Heatmap: Cluster_478 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Cambium and expanding xylem
Cambium
Expanding xylem
Expanding and mature xylem
Maturing xylem
Maturing xylem and dead early wood
Wood
Dead early and late wood
Dead early wood
Dead late wood
Vegetative shoots - needles
Vegetative shoots - stem
Vegetative shoots
Girdled twig - stem
Dried twig - needles
Girdled twig - needles
Needles
Needles - dawn
Needles - later afternoon
Needles - midday
Needles - night
Buds
Female flower
Male flower
Pineapple galls
Somatic germinants - abnormal type
Somatic germinants - normal type
Cell culture - H20 - 5 days
Cell culture - KI added - 5 days
Cell culture - KI added - 20 days
Cell culture - KI removed - 4 days
Cell culture - KI removed - 12 days
Cell culture - solid medium
-1.14 -1.07 -0.72 -1.15 -1.08 -0.74 -3.89 -0.68 -0.71 0.24 1.08 -2.49 -1.5 -2.74 -0.5 0.35 1.24 1.48 1.15 1.11 1.15 -2.98 -2.4 -4.8 -1.02 0.57 0.73 0.18 0.22 0.26 0.06 0.27 0.23
-1.65 -1.57 -1.82 -2.3 -1.97 -1.78 -1.46 -1.04 -1.61 -1.87 0.43 -0.63 -1.17 -2.11 -0.04 0.26 1.32 0.97 1.6 1.31 1.53 -1.53 -0.82 -1.25 -0.09 0.78 1.02 -0.1 -0.19 -0.05 -0.24 -0.03 0.63
-7.14 -8.8 -6.6 -9.62 -7.05 -6.23 -5.32 -7.72 - -7.2 1.11 -2.95 0.71 - -0.09 1.18 2.11 1.34 1.51 1.05 1.31 -3.19 -1.4 -2.45 -0.22 0.61 1.04 -0.54 -0.27 0.55 0.11 0.31 0.2
-5.07 -4.21 -6.1 -5.38 -5.15 -2.69 -2.79 -2.42 -3.47 -1.06 1.31 -1.8 -1.39 -1.24 0.04 0.62 1.5 1.62 1.49 1.42 1.71 -2.72 -2.23 -2.04 -1.56 0.73 0.69 0.1 0.51 0.31 -0.02 -0.09 0.16
-1.42 -1.68 -1.26 -0.75 -0.93 -0.31 -2.09 -1.44 -0.79 -0.84 0.71 -1.32 0.0 -1.14 -0.15 0.33 1.2 0.95 0.74 0.48 0.81 -1.28 -1.08 -2.12 0.71 0.22 0.68 0.15 0.47 0.72 0.26 0.21 0.6
-2.62 -2.17 -3.85 -2.41 -2.86 -3.89 -1.77 -2.54 -3.74 -2.64 1.02 -0.6 -0.17 -0.9 -0.8 0.79 1.52 1.62 1.66 1.0 1.31 -0.97 -0.92 -1.82 -0.1 0.41 0.75 -0.38 0.03 0.37 -0.13 0.02 0.22
-2.35 -0.67 -1.23 -1.67 -1.42 -1.11 -2.27 -1.43 -1.29 -1.36 0.87 -0.3 -0.07 -0.71 -0.27 0.47 1.33 0.9 0.88 0.51 0.67 -1.09 -0.83 -1.27 0.61 0.36 0.79 0.14 0.24 0.54 0.24 0.48 0.37
-1.96 -2.6 -2.13 -2.27 -2.87 -2.42 -4.5 -2.17 -2.76 -2.59 1.57 -3.32 -0.89 -5.01 0.7 0.67 1.91 1.62 1.44 1.25 1.33 -3.93 -2.76 -5.06 -0.1 0.51 0.88 -0.62 -0.21 0.02 -0.61 -0.17 0.52
-5.2 -5.51 -6.05 -6.28 -5.53 -5.6 -3.73 -6.24 -6.73 -5.67 1.25 -1.96 1.17 -2.32 -2.07 0.52 1.96 0.97 1.38 0.97 1.31 -2.06 -1.85 -2.29 0.78 0.69 1.04 -0.04 0.04 0.5 0.25 0.38 0.11
-5.49 -5.31 - -7.13 -8.58 -4.76 -4.58 - -5.38 - 1.63 -2.59 -0.08 -1.81 -2.91 0.66 1.82 1.24 1.89 1.48 1.58 -2.26 -1.36 -1.16 0.02 0.33 0.73 -0.19 0.08 0.29 -0.1 -0.12 0.35
-1.43 -1.12 -1.69 -1.41 -1.21 -1.9 -1.02 -2.64 -2.15 -1.58 0.64 0.22 -0.61 0.24 0.9 0.57 0.95 1.0 0.73 1.16 0.97 -0.54 -0.45 -1.07 -0.01 0.53 0.73 -0.39 -0.04 0.2 -0.05 0.2 -0.16
-1.75 -1.49 -1.94 -1.71 -1.7 -0.96 -2.69 -1.75 -1.22 -1.02 1.42 -0.86 -0.22 -1.33 -0.26 0.12 1.3 1.3 1.18 0.97 1.13 -1.47 -1.2 -0.97 0.05 0.83 1.08 -0.1 -0.14 0.04 -0.27 -0.23 0.08
-8.32 -5.83 -9.44 -9.31 -6.94 -6.15 -5.57 -8.21 -8.2 -6.92 0.66 -0.71 0.19 -0.68 1.06 1.38 1.49 1.36 1.62 1.32 1.62 -2.31 -1.55 -3.06 0.11 0.51 1.05 -1.02 -0.62 -0.12 -0.1 0.21 -0.22
-3.45 -3.45 -4.25 -4.2 -3.93 -3.17 -3.82 -3.81 -3.53 -2.79 1.31 -1.86 0.87 -1.8 -0.79 0.75 2.04 1.28 1.29 0.94 1.28 -2.31 -1.22 -2.29 0.68 0.67 1.11 -0.42 -0.33 0.18 -0.34 -0.3 0.29
-1.22 -1.85 -0.75 -0.68 -0.63 -0.56 -1.03 -1.35 -1.37 -1.23 0.14 0.14 0.5 -0.08 0.44 -0.26 1.39 -0.03 0.02 -0.15 0.01 -0.04 0.76 -0.91 0.41 0.71 0.88 0.34 -0.12 0.24 0.13 0.02 0.37
-0.29 0.11 -1.13 -0.64 -1.62 -0.71 -1.59 -1.18 -1.03 -1.0 0.94 -1.33 0.24 -1.65 0.48 0.38 1.35 0.91 0.85 0.93 1.03 -1.06 -1.24 -1.9 0.46 0.55 0.79 -1.29 -0.24 0.39 -0.79 -0.95 0.29
-4.66 -3.92 -5.27 -4.65 -5.33 -3.7 -2.47 -4.7 -6.01 -5.87 1.37 -0.23 0.1 -1.13 -0.79 0.89 1.36 1.35 1.52 1.1 1.37 -0.89 -0.72 -0.8 0.23 0.09 0.43 0.3 0.1 0.22 0.4 0.39 -0.06
-4.85 -4.78 -7.98 -5.2 -7.32 -7.64 -1.77 -6.54 -7.76 -8.31 0.78 -0.5 -0.32 -0.39 0.83 0.81 1.45 0.55 1.24 1.18 1.33 -0.34 -0.09 -1.47 -0.09 0.56 0.76 0.04 0.12 0.53 0.1 0.33 0.71
-2.49 -2.22 -3.8 -2.89 -3.55 -3.45 -1.44 -4.41 -4.85 -5.05 0.84 -1.34 -0.15 -1.33 0.61 0.83 1.18 1.03 1.35 1.41 1.33 -0.56 0.01 -1.28 -0.19 0.67 0.8 -0.1 0.28 0.23 0.17 0.26 -0.06
-1.3 -1.63 -1.61 -1.88 -1.41 -1.6 -2.4 -2.08 -2.0 -2.53 1.03 -1.49 0.28 -1.34 0.57 0.59 1.07 1.06 1.27 1.16 1.03 -2.01 -1.04 -1.75 0.07 0.63 0.86 -0.19 0.14 0.29 -0.06 0.18 0.58
-0.16 -0.39 -0.61 -0.77 -0.92 -1.38 -1.62 -0.8 -1.26 -1.02 0.86 -1.8 -0.63 -1.36 0.46 0.25 1.38 0.78 1.04 0.69 0.96 -1.47 -0.65 -1.44 -0.46 0.5 0.75 -0.08 0.4 0.34 -0.08 -0.1 0.18
-0.77 -0.91 -1.36 -1.9 -1.7 -1.8 -0.67 -1.61 -1.57 -1.25 0.85 -1.37 0.18 -0.67 -0.26 0.19 1.15 0.84 0.82 0.83 0.81 -0.42 -0.31 -0.71 0.15 0.69 0.77 0.22 0.31 0.23 0.21 0.33 0.13
-2.85 -2.95 -3.39 -3.3 -2.94 -3.11 -1.7 -3.16 -3.73 -2.31 0.58 -0.17 -0.15 -0.47 0.73 0.77 1.38 0.92 0.93 1.17 1.09 -0.38 -0.04 -1.17 0.1 0.8 1.05 -0.31 -0.04 0.24 0.01 -0.03 0.5
-3.86 -1.87 -3.68 -2.21 -2.55 -3.33 -2.86 -3.33 -2.38 -2.39 1.15 -1.21 -0.01 -0.87 0.67 0.58 1.5 0.81 0.77 0.59 1.19 -0.82 -0.89 -1.36 -1.5 0.85 1.0 0.29 0.56 0.67 0.44 0.07 0.82
-1.45 -1.0 -1.31 -1.94 -1.14 -0.75 -1.6 -1.08 -1.1 -1.52 0.9 -0.88 -0.08 -0.86 0.43 0.61 1.03 1.23 1.18 1.15 1.32 -1.32 -0.5 -1.68 -0.02 0.61 0.67 -0.36 -0.14 -0.19 -0.25 -0.5 0.02
-1.9 -2.95 -1.88 -2.72 -2.44 -1.71 -1.48 -1.72 -2.25 -1.57 0.68 -0.28 0.84 -0.02 0.31 0.73 0.88 0.72 1.07 0.7 0.7 -0.68 -0.04 -1.29 0.2 0.68 0.86 0.04 0.01 0.39 0.39 0.29 0.14
-0.54 -0.42 -1.12 -1.28 -1.51 -1.21 -1.5 -1.31 -1.15 -1.07 0.53 -0.98 -0.28 -0.79 0.08 0.3 1.3 1.15 1.0 0.81 1.16 -1.22 -0.58 -1.29 -0.61 0.71 0.79 -0.01 0.05 0.2 0.02 0.06 0.19
-2.61 -3.3 -3.92 -4.17 -6.05 - -2.63 -5.38 -6.6 -4.76 0.86 -1.92 0.2 -2.16 0.46 1.14 1.53 1.26 1.33 0.98 1.35 -1.62 -0.67 -2.02 -0.01 0.29 0.73 -0.08 0.35 0.81 0.43 0.27 0.51
-2.23 -1.91 -1.85 -1.68 -1.15 -1.22 -2.85 -0.91 -1.69 -1.53 0.02 -1.95 0.54 -1.79 -0.98 -0.3 1.69 -0.16 0.28 0.21 0.41 -1.65 -0.52 -1.14 -0.09 0.6 0.9 0.36 0.91 1.57 0.61 0.64 1.35
-1.88 -2.22 -3.62 -2.25 -2.98 -3.73 -1.62 -4.08 -3.64 -4.4 0.12 -0.74 -0.5 -0.6 -0.19 -0.14 1.8 1.15 0.86 1.0 1.18 -1.33 -0.56 -2.66 -0.4 0.81 1.1 0.28 0.56 0.76 0.49 0.73 0.67
-1.6 -2.52 -1.67 -1.93 -2.18 -1.66 -2.06 -4.44 -3.19 -3.43 0.51 -0.44 -0.62 0.69 0.73 0.85 1.88 1.53 0.54 1.17 0.56 -0.61 -0.64 -1.87 -0.74 0.66 1.0 -0.8 0.02 0.23 -0.04 0.14 -0.6
-0.4 -0.43 -0.43 -0.67 -0.65 -0.62 -1.01 -0.53 -1.02 -0.77 0.65 -0.63 0.58 -0.87 -0.17 0.35 1.14 0.56 0.61 0.06 0.53 -0.45 0.05 -0.35 0.09 0.62 0.78 -0.19 0.01 0.07 -0.21 -0.38 0.05
-4.67 -4.25 -4.6 -5.06 -4.46 -2.73 - -4.0 -6.68 - 1.65 -2.0 -1.32 - 1.1 0.6 1.26 2.3 1.89 1.87 1.95 -2.22 -5.87 -6.0 -0.83 0.58 0.7 -1.7 -2.03 -1.29 -1.73 -1.22 -0.09
-0.96 -1.65 -1.31 -2.54 -1.03 -1.27 -0.86 -0.74 -0.47 -0.67 0.77 -0.23 -0.52 -0.48 0.57 0.44 0.82 1.17 0.88 1.2 1.0 -0.68 -0.6 -2.03 0.07 0.34 0.39 -0.04 -0.08 0.04 -0.04 0.01 0.16
- - - - - - -8.26 - -6.14 - 1.21 -0.53 0.89 -0.91 0.08 0.43 1.59 1.12 1.12 1.03 1.21 -1.06 -0.99 -1.23 1.07 0.61 0.72 0.33 -0.03 0.19 0.48 0.21 -0.2
-0.89 -1.39 -0.86 -1.15 -0.61 -1.14 -1.36 -0.55 -0.85 -0.87 0.92 -0.67 0.02 -1.06 0.21 0.58 1.28 0.81 0.78 0.59 0.84 -0.92 -1.16 -1.03 -0.21 0.7 0.99 -0.16 -0.27 -0.08 -0.09 0.25 0.25
-6.28 -3.7 -6.57 -5.71 -6.15 -4.82 -5.27 -4.61 -5.36 -6.41 0.99 -0.9 0.16 -1.15 0.83 1.26 1.36 1.75 1.58 1.58 1.39 -2.3 -1.3 -3.45 0.72 -0.07 0.39 -0.68 -0.72 -0.06 -0.26 0.42 -0.04
-2.23 -2.59 -1.77 -1.59 -1.79 -1.4 -4.15 -2.21 -1.37 -1.99 1.3 -1.98 -0.47 -2.43 -0.97 0.24 2.0 1.37 1.44 1.15 1.47 -3.62 -2.44 -3.34 0.14 0.77 1.0 -0.67 -0.55 0.32 -0.34 -0.01 0.4
-5.93 -4.63 -8.68 - -5.18 -5.17 -4.54 -6.21 -3.84 -5.58 1.38 -3.88 -0.71 -2.87 -1.19 -0.01 1.84 1.3 1.71 1.11 1.43 -3.48 -2.59 -3.97 -0.86 0.66 0.93 0.15 0.33 0.91 0.57 0.92 0.79
-1.52 -1.32 -1.37 -1.23 -1.86 -1.27 -2.26 -1.75 -1.92 -1.3 0.33 -1.18 0.03 -1.03 0.86 0.87 1.09 0.89 1.42 1.4 1.38 -1.71 -0.67 -3.3 -0.0 0.99 0.96 -0.72 -0.74 -0.06 -0.26 -0.03 -0.19
-5.64 -4.56 -6.74 - -6.98 -3.67 -1.99 -6.19 -6.34 - 0.55 -0.85 0.05 -0.17 -0.39 0.66 1.56 1.08 1.23 1.25 1.19 -0.31 -0.04 -2.32 -0.13 0.5 0.95 -0.11 0.5 0.6 0.26 0.73 0.33
-6.18 -5.56 - - -5.12 - -5.53 - - - 1.66 -0.81 0.38 -0.67 -0.77 1.57 1.69 1.4 1.3 0.87 0.94 -2.6 -0.74 -2.92 1.56 0.31 0.59 -0.59 0.41 0.19 -1.1 -1.45 0.13
- -7.3 -11.52 -8.38 -10.67 - -6.47 - - -5.48 1.56 -1.49 0.96 -1.62 -0.72 0.69 1.99 0.96 1.19 1.0 1.27 -1.77 -0.87 -2.4 0.96 1.13 1.35 -0.65 -0.42 -0.02 -0.56 -0.21 -0.12
-2.38 -2.53 -3.09 -3.6 -2.97 -3.01 -2.96 -4.99 -3.97 -5.11 1.23 -0.93 1.0 -1.62 -0.35 0.64 1.74 0.56 1.28 0.97 1.09 -0.8 -0.05 -2.52 0.78 1.17 1.3 -0.88 -0.24 0.26 -0.7 -0.26 -0.16
-1.22 -1.42 -0.86 -1.23 -1.2 -0.14 -1.82 -0.93 -0.84 0.01 1.0 -0.55 -0.55 -0.37 -0.44 0.65 1.04 0.95 1.23 0.92 1.15 -1.19 -1.25 -1.94 0.15 0.06 0.31 -0.04 -0.07 0.31 -0.11 -0.22 0.22
-1.53 -0.94 -1.89 -1.8 -1.9 -0.89 -2.01 -1.58 -1.42 -1.28 1.13 -0.98 0.42 -1.13 0.36 0.56 1.02 1.2 0.77 0.76 0.8 -1.16 -0.87 -2.14 0.64 0.19 0.53 -0.34 -0.11 0.56 0.33 0.58 0.45
- - - - - - - - - - 1.88 -2.7 0.45 -2.6 -4.01 -0.38 2.9 1.18 1.03 0.67 0.97 -1.88 -0.44 -6.85 0.41 1.67 2.43 -3.85 -4.24 -2.51 -6.19 -2.77 -3.3
-1.01 -0.82 -1.63 -1.61 -1.89 -1.21 -2.28 -1.85 -1.67 -1.32 0.95 -2.02 -0.04 -3.08 0.68 0.3 1.29 1.3 1.08 1.03 1.4 -2.19 -1.55 -3.48 -0.03 0.33 0.64 -0.1 0.1 0.27 0.21 0.26 0.65
-0.93 -1.04 -1.38 -1.56 -1.49 -1.62 -0.48 -1.72 -1.77 -1.76 0.6 -0.27 0.28 0.11 0.02 0.44 0.81 0.9 0.88 0.82 0.92 -0.29 0.2 -0.54 -0.1 0.49 0.6 -0.13 0.23 0.28 -0.06 -0.17 0.22
-0.77 -0.68 -0.8 -0.6 -0.93 -0.93 -1.79 -1.22 -1.19 -1.25 1.06 -0.46 -0.09 -0.58 0.03 0.64 1.41 1.1 0.98 0.55 0.94 -1.15 -1.38 -1.09 -0.13 0.15 0.27 -0.33 0.21 0.32 -0.14 -0.16 0.31
-1.66 -1.38 -1.79 -1.73 -1.28 -0.29 -1.55 -1.19 -0.99 -1.83 1.1 -1.08 -0.44 -0.71 0.49 0.98 1.44 1.11 0.95 1.03 0.93 -0.82 -1.41 -1.9 -0.36 0.48 0.81 -0.18 -0.26 0.02 -0.08 -0.19 0.19
-2.13 -2.25 -2.26 -2.38 -2.72 -2.4 -5.11 -2.52 -2.71 -2.11 1.4 -2.6 -0.62 -2.85 0.63 0.6 1.49 1.53 1.51 1.3 1.56 -3.18 -2.17 -3.07 0.11 0.86 1.08 -0.93 -0.69 0.09 -0.37 -0.02 0.24
-2.35 -1.85 -3.17 -3.15 -3.49 -2.79 -1.33 -3.11 -3.67 -3.26 0.92 -1.12 0.56 -0.55 0.48 0.8 1.26 1.2 1.28 1.16 1.18 -0.48 -0.64 -1.41 -0.22 0.6 0.83 -0.48 0.04 0.49 -0.26 0.09 0.23
- - -7.65 - -7.38 - -0.27 -5.93 -7.01 - -1.02 0.68 0.24 0.46 -3.76 -1.58 2.29 -6.01 -2.65 -3.0 -1.9 0.05 0.84 -1.33 0.42 1.27 1.49 -0.7 0.51 1.95 0.44 1.01 1.36
-2.14 -2.65 -2.4 -1.45 -2.07 -1.5 -4.83 -2.19 -1.19 -2.96 1.68 -4.55 -1.67 -1.57 0.59 0.89 1.52 2.03 1.44 1.63 1.71 -2.44 -3.66 -2.92 -0.92 0.7 1.0 -1.7 -1.23 -1.09 -1.24 -1.35 -0.35
-1.36 -1.55 -1.06 -1.41 -0.91 -1.0 -2.09 -1.24 -1.29 -1.68 1.15 -1.06 -0.23 -1.53 0.76 0.37 1.06 1.33 1.09 0.92 1.21 -1.66 -1.33 -2.54 0.09 0.12 0.29 0.01 0.16 0.39 0.2 0.17 0.3
-2.98 -3.36 -3.32 -3.28 -2.79 -3.4 -0.56 -3.0 -5.16 -3.03 0.61 -0.56 1.17 -0.6 0.44 0.98 2.17 1.15 0.71 0.43 0.31 -0.96 -0.91 -0.18 0.51 0.59 0.84 -0.25 0.07 -0.11 -0.24 -0.48 -0.09
-1.15 -1.14 -1.24 -1.0 -1.1 -0.79 -2.53 -1.18 -1.03 -1.73 1.25 -1.39 -0.71 -1.79 -0.81 0.18 1.32 1.46 1.39 0.77 1.42 -1.74 -1.15 -3.06 0.48 0.23 0.63 -0.06 -0.01 0.25 -0.05 -0.18 0.18
-0.88 -1.15 -1.67 -1.76 -1.8 -1.54 -3.06 -1.0 -1.25 -1.58 0.96 -1.54 -1.38 -2.44 0.69 -0.0 1.94 1.02 1.32 0.98 1.04 -2.89 -2.26 -3.33 -1.03 1.31 1.58 -0.68 -0.66 -0.14 -0.32 -0.06 0.29
-0.74 -1.1 -1.28 -1.69 -1.46 -1.13 -2.28 -1.04 -1.03 -0.49 1.18 -0.87 0.41 -1.37 -1.24 0.16 1.49 0.94 1.17 0.81 1.18 -1.2 -0.78 -2.3 0.56 0.66 0.86 -0.62 -0.38 0.3 -0.47 -0.29 0.22
- - -11.66 -13.58 -9.1 - -9.88 -6.86 -6.41 -5.92 1.1 -2.03 0.93 -3.1 -1.1 0.03 2.13 0.82 1.21 1.01 0.89 -2.84 -0.62 -2.42 1.09 1.36 1.7 -0.5 -0.36 0.33 -0.18 0.02 0.24
-0.84 -1.01 -1.52 -2.52 -2.2 -1.79 -1.21 -2.17 -1.85 -1.05 0.87 -1.42 -0.14 -1.61 -0.15 1.08 1.06 1.61 1.11 1.07 1.16 -1.75 -0.63 -3.25 -0.48 0.47 0.91 -0.42 0.32 0.33 -0.03 0.21 -0.03
-1.38 -1.02 -1.53 -1.45 -1.52 -0.95 -2.02 -0.88 -1.29 -1.62 0.92 -1.26 -0.93 -0.95 0.61 0.39 0.91 1.52 1.06 0.74 1.14 -1.36 -0.86 -1.97 -0.58 0.36 0.53 0.03 0.29 0.58 0.23 0.5 0.28

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.