Heatmap: Cluster_116 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00272670 (evm_27.TU.AmTr_v1.0_scaffold00001.551)
1.31 - - 1.79 1.77 - -3.66 0.11 -2.38 -3.11 -0.29 0.87 0.61 0.3 -2.32 - -2.12 -0.32 - -0.04 1.84 -
- 3.23 - 2.51 1.24 - -3.07 - -2.47 -3.87 0.14 -0.78 -2.49 -2.27 -1.46 -0.76 -2.76 -1.97 -1.48 -3.24 -2.13 -3.94
AMTR_s00003p00264130 (evm_27.TU.AmTr_v1.0_scaffold00003.357)
- - - 2.11 1.94 - -1.33 - -1.32 -1.66 -0.18 - -1.24 -1.14 -1.62 - 1.65 0.72 0.02 0.58 -0.02 1.24
AMTR_s00005p00226560 (evm_27.TU.AmTr_v1.0_scaffold00005.100)
- - - 2.8 3.75 - - - - - - - - - 0.69 - - - - - - -
AMTR_s00006p00117750 (evm_27.TU.AmTr_v1.0_scaffold00006.43)
- - - 3.79 3.03 - - - - - - - - - - - - - - - - -
AMTR_s00007p00147170 (evm_27.TU.AmTr_v1.0_scaffold00007.108)
- - - 3.48 1.58 - - - 0.01 - - - 2.77 - - - - - - - - -
AMTR_s00008p00179110 (evm_27.TU.AmTr_v1.0_scaffold00008.97)
- - - 3.34 3.51 - - - - - - - - - - - - - - - - -0.99
AMTR_s00012p00098780 (evm_27.TU.AmTr_v1.0_scaffold00012.51)
0.76 - - 2.09 3.09 - -4.16 - -5.79 - -1.82 - -0.45 -1.94 -1.33 - 0.2 - - 0.05 1.42 -0.11
AMTR_s00014p00223740 (evm_27.TU.AmTr_v1.0_scaffold00014.85)
- - - 2.37 2.87 - - - - - - 1.17 -3.7 -3.63 -4.06 - - - - - 2.82 -
- - - 2.98 2.18 - -2.62 - - -3.46 -1.11 - -2.46 -2.54 -1.04 - -1.42 - - -1.11 2.83 -4.04
AMTR_s00019p00082720 (evm_27.TU.AmTr_v1.0_scaffold00019.59)
0.67 1.3 - 1.67 1.28 0.54 -0.93 0.32 -1.17 -1.03 0.78 1.09 -1.29 -1.54 -1.61 -2.69 0.32 -1.0 -1.34 -3.4 -1.74 -0.83
AMTR_s00019p00112170 (evm_27.TU.AmTr_v1.0_scaffold00019.88)
- - - 3.52 1.73 - 1.66 - 0.09 - - - -1.25 0.35 0.39 - - - - - - -
AMTR_s00022p00234770 (evm_27.TU.AmTr_v1.0_scaffold00022.324)
-0.07 2.49 -1.29 1.98 2.99 - - - -2.56 -2.57 - - -4.68 - 0.53 0.42 - - - - - -
AMTR_s00023p00144850 (evm_27.TU.AmTr_v1.0_scaffold00023.80)
- - - 1.91 2.99 - 0.47 - -1.52 -0.8 - - - 0.42 1.06 - - - - 2.18 - -
AMTR_s00027p00221270 (evm_27.TU.AmTr_v1.0_scaffold00027.91)
- - - 0.49 2.64 - -2.11 - -0.01 -1.71 -0.53 - -2.08 0.56 -0.14 - - 1.06 -0.1 -0.99 2.49 -1.26
AMTR_s00027p00242120 (evm_27.TU.AmTr_v1.0_scaffold00027.141)
- - - 2.86 2.69 1.58 - - -1.04 -1.16 - - - -1.38 0.89 - - - - 1.09 - -
AMTR_s00031p00199770 (evm_27.TU.AmTr_v1.0_scaffold00031.97)
- - - 3.38 2.14 - - -2.64 - - -1.17 0.06 -1.58 0.54 1.22 - -0.44 -1.13 - - - -2.18
AMTR_s00039p00088660 (evm_27.TU.AmTr_v1.0_scaffold00039.48)
- - - 2.29 3.64 - - - - - - - 0.23 -1.11 1.59 - - - - - - -
AMTR_s00041p00205790 (evm_27.TU.AmTr_v1.0_scaffold00041.193)
- - - 3.17 3.22 - 0.35 - - - - - - - - - - - - - - 1.24
AMTR_s00042p00220780 (evm_27.TU.AmTr_v1.0_scaffold00042.71)
- 0.49 0.54 2.98 1.76 - -4.39 - -3.92 -5.51 0.01 1.02 -2.0 -1.03 -0.26 -1.35 -3.92 -1.98 1.12 -2.78 - -4.04
- - - 3.36 2.77 - -8.2 - -17.29 0.32 1.58 - -1.07 - -2.6 - - - - - -15.57 -
AMTR_s00065p00178210 (evm_27.TU.AmTr_v1.0_scaffold00065.148)
- - - 2.18 3.51 - - - -4.26 -2.26 -0.58 - -1.17 -1.52 1.4 - - 0.11 -0.87 - - -3.45
0.92 0.3 - 2.09 1.82 - -5.49 - -8.07 -6.76 -0.2 -0.29 0.66 -0.3 0.09 0.55 -0.5 0.15 0.4 -0.37 -1.29 -3.02
- 1.67 - 3.59 2.68 - - - -1.49 - - - - - - - - - - - - -
AMTR_s00070p00051900 (evm_27.TU.AmTr_v1.0_scaffold00070.21)
- - - 3.22 3.38 - - - - - - - - - 0.64 - - - - -0.52 - -
2.2 2.48 - 2.42 0.65 - -2.83 - -1.65 -1.86 -2.16 - -1.71 -4.16 -1.41 - 0.75 -2.09 - -3.79 - 0.3
AMTR_s00072p00052960 (evm_27.TU.AmTr_v1.0_scaffold00072.20)
- - - 3.97 2.66 - - - - - - - - - - - - - - - - -
AMTR_s00073p00181960 (evm_27.TU.AmTr_v1.0_scaffold00073.59)
- - - 3.72 3.0 - - - - - - - -0.25 - - - - - - - - -
AMTR_s00086p00032850 (evm_27.TU.AmTr_v1.0_scaffold00086.10)
- - - 3.52 3.14 - - - - - - - - - 0.78 - - - - - - -
AMTR_s00088p00019910 (evm_27.TU.AmTr_v1.0_scaffold00088.4)
- - - 2.99 2.4 - - - -3.91 -4.59 -1.93 -0.05 -0.96 -1.61 -1.28 -0.62 -0.5 -0.24 - -0.17 1.6 -3.74
AMTR_s00095p00137270 (evm_27.TU.AmTr_v1.0_scaffold00095.99)
- - - 2.52 2.78 - - - - - -1.66 - -2.82 -2.56 -1.96 - -2.06 -0.11 -1.28 -0.4 2.54 -1.31
AMTR_s00106p00097950 (evm_27.TU.AmTr_v1.0_scaffold00106.66)
- - - 2.96 2.76 - -2.51 - -1.78 -1.82 - - -1.78 - 0.15 - 1.12 - - -1.24 1.22 -1.45
AMTR_s00109p00025130 (evm_27.TU.AmTr_v1.0_scaffold00109.8)
- - - 3.36 2.05 - - - 1.78 - - - 2.05 - - - - - - - - -
AMTR_s00110p00082690 (evm_27.TU.AmTr_v1.0_scaffold00110.42)
- - - 2.78 1.43 - -3.74 - -2.46 -1.78 1.52 - -0.98 -0.8 -1.96 - - - 0.6 -0.92 2.42 -1.85
AMTR_s00110p00101080 (evm_27.TU.AmTr_v1.0_scaffold00110.62)
- - - 3.42 3.49 - - - - - - - - - - - - - - - - -
AMTR_s00113p00130020 (evm_27.TU.AmTr_v1.0_scaffold00113.29)
- - - 0.86 2.75 - -6.49 -5.09 -7.97 -5.68 0.64 0.68 -1.25 -3.22 0.74 -0.89 0.61 0.12 -0.41 -1.09 1.74 -1.7
AMTR_s00119p00130560 (evm_27.TU.AmTr_v1.0_scaffold00119.103)
- - - 0.85 2.68 - -3.3 - -3.01 -2.09 - - 0.34 -0.72 -0.18 -0.21 0.34 0.17 - -0.23 2.59 -1.25
AMTR_s00127p00103610 (evm_27.TU.AmTr_v1.0_scaffold00127.24)
- - - 3.58 0.85 - 0.25 - 0.2 0.36 - - -0.32 -2.01 1.63 - - - - - - -0.96
AMTR_s00136p00084340 (evm_27.TU.AmTr_v1.0_scaffold00136.43)
- - - 3.04 3.09 -0.73 - - -5.95 - - - -4.47 -5.69 -2.88 - - - - - 2.15 -
- - - 2.98 3.37 - - - - - - - - - - - - - - 1.9 - -
AMTR_s00203p00028810 (evm_27.TU.AmTr_v1.0_scaffold00203.7)
- - - 3.72 2.74 - - - -1.5 - - - 0.37 - -1.0 - - - - - - -
AMTR_s00350p00011890 (evm_27.TU.AmTr_v1.0_scaffold00350.1)
- - - 2.81 3.9 - - - - - - - - - - - - - - - - -
- - - 3.97 2.36 - - - - - - - 0.27 - - - - - - - - -
- 0.12 - 1.38 2.25 -1.84 -4.32 1.82 -2.2 -2.6 -1.64 -0.47 -1.33 -0.85 -1.69 -2.03 -2.45 -1.66 -2.64 -0.73 2.35 -1.33

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.