Heatmap: Cluster_19 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegoniophore (female)
Antheridiophore (male)
Antheridium (male)
Sperm
Sporeling
Thallus
Thallus (vegetative)
Thallus (MpPAP1OX-1)
Thallus (Tak1-2)
Thallus (MpPAP1OX-3)
Thallus (MpPAP1OX-2)
Thallus (Tak1-3)
mid rib (male)
Gametophyte
Gemmaling (female, hpt2040)
Gemmaling (male, hpt2040)
Gemmaling (BC3-38)
Gemmaling (Tak1)
Gemmaling
Gemma cup
gemma cup (male)
Aseptically grown rhizoids, thalloid, gemmae
Control
Cold (3°C)
Dark (3 days)
Heat (33°C)
Light (435 uEm-2s-1)
Osmotic (100 mM mannitol)
Nitrogen deficiency (0 mM KNO3)
Salt (40 mM NaCl)
Cold-Dark
Cold-Light
Cold-Mannitol
Cold-Nitrogen deficiency
Cold-Salt
Heat-Dark
Heat-Mannitol
Heat-Nitrogen deficiency
Heat-Salt
Light-Salt
Mannitol-Dark
Mannitol-Light
Mannitol-Nitrogen deficiency
Nitrogen deficiency-Dark
Nitrogen deficiency-Light
Salt-Dark
Salt-Mannitol
Salt-Nitrogen deficiency
ZT2 (2 hours after light)
ZT6 (6 hours after light)
ZT10 (10 hours after light)
ZT14 (2 hours after dark)
ZT18 (6 hours after dark)
ZT22 (10 hours after dark)
1.73 -0.28 0.9 1.78 1.19 -1.1 -3.75 -0.17 -3.04 0.38 0.83 -2.3 -1.54 -1.04 0.11 -0.37 -0.37 -0.85 -1.16 0.91 -0.67 0.64 -1.5 -0.18 -1.1 0.42 -0.36 -1.06 0.13 -1.86 -1.82 -0.43 -0.65 -0.02 -1.68 1.52 0.7 1.7 -0.07 -1.46 1.51 -0.47 -1.45 0.58 -0.18 0.96 -1.57 -2.0 -2.19 -1.52 -1.44 -0.67 -1.1 -1.41
0.74 0.26 1.09 3.24 1.87 -0.54 -1.44 -0.12 -2.16 -0.02 0.3 -2.58 -1.32 -1.46 -1.23 -0.54 -1.33 -1.34 -0.46 0.77 -0.36 2.16 -2.6 -0.69 -1.54 -0.06 -1.29 -1.15 -0.62 -2.43 -1.95 -0.92 -0.64 -0.42 -1.91 1.2 0.46 1.26 -0.45 -2.06 0.99 -0.98 -1.83 0.33 -0.58 0.45 -1.91 -2.39 -2.98 -2.73 -2.43 -2.05 -1.91 -2.22
-0.7 -1.15 -6.79 -5.36 4.93 -0.34 0.51 -0.22 -0.26 -0.3 0.15 -0.39 -2.33 -1.48 -1.45 -1.46 -1.27 -1.18 -0.34 -0.94 -0.83 1.13 -1.61 -1.94 -1.89 -3.65 -1.82 -1.86 -0.97 -1.8 0.22 -1.2 -1.8 -1.82 -1.78 -3.91 -3.22 -2.54 -3.06 -2.08 -2.56 -1.86 -1.85 -1.31 -1.53 -2.61 -1.78 -1.38 -2.59 -1.81 -1.43 -1.32 -1.53 -1.98
0.1 1.69 - 3.56 1.08 - -1.18 - - - 1.96 - - - - - - - - - 3.06 - -0.38 - - 0.45 1.22 - 1.01 - -0.25 - 1.87 - -0.4 - 1.64 0.83 - 0.6 - 0.44 - - 1.87 - - - - - - - - -
-0.64 -1.68 2.73 1.05 3.3 -1.5 -2.15 -2.1 -0.54 - -1.4 -0.6 -1.95 -2.61 -2.03 -2.06 -2.89 -3.73 -0.24 0.11 -0.72 - -1.53 -2.0 -4.27 -1.13 -0.98 0.01 1.62 -0.08 -2.68 -1.2 -0.49 0.01 -0.77 -2.24 0.0 1.19 0.06 0.26 -2.09 0.3 1.27 -1.37 1.64 -1.56 -0.04 1.02 -0.57 -0.6 -1.64 -2.51 -1.91 -2.26
- - - 3.2 5.3 -0.94 - - - - - - - - - - - - - - - - - - - - - - - - 0.15 - - - - - - 0.13 - - - -0.08 0.79 - - - - - - - - - - -
-1.22 -0.73 - 1.23 5.37 -3.82 -1.67 -1.7 - - -0.42 - - -3.38 - - - - - - - -1.67 - - -2.68 -0.87 -1.43 -2.03 -2.78 -2.4 - - - -3.96 -1.77 -4.08 -0.26 -0.57 -0.3 -2.14 -2.17 -0.8 -1.37 - -0.67 -2.55 -1.46 -3.21 - - -4.12 -3.73 -2.41 -
-3.63 -4.1 -0.38 1.03 4.37 -0.75 -0.53 -0.97 0.19 0.49 0.16 2.03 -2.66 1.43 - - - -4.41 1.41 1.93 1.12 2.0 -4.27 -3.15 -4.78 -1.92 -2.5 -3.62 -2.78 -3.88 -6.11 -3.7 -5.17 -3.17 -1.85 -3.4 -0.95 -0.57 -1.08 -3.67 -3.27 -0.02 -3.34 -4.73 -1.53 -3.18 -4.81 -3.19 -6.19 -4.79 - -5.97 -2.8 -5.91
1.17 -0.87 0.3 0.97 0.32 0.35 0.71 0.23 -0.38 - 0.15 -0.44 -1.6 -0.72 -2.02 - -0.29 -1.95 0.76 -0.73 1.02 0.67 -1.11 -2.25 0.94 0.18 1.28 0.35 -0.81 -0.25 -0.97 -3.69 -0.45 -0.3 -2.01 1.0 -0.09 0.65 0.42 -0.82 1.17 -0.73 -2.3 0.87 -0.18 1.07 -0.93 -0.15 -0.51 0.19 -1.3 -0.54 0.46 -0.62
- - 3.24 4.29 3.09 -1.82 - - - - - - - - - - - - - - - - -0.17 - - - - - - - 0.76 2.99 -0.3 -0.17 - 1.37 0.46 - - - - - - - - - - - - - - - - -
-6.23 -6.73 - -4.49 5.75 -9.17 -8.53 - - - - - - -7.9 - - - - - - - - - - - -7.15 - - -6.66 - -8.55 - - - -7.54 - -8.83 -4.3 -5.55 - -8.7 -7.72 - - -7.65 - - - - - - - - -
1.14 - - 1.37 3.61 0.03 -1.12 - - 0.18 - - - - - - - -0.27 1.86 - - - -0.12 -1.42 -2.35 0.77 - 0.15 0.63 -0.02 -1.78 -0.95 0.64 0.14 1.09 -0.26 0.85 1.37 1.01 0.37 -0.09 -1.01 -1.12 0.17 -0.31 -2.89 -3.03 -0.2 -0.1 -1.16 -1.93 0.13 -2.56 0.12
- - - 4.87 2.27 -0.37 - - - - - - - - - - - - - - - - - - - 1.75 - - - - - - - - - - - 2.0 - 2.94 - - - - - 2.03 - - - - - - - -
-1.89 -1.98 2.97 1.42 3.52 -1.38 -2.53 0.77 1.2 0.41 0.37 1.89 -2.91 0.49 - - - - -0.97 2.26 1.8 -0.47 -6.35 -2.43 -2.0 -5.32 -2.62 -4.56 -3.51 -3.18 -0.95 -0.63 -1.19 -1.29 -1.13 -4.41 -3.39 -2.84 -3.92 -2.6 1.19 -0.98 -3.37 -1.43 -3.07 0.9 -2.94 -4.89 -3.59 -4.19 -4.62 -4.7 -5.25 -4.14
-1.35 -1.4 -4.4 -0.77 2.6 0.32 -0.29 -0.66 0.03 0.59 1.14 0.11 -1.48 -0.43 -0.76 -1.43 -1.44 -1.15 -0.67 -0.26 -0.36 0.74 -0.25 1.01 -0.21 -0.72 0.55 0.07 -0.23 -0.5 -1.92 0.75 0.69 0.24 0.81 -1.3 -0.17 -0.05 -0.48 1.03 0.07 0.49 -0.26 -0.12 0.27 -0.07 -0.22 -0.4 -0.8 -1.07 -1.04 -1.64 -0.57 -0.37
-2.1 - - 5.45 2.4 -4.96 -2.54 - - - - - - - - - - - - - - 0.76 - - - - - - -0.06 - - - - -0.83 - - - -0.52 - - -1.99 - - - -1.88 - - - - - - - - -
-0.8 -2.31 -1.73 -1.86 4.27 -0.7 -0.96 0.39 1.36 0.05 -0.04 1.78 -2.38 0.53 -2.65 -2.13 -2.45 -2.24 -0.89 1.3 0.72 1.45 -3.22 -3.01 -2.32 0.05 -1.0 -2.2 -2.17 -1.96 -3.16 -2.86 -1.28 -2.64 -0.83 -1.9 -0.23 -0.07 0.02 -0.45 -0.47 -0.06 -1.64 -1.05 -0.4 -1.11 -1.5 -2.38 -2.45 -2.79 -3.13 -1.87 -2.57 -2.95
1.4 - - 4.05 3.05 -2.73 -1.13 - - - - 3.06 0.95 - - - - 1.32 - - - - - - - - - -0.16 - - - -0.34 -0.25 -0.17 - - - - -0.53 - - - - -0.39 -0.37 - -0.39 0.59 1.31 - -0.19 0.94 - -
- - 2.92 4.81 4.21 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.15 1.65 3.23 2.66 1.86 0.19 -0.01 -1.6 -0.98 -2.22 -1.8 -0.45 -3.51 1.05 -0.32 -0.19 -0.42 -0.95 0.17 -1.32 -1.57 0.53 -1.96 -1.29 -2.59 -0.4 -1.19 -0.6 -0.09 -1.39 -3.61 -0.65 -0.54 0.07 -0.79 -1.73 0.57 0.32 0.03 -1.49 -1.83 -0.57 -0.33 -3.71 0.17 -3.44 -0.69 -0.14 -1.16 -1.48 -1.6 -2.72 -1.48 -1.57
-5.2 - - 1.64 5.67 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - 4.74 3.1 - - - - - - - - - - - - - - - - - - - - - - - 3.37 - - - - - - - - - - - - 3.05 - - - - - - - - - - - -
-0.05 0.6 2.32 2.65 1.6 -0.1 -0.01 - - - 0.94 - 0.51 -1.02 - - - - - 0.88 - -0.31 0.13 -2.66 -1.46 0.72 -0.34 0.26 -0.23 0.02 -0.82 0.95 -1.31 -1.83 -1.94 -0.3 0.88 0.75 -0.27 -1.98 0.95 -0.7 -0.85 -2.01 -0.6 0.57 -1.07 -0.47 - - -0.29 0.48 1.02 0.95
0.97 1.77 0.97 1.85 3.13 -0.53 0.35 -0.62 -0.08 -0.48 -1.36 -0.14 -1.83 -0.73 0.11 0.18 -0.13 -1.29 -1.1 -1.42 -1.84 0.2 -1.13 -1.63 -4.82 0.54 -4.75 -0.43 -1.76 -1.01 -4.2 0.34 -1.32 -1.04 -0.83 -5.22 1.63 1.1 2.26 -1.05 -2.75 -1.14 -0.81 -2.7 -0.59 -5.2 -0.46 -1.03 -1.19 -2.33 -3.48 -1.72 -1.51 -1.68
-3.47 -4.76 - -4.38 4.41 -0.26 -2.32 0.08 -0.12 -0.16 -0.35 0.94 -4.28 1.0 -5.44 -6.5 -5.36 - -1.74 1.45 1.02 -0.62 -6.42 -5.46 -5.69 -2.54 3.02 -4.37 -5.38 -5.79 -6.88 -3.16 -6.0 -6.87 -6.36 -4.01 -2.43 -2.28 -2.66 -3.2 -0.39 2.68 -4.96 -4.9 0.04 -1.64 -4.09 -4.83 -6.9 -8.05 -5.79 -7.59 -5.66 -5.03
- - - 4.44 2.6 - - - - - - - - - - - - - - - - - - - - - - - - 3.35 - - 2.04 - - - 2.98 2.01 - - - - - - - - - - - - - - - -
1.03 - - 5.32 1.64 - - - - - - - - - - - - - - - - - - - - - - - 0.94 - - - 0.68 - - - 1.48 - 1.44 - - - - - - - - - - - - - - -
0.93 - - 2.04 2.64 -0.91 0.35 - - - - - - - - 0.48 1.44 - - - - - -1.68 0.26 1.99 0.75 - 0.41 - -1.45 0.99 -0.7 1.53 1.06 -1.57 1.57 -0.84 1.04 0.23 -0.68 1.12 0.26 -1.86 0.46 -0.07 1.01 -0.83 - 0.06 -0.09 - - - 0.22
- -0.29 2.53 5.08 2.34 -9.1 - - - - - - -2.01 - - - - - - - - 2.18 -2.41 - - -2.56 -2.39 -3.86 -0.83 - - -2.95 -3.94 -3.87 - -2.83 -2.55 -0.72 -4.13 - - -1.72 - -3.81 -0.47 - - -3.06 - - - - - -
-0.11 1.65 2.46 3.91 3.62 -0.45 -0.58 -1.1 - - -0.81 -0.18 - -1.78 -0.76 -1.86 -1.88 - - - - -1.07 -3.1 -2.32 - 0.85 - -3.73 -2.62 - -2.74 0.43 -1.2 -3.69 -0.96 -0.14 -0.41 0.79 -0.02 -1.74 - -3.88 - - -1.23 -0.44 - -1.56 -2.75 -2.06 - - -1.63 -
0.19 - - 2.17 3.04 -0.04 -1.09 - -0.67 - -0.62 0.27 - 0.32 -1.35 0.04 -2.12 - 2.2 - - 2.05 -1.8 -1.78 -1.46 -0.04 -1.67 -1.24 -1.84 0.15 -3.24 -3.35 -1.41 -0.87 0.01 -1.66 1.17 0.39 1.22 0.74 -0.17 0.86 -0.3 -1.63 -0.3 -1.66 0.11 -1.25 -0.45 -0.57 -2.25 -0.46 -0.1 -0.31
1.29 - - 2.92 1.0 -0.78 2.16 - - - - - - -0.19 1.79 - - 2.89 - - - - 0.24 - - 0.35 0.34 - -0.74 0.93 -0.06 0.85 0.72 -1.1 -0.99 - - 0.28 -1.24 - -0.15 - - - 0.93 - 0.71 0.34 1.5 -0.23 - 0.03 -1.1 0.16
-1.6 -2.71 -2.32 3.68 1.07 0.16 -0.2 0.63 -0.22 1.28 0.31 -0.28 -0.58 -1.71 -1.3 -0.7 -2.82 -3.02 -0.66 0.76 -0.4 1.64 -1.34 -1.09 - -0.33 -1.0 -1.73 0.38 -1.36 -2.83 -0.38 -0.18 -0.48 -0.56 -1.49 -0.09 1.25 0.98 -0.36 -0.39 -1.27 -1.45 -1.51 -0.49 -0.93 -0.16 -0.41 -1.71 -1.65 -2.18 -1.07 -1.25 -0.41
-2.17 2.46 4.07 -2.7 4.47 -2.36 -2.92 -3.54 -3.01 -3.77 -2.41 -2.33 - -1.32 -6.23 -6.0 -6.19 -6.4 -3.04 -1.94 -2.19 2.36 -7.93 -5.31 -2.91 -4.9 -3.57 -6.97 -3.77 -5.13 -3.26 -6.52 -6.01 -4.76 -5.19 -6.41 -5.92 -3.39 -4.39 -3.2 -3.02 -1.73 -5.32 -1.97 -3.31 -3.29 -5.89 -5.0 -6.89 -6.03 - -5.17 -5.23 -7.78
-0.34 0.29 3.34 2.93 1.45 -0.32 - -0.99 -0.05 -1.17 0.26 1.48 -1.19 -1.71 - -1.84 -1.81 - 0.51 -1.37 - -1.0 -1.4 -3.04 -0.36 -1.12 -0.46 -0.84 -0.75 -1.28 -0.83 -1.95 -1.19 -1.76 - -0.83 0.83 0.67 -0.86 -0.69 1.27 -0.01 -0.77 1.22 -0.72 0.12 -1.63 -0.59 -3.46 -2.29 -2.1 - -0.44 -2.21
0.53 - -0.92 2.82 2.07 -0.12 -0.49 -1.04 -0.11 - 0.2 - - -0.95 -1.78 0.08 -1.87 0.56 -0.54 -1.48 -0.28 2.04 -0.51 - -1.68 0.8 0.49 -0.51 -0.29 -1.56 -0.03 -1.73 -1.65 -1.27 -2.7 -3.69 0.83 1.03 1.12 -0.11 -0.42 -0.22 -0.62 -0.38 -2.13 0.16 -0.38 -0.22 -1.42 -0.33 0.07 -0.29 0.35 0.6
1.81 - - 3.6 5.26 - - - - - - - -8.24 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - 4.61 4.29 0.31 1.42 - - - - - - 1.68 - - - - - - - - - - - 0.03 - - 0.94 - - - - - - - - - - - - - - - - - - - - - - - - -
-0.28 1.17 1.1 2.97 1.88 1.56 -5.09 0.12 1.46 1.21 0.46 0.07 1.71 1.69 -1.04 -0.6 -0.84 -1.26 -1.38 0.53 0.34 2.43 -2.62 -2.12 -3.73 -1.54 -1.25 -3.52 -2.37 -2.36 -2.78 -2.25 -1.19 -1.49 -0.82 - -1.05 -1.21 -1.34 -2.38 -2.43 -2.27 -0.71 -1.92 -1.08 -3.54 -3.13 -2.12 -2.27 -4.12 -1.52 -1.52 -2.21 -1.51
- - - 1.58 1.56 - - - - - - - - - - - - - - - - 5.32 - - - - - - 2.36 - - - - 1.63 - - - - - - - - - - - - - - - - - - - -
0.1 0.03 1.63 4.02 1.79 -0.57 -0.49 0.64 - 0.46 - - - - - - 0.82 - - - - - -0.83 -0.46 -1.55 1.69 -0.34 -1.81 -0.71 0.76 -1.8 - - - - - 0.44 -0.58 0.75 0.08 - 0.96 -0.19 - 0.38 - - -0.98 1.06 -0.97 0.36 -1.65 - -0.07
0.12 - - -1.25 5.67 -6.04 - - - - - - - -5.52 - - - - - - - - - - - - - - - -6.97 - 0.35 -3.6 - -5.87 - - -6.92 - - - -4.74 - - - - -7.14 - - - - - - -
-1.45 -3.63 0.33 1.96 0.4 0.13 -0.39 -3.08 -2.14 -2.31 -1.41 -2.19 -0.03 1.21 -0.45 -1.01 -1.15 -0.01 0.23 -0.68 -2.31 0.09 0.28 -0.33 0.52 -0.48 -0.37 0.26 0.27 -0.13 -0.14 -0.08 -0.68 -0.13 -0.04 0.1 0.79 -0.18 0.21 -0.31 0.14 -0.22 0.22 0.33 0.16 0.27 0.35 0.52 -0.16 -0.48 0.29 0.6 0.86 0.28
1.62 - - 2.05 3.24 0.01 - 3.43 - - - - - 3.3 - - - - - - - 3.42 - - - - - - 2.33 - - - - - - - - - - - - - - - - - - - - - - - - -
- - - 0.65 4.86 - - - - - - - - - - - - - - - - - 1.44 1.91 - 1.29 - - 1.7 - - 1.48 -0.67 -0.52 -0.37 - -0.71 0.49 - -0.39 -0.46 - - - - - - - - -0.77 - 1.21 - -
1.41 - 2.07 4.01 -0.26 0.33 - - - - - - - - - - - - - - - - - 0.12 1.02 0.85 - -0.42 - -0.48 3.26 - - - - 3.14 - 1.02 -0.6 - - - - - - - -0.7 - - - - - -0.12 -
- - - 5.21 4.09 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- -1.61 - 0.52 5.48 -6.63 -3.29 - - -1.07 - - - -3.61 - - - - - - -0.14 - -3.27 -2.03 - -0.16 - -3.12 -1.82 -1.48 - -1.36 -3.25 -1.61 -3.25 - -1.5 0.59 -2.51 -3.31 - -2.45 -2.61 - -3.36 - -2.43 -2.39 - - - -1.97 - -
-4.69 -3.46 1.9 0.47 5.59 -6.51 - - - - - - - -5.63 - - - - - - - - - -5.31 - -5.64 - -3.65 - - - - - -3.51 -3.53 - -5.82 - - - - - - - -3.96 - - - - -5.7 - - - -
-8.46 - -1.94 -3.91 5.66 -4.88 -3.67 -2.59 - -5.14 - -5.61 - -0.8 -7.96 - -8.15 -8.12 -1.78 -3.2 -3.92 -2.54 -9.27 - -9.38 -4.75 -0.59 -7.11 -8.3 -8.75 - -6.03 - -7.84 -9.9 -7.33 -4.37 -5.26 -4.93 -6.81 -10.04 -0.98 -6.92 - -2.4 -7.6 -9.07 -7.47 -8.13 -8.28 - -8.05 - -9.71
- - 3.29 3.85 4.73 - - - - - - - - - - - - - - - - - - - - -2.38 0.76 - - - - - - - - - -2.33 - -1.34 -1.2 - - -1.51 - - - - - - - - - - -
- - 2.65 3.55 2.89 - - - - - - - - - - - - - - - - - - - - 2.35 - 2.66 - - - - - - - - 3.19 2.37 - 1.53 - - - - - - - - - - - - - -
0.98 - - 4.05 5.06 - 0.54 - - - - - - - - - - - - - - - - - - - - - - - - - -0.73 - - - - - - - - - - - - - - - - - - - - -
1.77 - - 4.51 2.74 -1.9 - - - - - - - 0.28 - - - - - - - - -0.03 - - - - - 1.05 - 2.84 - - - - - 0.51 1.49 - - 0.66 - - - - 1.82 - - - - - - - -
-3.28 - 0.48 3.58 3.57 -0.8 0.65 - - - - - 1.41 0.1 - 0.5 - - - 1.87 1.25 0.49 0.52 -1.29 -1.2 -1.0 -1.63 -0.84 - - -0.83 0.21 -0.59 - - -0.19 -3.45 -3.31 -1.7 -3.16 0.37 -0.99 -2.48 - -2.22 -1.57 - - 0.72 -0.59 -2.18 -1.41 -0.72 -1.35
- - - 5.16 2.91 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.13 1.62 - - - - - - 1.67 - - - - - - - - -
- - 3.23 3.74 3.16 -1.72 - - - - - - - - - - - - - - - 1.24 - 0.17 - - - -1.14 - - - - -0.29 -1.22 0.38 - 3.05 0.21 1.16 -0.27 - 0.94 -0.47 - - - -1.36 - - - - - - -
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.