 0.12 -0.21 -0.17 -0.51 -0.59 0.57 -0.79 -0.68 -0.54 -0.6 0.54 0.42 0.18 -0.43 0.29 0.43 0.88 1.11 1.07 0.64 0.53 1.16
- -6.53 -6.59 - -7.69 - -0.63 - -7.13 - -0.89 -0.29 -0.11 -0.15 -0.81 -0.27 0.77 -1.87 -0.37 0.09 -0.29 0.01 -0.02 0.1 -1.02 -0.92 -0.51 1.42 1.78 1.87 1.32 1.17 1.92
-1.42 -0.85 -1.65 -1.44 -1.55 -1.38 -0.05 -1.76 -1.72 -1.31 -0.65 -0.01 -0.85 -0.41 -0.48 -0.91 0.93 -0.51 -1.13 -1.11 -0.84 -0.27 -0.66 -1.18 0.23 -0.13 0.2 0.99 1.55 1.62 1.1 1.05 1.62
-6.45 -6.6 -5.69 -5.94 - - -1.07 -5.0 - - -0.66 -1.84 -2.81 -0.65 -0.49 -1.3 1.41 -2.49 -1.12 -1.31 -2.34 -0.88 -3.86 -1.35 -0.89 -0.21 0.04 1.73 2.17 1.99 1.82 1.46 2.09
-1.18 -1.62 -1.62 -1.57 -1.73 -2.05 0.05 -1.78 -2.14 -2.22 -0.29 0.01 -0.89 -0.45 -0.37 -0.19 0.3 0.08 -0.07 -0.34 -0.06 -0.26 -0.4 -0.37 -0.87 0.34 0.36 1.09 1.23 1.34 1.2 0.79 1.6
-5.7 -5.52 -5.08 -3.66 -5.02 -3.98 -0.11 -3.51 -5.49 -6.25 -1.21 -0.14 -0.41 -0.93 -0.92 -0.97 0.67 -0.47 0.57 0.07 -0.34 -0.1 0.82 -0.63 -1.61 -0.05 0.17 1.62 1.51 1.64 1.09 1.12 1.72
-0.81 -1.0 -1.15 -1.54 -0.83 -0.76 0.45 -1.3 -1.19 -1.52 -0.95 0.11 -0.36 0.02 0.48 -0.75 0.37 -1.05 -0.6 -0.9 -0.45 0.47 0.68 0.11 -0.33 0.42 0.64 0.43 1.43 1.04 0.63 0.07 0.93
-0.92 -0.61 -0.66 -0.32 -0.93 -0.93 0.22 -1.02 -1.18 -1.04 -0.83 0.09 -0.49 0.29 -0.34 -0.64 0.49 -0.45 -0.7 -0.45 -0.52 0.3 0.04 0.07 -0.86 0.2 0.44 0.77 1.17 1.09 0.65 0.52 1.08
-4.38 -4.62 - -5.4 -5.18 - 0.08 -5.01 - -4.59 -1.38 -1.73 -1.84 0.63 -1.72 -1.08 1.42 -1.65 -1.02 -1.37 -0.76 0.12 -0.19 -2.41 -0.36 0.12 0.43 1.72 1.78 1.8 1.58 1.17 1.66
-0.81 -1.0 -0.96 -0.94 -0.4 0.01 -0.14 -0.74 -0.55 -0.91 -1.17 0.02 0.11 0.02 0.51 -0.43 0.26 -0.67 -0.57 -0.73 -0.6 0.26 0.34 0.73 -0.22 0.33 0.34 0.38 0.81 0.88 0.48 0.39 0.87
-0.98 -0.79 -0.75 -0.91 -0.92 -0.81 0.1 -1.06 -1.17 -1.45 -0.08 -0.04 -0.23 0.3 0.0 -0.07 0.4 -0.06 -0.24 -0.15 -0.1 -0.04 -0.13 0.04 -0.22 -0.15 0.1 0.77 1.06 0.96 0.69 0.46 0.95
-1.46 -1.91 -1.08 -0.76 -0.78 -1.34 0.96 -1.64 -2.42 -2.14 -1.01 0.25 -0.48 -0.03 -0.41 -0.14 0.42 -0.21 -0.39 -0.5 -0.41 0.07 -0.13 -0.51 0.18 0.35 0.49 0.71 0.92 1.12 0.81 0.89 1.27
-0.79 -0.81 -0.81 -0.8 -0.78 -1.2 0.21 -1.2 -1.56 -1.42 -0.42 0.03 -0.74 -0.23 0.03 -0.64 0.65 0.05 -0.6 -0.48 -0.34 -0.22 -0.29 -0.61 -0.52 0.35 0.38 0.74 1.13 1.19 0.85 0.76 1.31
-3.09 -2.72 -4.28 -3.7 -4.46 -3.78 0.26 -4.78 -5.34 -3.33 -1.17 -0.57 -0.57 0.07 -0.79 -1.26 0.63 -1.12 -0.89 -0.93 -1.61 0.17 0.57 -0.55 -0.95 -0.09 0.08 1.53 1.88 1.6 1.45 1.29 1.71
- -6.03 - - -5.54 - -0.57 -5.08 - - -2.75 -0.15 -1.04 -1.64 -3.22 -2.31 1.45 - -3.26 -0.32 -0.97 0.25 0.51 -1.31 -1.02 -0.01 0.63 1.98 1.85 1.41 1.88 1.29 1.84
-1.12 -1.23 -0.97 -0.72 -0.99 -1.0 -0.48 -2.07 -2.06 -2.0 -0.41 -0.35 -1.52 -0.1 -0.77 -0.45 0.53 -0.56 -0.66 -0.84 -0.62 -0.56 -0.18 -1.36 -1.68 0.12 0.3 1.06 1.45 1.65 1.49 1.31 1.4
-1.72 -1.81 -2.22 -2.47 -1.56 -2.01 -0.05 -1.75 -1.73 -1.98 -0.45 0.19 -0.19 -0.35 0.22 -0.15 0.44 0.07 -0.18 -0.48 -0.29 0.18 0.41 -0.11 -0.14 0.39 0.67 0.77 1.35 1.28 0.93 0.47 1.02
-0.83 -0.66 -1.26 -1.55 -1.54 -1.04 0.13 -3.4 -1.94 -1.77 -0.31 -0.12 -1.19 -1.6 -1.03 -0.48 0.78 0.13 -0.86 -1.07 -0.98 -0.11 -0.38 -0.68 -1.2 -0.06 0.04 1.07 1.67 1.72 1.44 0.7 1.47
-1.99 -1.92 -2.11 -1.66 -2.03 -2.23 -0.7 -1.94 -3.38 -2.47 -0.31 -0.29 -0.24 -0.27 -0.45 -0.02 0.47 -0.71 -0.15 -0.22 0.1 -0.23 -0.97 -0.95 0.07 -0.39 -0.01 0.94 1.51 1.74 1.19 0.87 1.84
-1.38 -1.42 -1.96 -2.25 -1.85 -1.96 0.05 -3.24 -2.86 -2.33 -0.14 0.01 -0.75 0.09 -0.17 -0.22 0.82 -0.13 0.22 0.01 0.22 -0.09 0.08 -1.23 -0.43 0.41 0.73 0.75 1.26 1.25 1.02 0.66 1.14
-2.75 -3.21 -2.94 -3.31 -2.8 -2.94 -0.41 -3.02 -2.63 -3.43 -0.15 -0.25 -0.45 -0.12 -0.14 0.03 0.63 0.04 -0.39 -0.32 -0.4 -0.14 -0.44 -0.45 -0.23 -0.24 -0.1 1.23 1.48 1.61 1.27 1.22 1.57
-1.38 -1.19 -1.79 -1.65 -1.42 -0.86 0.33 -2.0 -3.29 -3.56 -0.79 -0.12 -0.36 -0.2 -0.7 0.08 0.72 0.08 -1.32 -0.85 -0.18 -0.18 0.02 -0.77 -0.11 0.16 0.37 0.93 1.26 1.47 1.06 0.78 1.53
-6.54 -4.69 -5.58 -6.01 -7.78 -5.39 0.63 -6.09 - - -1.54 0.05 -0.28 0.11 -1.03 -1.24 0.27 -2.94 -0.73 -0.89 -0.57 0.59 0.88 -0.55 -1.26 -0.19 -0.12 1.53 1.81 1.58 1.48 1.25 1.66
-2.26 -1.33 -2.44 -2.21 -2.18 -1.48 -0.01 -1.82 -2.06 -1.49 -0.02 -0.46 -0.82 0.18 -0.56 -0.0 0.85 0.53 -0.12 -0.3 -0.19 -0.33 -0.46 -1.13 -1.35 -0.44 -0.01 0.75 1.57 1.75 0.91 0.82 1.51
- -5.16 -7.7 - -7.6 - -0.54 -4.56 - - -0.78 -0.18 -0.7 -1.84 -0.44 -0.93 1.16 -1.32 -0.68 -0.22 -0.19 -0.47 -0.42 -1.38 -1.26 -0.09 0.35 1.41 1.92 2.03 1.27 1.0 2.07
-1.51 -1.63 -1.53 -1.47 -1.41 -1.91 0.51 -3.32 -2.97 -2.85 -0.68 -0.29 -0.22 -0.02 -0.29 -0.22 0.68 -0.62 -0.74 -0.73 -0.64 -0.07 0.38 -0.03 -0.84 0.22 0.42 1.12 1.37 1.31 1.07 0.89 1.4
-3.0 -4.56 -5.55 -4.0 -4.94 -3.21 -0.47 -5.85 - -4.69 -1.75 -1.18 -1.58 -0.79 -1.06 -0.95 0.78 -1.75 -0.21 -0.96 -1.01 -0.56 0.27 -1.83 -0.91 0.19 0.31 1.59 1.64 1.8 1.68 1.73 2.03
-5.21 -4.49 - - -5.58 - -1.22 - -4.55 -4.57 -1.94 -1.51 -2.35 -0.6 -0.6 -1.59 1.34 0.01 -0.79 -0.47 -1.13 -1.87 -0.72 -3.39 -3.1 0.06 0.43 2.04 1.78 1.51 1.87 1.75 1.9

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.