Heatmap: Cluster_49 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00071920 (evm_27.TU.AmTr_v1.0_scaffold00001.48)
- - - - - - - - -1.1 - - - - 0.72 0.06 - - - - - - 4.24
AMTR_s00001p00269160 (evm_27.TU.AmTr_v1.0_scaffold00001.432)
- - - - -0.36 - - - -3.33 - -2.1 -0.32 0.07 -3.34 -2.82 -0.89 - - - - - 4.19
AMTR_s00003p00199040 (evm_27.TU.AmTr_v1.0_scaffold00003.184)
- - - - - - - - - - - - - 2.75 - - - - - - - 3.93
AMTR_s00004p00120220 (evm_27.TU.AmTr_v1.0_scaffold00004.104)
- - - - 2.75 - - - - - - - - - - - - - - - - 3.93
AMTR_s00006p00253480 (evm_27.TU.AmTr_v1.0_scaffold00006.170)
- - - - 0.31 - - - - - - - - - - - - - - - - 4.38
AMTR_s00007p00187030 (evm_27.TU.AmTr_v1.0_scaffold00007.155)
- - - - -0.06 - - - - - - - - - - - - - - - - 4.4
AMTR_s00007p00187250 (evm_27.TU.AmTr_v1.0_scaffold00007.156)
- - - - -0.66 - - - - - - - - - - - - - - - - 4.42
AMTR_s00010p00134160 (evm_27.TU.AmTr_v1.0_scaffold00010.92)
-4.8 -3.03 -0.95 - -5.91 - -10.33 - -10.29 - 0.14 0.75 1.63 -0.44 -3.83 -2.69 0.45 -0.01 -0.7 -5.34 -4.95 3.52
AMTR_s00010p00174880 (evm_27.TU.AmTr_v1.0_scaffold00010.141)
- - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00010p00262920 (evm_27.TU.AmTr_v1.0_scaffold00010.481)
- - - - -3.86 - - - - - - -0.27 -0.83 -1.43 - - - - -1.44 - - 4.31
AMTR_s00010p00262960 (evm_27.TU.AmTr_v1.0_scaffold00010.482)
- - - - 0.43 - - - -4.24 - - - -0.31 -0.8 - - -0.81 0.13 - -2.21 - 4.12
AMTR_s00011p00191260 (evm_27.TU.AmTr_v1.0_scaffold00011.57)
- - - 0.17 1.99 - -2.93 - -1.86 - - 1.54 0.47 -2.94 0.85 - - - - - - 3.36
AMTR_s00017p00216620 (evm_27.TU.AmTr_v1.0_scaffold00017.151)
- - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00017p00216820 (evm_27.TU.AmTr_v1.0_scaffold00017.154)
- - - - 2.96 - - - 1.96 - - - - - - - - - - - - 3.37
AMTR_s00019p00186040 (evm_27.TU.AmTr_v1.0_scaffold00019.202)
- - - - 1.5 - - - - - - - - - -1.39 - - - - -1.33 - 4.2
AMTR_s00019p00191440 (evm_27.TU.AmTr_v1.0_scaffold00019.212)
- - - - -4.65 - -5.9 - - - -1.0 -2.23 -2.64 - - -0.79 1.57 -2.42 -3.4 - -2.58 4.09
AMTR_s00019p00228440 (evm_27.TU.AmTr_v1.0_scaffold00019.301)
- - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00020p00199840 (evm_27.TU.AmTr_v1.0_scaffold00020.81)
-1.05 - - - -0.64 - -5.59 - -4.57 -3.48 - -0.56 -3.16 0.76 -2.02 - - - - - - 4.17
AMTR_s00022p00208150 (evm_27.TU.AmTr_v1.0_scaffold00022.246)
- - - - 1.17 - - - -0.96 -1.88 - - - - - - - - - - - 4.25
AMTR_s00023p00172000 (evm_27.TU.AmTr_v1.0_scaffold00023.106)
- - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00029p00225270 (evm_27.TU.AmTr_v1.0_scaffold00029.349)
- - - - 0.77 - - - - - - - -0.59 - -1.93 - 1.25 - - - 2.4 3.55
AMTR_s00038p00095360 (evm_27.TU.AmTr_v1.0_scaffold00038.47)
- - - - - - 0.78 - - - - - - - - - - - - - - 4.34
AMTR_s00038p00189160 (evm_27.TU.AmTr_v1.0_scaffold00038.132)
- - - - 1.6 - -5.99 - - - -2.98 1.12 0.79 -2.98 -0.29 -0.76 -2.18 - - - - 3.72
AMTR_s00038p00220010 (evm_27.TU.AmTr_v1.0_scaffold00038.187)
- - - - 0.06 - - - - - - - - - - - - - - - - 4.39
AMTR_s00038p00220100 (evm_27.TU.AmTr_v1.0_scaffold00038.189)
- - - - -0.45 - - - - - - - - - -2.13 - - - - - - 4.4
AMTR_s00038p00223560 (evm_27.TU.AmTr_v1.0_scaffold00038.202)
- - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00038p00224660 (evm_27.TU.AmTr_v1.0_scaffold00038.206)
- - - - 2.88 - - - - - - - - - - - - - - - - 3.87
AMTR_s00038p00226530 (evm_27.TU.AmTr_v1.0_scaffold00038.212)
- - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00038p00230180 (evm_27.TU.AmTr_v1.0_scaffold00038.225)
- - - - 0.44 - - - - - - - - - - - - - - 1.18 - 4.2
AMTR_s00038p00233560 (evm_27.TU.AmTr_v1.0_scaffold00038.232)
- - - - 2.16 - - - - -0.2 - - - - - - - - - - - 4.06
AMTR_s00039p00172240 (evm_27.TU.AmTr_v1.0_scaffold00039.132)
- - - - - - - - - - - - 0.34 -0.08 - - - - - - - 4.31
AMTR_s00041p00177760 (evm_27.TU.AmTr_v1.0_scaffold00041.139)
- - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00041p00210600 (evm_27.TU.AmTr_v1.0_scaffold00041.213)
- - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00041p00216070 (evm_27.TU.AmTr_v1.0_scaffold00041.233)
- - - - 1.66 - - - - - - - - - - - - - - - - 4.24
AMTR_s00044p00129040 (evm_27.TU.AmTr_v1.0_scaffold00044.115)
- - - - 2.82 - 1.58 - -1.89 0.5 - - - -1.32 0.87 - - - - -1.31 - 2.93
AMTR_s00044p00222620 (evm_27.TU.AmTr_v1.0_scaffold00044.240)
- - - - - - - - - - - - 0.81 - - - - - - - - 4.34
AMTR_s00047p00229330 (evm_27.TU.AmTr_v1.0_scaffold00047.192)
- - - - 1.73 - - - - - - - - - - - - - - - - 4.22
AMTR_s00048p00147210 (evm_27.TU.AmTr_v1.0_scaffold00048.96)
- - - - 3.21 - - - - - - - - - - - - - - - - 3.67
AMTR_s00056p00025580 (evm_27.TU.AmTr_v1.0_scaffold00056.10)
- - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00057p00216330 (evm_27.TU.AmTr_v1.0_scaffold00057.274)
- - - - -1.85 - - - - - -3.65 1.71 -3.24 -6.75 -4.34 - -3.01 - 2.71 -6.15 - 3.53
AMTR_s00059p00097720 (evm_27.TU.AmTr_v1.0_scaffold00059.71)
- - - - 1.43 - - - - - - - - - - - - - - - - 4.27
AMTR_s00060p00123390 (evm_27.TU.AmTr_v1.0_scaffold00060.60)
- - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00065p00015770 (evm_27.TU.AmTr_v1.0_scaffold00065.2)
- - - - - - - - - - - - 0.52 - - - - - - - - 4.36
AMTR_s00066p00140840 (evm_27.TU.AmTr_v1.0_scaffold00066.139)
- - - - -0.11 - - - - - 0.5 - 0.17 - - - -1.78 - -1.0 - 1.01 3.98
AMTR_s00066p00183410 (evm_27.TU.AmTr_v1.0_scaffold00066.230)
- - - - 1.77 - - - -1.07 -0.22 - - - - -1.31 - 2.24 - - - - 3.6
AMTR_s00069p00178570 (evm_27.TU.AmTr_v1.0_scaffold00069.164)
- - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00074p00156530 (evm_27.TU.AmTr_v1.0_scaffold00074.70)
- - - - 1.8 - - - - - - - - 0.86 -1.93 - - - - - - 4.04
AMTR_s00077p00080580 (evm_27.TU.AmTr_v1.0_scaffold00077.61)
- - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00081p00101860 (evm_27.TU.AmTr_v1.0_scaffold00081.35)
0.92 1.47 - -7.13 -0.01 - - - -8.34 -8.75 -1.83 0.35 1.02 -3.74 -1.63 -1.71 -4.13 -3.93 -2.95 -5.32 - 3.56
AMTR_s00081p00151270 (evm_27.TU.AmTr_v1.0_scaffold00081.61)
- - - - -0.0 - - - - -3.53 - - -1.8 -0.25 -1.77 - - - - -3.08 - 4.28
AMTR_s00085p00167610 (evm_27.TU.AmTr_v1.0_scaffold00085.105)
- - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00088p00176420 (evm_27.TU.AmTr_v1.0_scaffold00088.154)
- - - - -0.69 - -6.29 - -4.51 -4.99 -0.21 0.73 -0.46 -2.57 -1.77 -0.16 0.86 -0.78 0.17 -0.61 -0.36 3.55
AMTR_s00102p00044660 (evm_27.TU.AmTr_v1.0_scaffold00102.15)
- - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00106p00077160 (evm_27.TU.AmTr_v1.0_scaffold00106.49)
- 2.29 - - 0.16 - - - -5.42 -6.28 - -1.92 -1.32 -0.64 -0.88 - - - -3.09 -5.82 - 3.8
AMTR_s00111p00134440 (evm_27.TU.AmTr_v1.0_scaffold00111.111)
- - - - 2.23 - -0.32 - 0.49 -0.3 - - -2.73 -0.48 -0.31 - - - - - - 3.66
AMTR_s00117p00128220 (evm_27.TU.AmTr_v1.0_scaffold00117.57)
- - - - -0.7 - - - - - - - - -0.42 - - - - 2.79 -0.02 - 3.67
AMTR_s00121p00137080 (evm_27.TU.AmTr_v1.0_scaffold00121.47)
- - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00154p00066430 (evm_27.TU.AmTr_v1.0_scaffold00154.44)
- - - - - - - - - 2.71 - - - - - - - - - - - 3.95
AMTR_s00155p00049720 (evm_27.TU.AmTr_v1.0_scaffold00155.23)
- - - -2.81 0.71 - -3.52 - - -3.39 - 1.07 1.95 -1.16 - - - - - - - 3.77
AMTR_s00157p00085110 (evm_27.TU.AmTr_v1.0_scaffold00157.46)
3.05 - - - -0.46 - - - - - - - 1.42 0.81 -5.32 - -2.49 - - - - 3.06
AMTR_s00157p00088030 (evm_27.TU.AmTr_v1.0_scaffold00157.48)
-2.64 - - - -2.2 - - - - - - - -2.15 1.79 -4.01 - - - - - - 4.16
AMTR_s00169p00032570 (evm_27.TU.AmTr_v1.0_scaffold00169.15)
- - - - -0.71 - -7.49 - - - -0.18 -1.24 0.01 1.37 0.54 - -5.96 - - - - 3.91
AMTR_s00171p00043380 (evm_27.TU.AmTr_v1.0_scaffold00171.21)
- - - - 0.45 - - - -2.53 -2.34 - - 0.77 -0.48 -1.42 - - - - -1.86 1.95 3.74
AMTR_s00174p00029080 (evm_27.TU.AmTr_v1.0_scaffold00174.10)
- - - - - - -6.32 - -6.92 -2.1 - - 0.08 1.24 -6.86 2.27 - -2.0 0.56 - 0.43 3.38
AMTR_s00203p00038060 (evm_27.TU.AmTr_v1.0_scaffold00203.17)
- - - - 1.01 - - - - - - - -3.2 -2.77 -3.91 - - - - - - 4.3
AMTR_s00213p00019970 (evm_27.TU.AmTr_v1.0_scaffold00213.5)
- - - - 0.23 - -4.03 - -2.61 -2.94 - - 0.69 1.95 -0.66 - 1.98 - - 1.56 - 2.9
AMTR_s00391p00013690 (evm_27.TU.AmTr_v1.0_scaffold00391.3)
- - - - - - - - - - - - 1.67 - - - - - - - - 4.23
AMTR_s00499p00005050 (evm_27.TU.AmTr_v1.0_scaffold00499.1)
- - - - 0.52 - - - - - - - -1.58 - -0.67 - - - - - - 4.29
AMTR_s00913p00010900 (evm_27.TU.AmTr_v1.0_scaffold00913.2)
- - - - 2.06 - - - - - - - - - - - - - - - - 4.16
AMTR_s01592p00005990 (evm_27.TU.AmTr_v1.0_scaffold01592.1)
- - - - - - 2.45 - 0.24 1.03 - - - - -0.04 - - - - - - 3.62

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.