Heatmap: Cluster_164 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00271900 (evm_27.TU.AmTr_v1.0_scaffold00001.500)
1.33 1.55 2.05 1.67 -1.73 -5.07 -1.39 -10.11 -2.67 -2.16 -0.54 -1.3 -0.99 -0.62 -0.95 -1.53 -1.51 -1.45 -0.58 1.33 -0.55 -1.18
AMTR_s00003p00240920 (evm_27.TU.AmTr_v1.0_scaffold00003.255)
1.45 - 2.58 0.91 -1.71 -5.07 -7.06 - -9.62 -7.41 -1.19 -1.09 -0.57 1.07 0.76 -2.57 -1.46 -3.37 -1.88 1.63 -1.27 0.33
AMTR_s00009p00238880 (evm_27.TU.AmTr_v1.0_scaffold00009.204)
- - - 0.75 -1.24 - - - -3.77 -5.6 0.44 0.2 -1.36 -0.35 0.04 0.64 1.65 0.01 0.32 -0.15 2.66 -0.13
AMTR_s00019p00178350 (evm_27.TU.AmTr_v1.0_scaffold00019.180)
-0.46 - - -0.71 0.59 - -0.79 -6.0 -0.78 -0.65 0.11 0.04 0.54 0.23 0.43 -0.75 -0.4 -1.38 0.08 2.75 -0.12 -0.26
AMTR_s00019p00227670 (evm_27.TU.AmTr_v1.0_scaffold00019.296)
- - - - - - - - 2.02 1.85 - - - - - - - - - 3.47 - 1.7
AMTR_s00025p00066690 (evm_27.TU.AmTr_v1.0_scaffold00025.45)
- - - 1.61 -0.23 - -5.21 - -2.65 -2.98 -1.01 -1.2 -1.15 2.18 0.33 -2.76 -3.34 - -1.78 2.55 1.7 -0.03
AMTR_s00027p00229670 (evm_27.TU.AmTr_v1.0_scaffold00027.106)
- - - - -0.13 - - - - - - - - 1.22 2.11 - - - - 3.85 - -
AMTR_s00028p00150530 (evm_27.TU.AmTr_v1.0_scaffold00028.55)
- - - - -1.94 - - - - - 2.65 - -1.99 -2.29 -1.53 - 2.28 - - 0.51 3.07 -
AMTR_s00034p00201690 (evm_27.TU.AmTr_v1.0_scaffold00034.73)
-0.13 -7.87 -0.02 1.75 -0.33 0.79 -0.64 -0.41 -0.51 -0.2 -1.28 -0.82 -0.76 0.04 0.88 -0.69 -2.66 -0.64 -0.47 0.98 -0.7 1.03
AMTR_s00036p00023770 (evm_27.TU.AmTr_v1.0_scaffold00036.4)
- - - - - - - - - - - - 3.3 - - - - - - 3.6 - -
AMTR_s00038p00235960 (evm_27.TU.AmTr_v1.0_scaffold00038.237)
0.73 1.8 1.49 1.82 -3.33 -4.08 -7.05 - -5.46 -4.37 -1.32 -1.95 0.03 -0.29 -1.56 -3.51 -3.74 -1.78 -4.43 2.63 -4.52 -0.51
AMTR_s00038p00236470 (evm_27.TU.AmTr_v1.0_scaffold00038.240)
-3.32 0.8 -0.57 2.94 -6.7 - -0.78 -5.5 -1.56 -1.27 -4.28 -4.07 -1.47 -0.73 0.18 -6.22 -1.67 -3.53 -4.54 2.86 - -0.94
AMTR_s00041p00200870 (evm_27.TU.AmTr_v1.0_scaffold00041.181)
- - - - 2.58 - - - - - - - - - - - - - - 4.0 - -
AMTR_s00044p00031990 (evm_27.TU.AmTr_v1.0_scaffold00044.8)
2.6 -2.93 -8.56 0.91 -3.53 -5.68 -5.78 -4.97 -4.17 -3.6 -0.91 -0.93 -1.18 -1.01 -0.99 -1.37 1.59 -2.95 -1.78 2.78 -2.3 -1.9
AMTR_s00044p00212310 (evm_27.TU.AmTr_v1.0_scaffold00044.224)
1.17 - 2.16 1.78 0.34 -4.89 -5.97 -8.04 -0.35 -2.31 -2.59 -5.05 -0.85 1.79 0.99 -1.03 -0.82 -4.24 -4.22 -1.97 -5.4 0.93
AMTR_s00045p00089710 (evm_27.TU.AmTr_v1.0_scaffold00045.80)
2.04 - - 1.63 -3.49 - -7.1 - -9.57 - -0.37 -0.16 -0.96 -2.74 -3.17 -2.12 0.42 -1.58 -1.21 3.22 -1.2 -2.37
AMTR_s00045p00089930 (evm_27.TU.AmTr_v1.0_scaffold00045.81)
0.92 - 1.2 1.34 -1.48 - -8.71 - -9.2 -10.06 -0.0 0.31 0.17 -0.13 -0.43 -1.02 -1.33 0.16 0.45 2.1 1.04 -2.5
AMTR_s00046p00212970 (evm_27.TU.AmTr_v1.0_scaffold00046.138)
- - - 0.58 1.37 - -2.11 - -1.35 -3.27 1.26 - 0.17 -1.27 -2.38 - 0.51 0.48 -1.68 2.97 0.32 -0.19
AMTR_s00052p00104710 (evm_27.TU.AmTr_v1.0_scaffold00052.31)
- - - 2.24 - - - - - - 1.15 - 0.53 -0.96 -0.61 - 0.79 - - 1.88 2.58 0.06
AMTR_s00055p00162350 (evm_27.TU.AmTr_v1.0_scaffold00055.81)
- - - - - - - - - - - - - - - - - - - 4.46 - -
AMTR_s00056p00067690 (evm_27.TU.AmTr_v1.0_scaffold00056.43)
-0.45 -1.15 -0.72 2.58 -0.19 -2.65 -4.53 0.4 -4.34 -4.42 -3.29 -1.8 -2.54 -2.48 0.73 -3.99 -1.21 0.4 -1.21 2.72 -1.24 -3.74
1.53 -4.67 1.32 1.21 -1.61 -0.51 -1.45 -1.81 -1.56 -2.0 0.65 0.47 -1.34 -0.55 -0.99 -1.51 0.48 0.2 -0.29 0.52 0.35 0.02
AMTR_s00057p00180300 (evm_27.TU.AmTr_v1.0_scaffold00057.190)
- - - 3.14 -0.39 - - - - - - - - - - - 0.14 - 0.1 3.27 - -0.78
AMTR_s00058p00196450 (evm_27.TU.AmTr_v1.0_scaffold00058.196)
- - - - - - - - - - - - 2.18 - - - - - - 3.44 - 2.72
AMTR_s00059p00176030 (evm_27.TU.AmTr_v1.0_scaffold00059.179)
-0.26 1.76 - 0.63 0.05 - -3.64 - -1.98 -2.39 0.77 -0.26 0.78 -0.76 -0.77 -0.82 0.19 0.64 0.66 1.51 -0.28 -0.48
AMTR_s00061p00163990 (evm_27.TU.AmTr_v1.0_scaffold00061.162)
- - - 1.51 0.55 - -5.61 - -7.7 -5.12 0.44 0.67 0.35 -0.01 0.71 -1.08 -0.59 -0.71 0.18 1.75 2.03 -1.15
AMTR_s00062p00182620 (evm_27.TU.AmTr_v1.0_scaffold00062.176)
- - - - - - - - 2.17 2.94 - - - - - - - - - 3.3 - -
AMTR_s00069p00171910 (evm_27.TU.AmTr_v1.0_scaffold00069.147)
2.34 -5.76 0.18 1.13 -2.2 -4.22 -0.3 -1.33 -1.15 -0.7 -1.54 -1.74 -0.51 -1.44 0.56 -4.48 0.27 -0.61 -0.34 1.86 -1.22 0.18
AMTR_s00072p00050860 (evm_27.TU.AmTr_v1.0_scaffold00072.18)
- - - 1.69 1.01 - - - -5.05 -4.89 -1.43 0.31 0.4 -1.13 0.83 -0.25 0.25 1.12 -0.86 1.41 1.55 0.26
AMTR_s00073p00066340 (evm_27.TU.AmTr_v1.0_scaffold00073.20)
- - 2.95 1.18 0.47 - - - -5.16 - -1.02 -0.26 -4.85 -4.16 -5.58 - -0.36 -0.46 -1.62 2.85 - -3.24
AMTR_s00075p00173960 (evm_27.TU.AmTr_v1.0_scaffold00075.57)
- - - - - - - - - - - - 3.3 - - - - - - 3.61 - -
AMTR_s00076p00015310 (evm_27.TU.AmTr_v1.0_scaffold00076.1)
- - - 2.49 -0.5 - - - -4.08 - 1.27 - -0.43 0.74 -0.24 - - - 0.08 3.1 - -1.61
AMTR_s00079p00159110 (evm_27.TU.AmTr_v1.0_scaffold00079.71)
- - - - - - - - - - - - - - - - - - - 4.46 - -
AMTR_s00079p00188980 (evm_27.TU.AmTr_v1.0_scaffold00079.113)
- - - 2.58 -2.91 - -5.57 - -5.8 -7.92 -1.0 -1.47 -0.78 2.08 -0.12 -0.71 -2.24 -1.66 -2.15 2.36 0.92 -0.21
AMTR_s00099p00082310 (evm_27.TU.AmTr_v1.0_scaffold00099.61)
- - - - - - - - - - - - - - - - - - - 4.46 - -
AMTR_s00099p00142390 (evm_27.TU.AmTr_v1.0_scaffold00099.129)
1.22 0.61 1.2 0.27 -0.83 -4.69 -4.51 -8.4 -4.7 -5.03 -0.06 -0.78 0.95 -1.21 -0.51 -2.66 -0.07 0.43 0.26 1.89 -0.11 0.05
AMTR_s00103p00139970 (evm_27.TU.AmTr_v1.0_scaffold00103.93)
- - - - - - - - - - - - - - - - - - - 4.46 - -
AMTR_s00120p00059120 (evm_27.TU.AmTr_v1.0_scaffold00120.23)
- - - 1.31 -1.0 - -1.47 -3.48 -1.91 -1.7 0.69 -0.9 0.23 0.67 -0.65 - 0.57 - 0.03 1.15 2.63 0.59
AMTR_s00135p00080850 (evm_27.TU.AmTr_v1.0_scaffold00135.41)
-1.93 -1.24 -0.66 0.54 -1.29 -0.05 -0.72 -0.87 -0.0 -0.12 0.23 -0.19 0.06 0.22 -0.3 0.29 0.27 0.17 0.07 0.94 0.8 0.55
AMTR_s00160p00061390 (evm_27.TU.AmTr_v1.0_scaffold00160.15)
0.47 -1.3 -0.32 1.12 0.2 - -6.29 - -5.33 -5.1 -0.12 0.28 0.7 0.22 0.57 -1.55 -0.35 0.19 0.53 1.91 -0.12 0.3
AMTR_s00179p00032420 (evm_27.TU.AmTr_v1.0_scaffold00179.5)
-0.69 1.16 1.81 1.54 -0.76 -4.5 -7.91 -8.43 -8.39 -7.84 -1.81 -1.9 -0.24 -3.24 -0.58 -4.58 -1.71 -0.77 0.46 2.13 1.65 -3.75
AMTR_s00338p00015190 (evm_27.TU.AmTr_v1.0_scaffold00338.1)
0.46 - - -0.48 -0.99 -0.72 -0.3 -2.65 0.1 0.04 1.05 0.5 0.6 -0.56 -0.2 -1.36 0.28 0.21 -0.78 1.27 0.83 0.71
AMTR_s00486p00011160 (evm_27.TU.AmTr_v1.0_scaffold00486.2)
- - - - 1.66 - - - - - - - - 2.99 - - - - - 3.44 - -
AMTR_s01082p00010400 (evm_27.TU.AmTr_v1.0_scaffold01082.1)
- - - -0.74 0.36 - - - - - - - -0.63 - 2.6 - - - - 3.62 - 0.18
AMTR_s01692p00003290 (evm_27.TU.AmTr_v1.0_scaffold01692.1)
- - - - - - - - - - - - - - 2.9 - - - - 3.86 - -
AMTR_s01999p00005380 (evm_27.TU.AmTr_v1.0_scaffold01999.1)
- - - - - - - - - - - - - - - - - - - 4.46 - -
AMTR_s02385p00008450 (evm_27.TU.AmTr_v1.0_scaffold02385.1)
- - 0.46 -1.36 -0.99 -2.85 -5.37 - -5.9 -5.06 - - 2.3 -0.38 -0.73 - - - - 3.41 - 1.37
AMTR_s03205p00004670 (evm_27.TU.AmTr_v1.0_scaffold03205.1)
- - - - 1.93 - - - - -10.42 - - -5.99 - - - - - - 4.18 - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.