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Heatmap: Cluster_25 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Trophophore
Sporophore with Sporangia
Petiole
Rhizome
Root
0.52 0.25 0.21 -0.19 -1.53
0.84 0.48 -0.1 -0.53 -2.42
0.64 0.35 -0.02 0.11 -3.29
0.92 0.27 0.38 -0.91 -3.8
Ore_g01040 (PSBQ)
 1.19 0.37 -0.36 -0.71 -4.88
0.4 0.64 -0.15 0.27 -6.24
Ore_g01644 (GUN4)
 0.67 0.16 0.08 0.29 -6.69
0.96 0.14 -0.48 0.02 -2.14
Ore_g02388 (NADP-ME2)
 0.78 0.31 -0.13 -0.05 -2.61
0.82 0.28 -0.19 -0.01 -2.69
1.18 0.47 -1.19 -0.26 -3.7
0.86 0.06 -0.26 -0.2 -1.18
0.75 0.39 -0.05 -0.11 -3.13
Ore_g04397 (CSD2)
 0.8 0.21 0.0 -0.26 -1.89
Ore_g04398 (CSD2)
 0.65 0.25 -0.06 -0.05 -1.71
0.6 0.08 0.22 -0.22 -1.33
0.91 0.19 -0.11 0.08 -7.53
0.91 0.14 0.25 -0.62 -2.5
Ore_g04713 (CHLM)
 0.71 0.29 -0.19 -0.13 -1.55
Ore_g04857 (PSAH2)
 1.0 0.17 0.3 -0.64 -11.67
0.58 0.2 -0.04 -0.19 -1.01
1.01 0.06 -0.36 0.02 -2.82
0.8 0.29 0.35 -0.4 -8.11
1.15 0.09 -0.41 -0.61 -1.72
0.99 0.19 0.27 -0.59 -7.46
Ore_g05380 (LHCB4.1)
 0.82 0.25 0.03 0.01 -5.73
0.89 0.11 0.15 -0.19 -3.78
Ore_g05952 (D6PKL1)
 0.97 0.52 -0.16 -0.51 -6.26
Ore_g06064 (mtLPD1)
 0.67 0.29 0.09 -0.52 -1.21
Ore_g06144 (PSBR)
 0.96 0.17 0.34 -0.6 -11.72
Ore_g06384 (CYP38)
 0.74 0.18 -0.3 -0.14 -1.08
0.36 0.21 0.17 0.03 -1.28
Ore_g07120 (PORC)
 0.8 0.34 0.25 -0.36 -5.89
0.82 0.25 -0.54 0.35 -3.79
Ore_g07170 (GPAT6)
 0.73 0.46 -0.38 0.2 -4.49
1.24 0.24 -0.44 -0.78 -2.84
Ore_g07562 (PSAN)
 0.66 0.2 0.35 -0.01 -13.55
Ore_g07563 (PSAN)
 0.77 0.17 0.42 -0.26 -13.22
Ore_g07602 (GDC1)
 0.92 0.21 0.11 -0.55 -2.39
0.45 0.37 -0.15 -0.03 -1.14
Ore_g07782 (CAB4)
 0.84 0.21 0.1 -0.11 -4.32
Ore_g07871 (GUN4)
 1.01 0.15 0.16 -0.43 -5.53
Ore_g08176 (CA2)
 0.99 0.28 -0.64 -0.06 -2.29
0.72 0.2 0.42 -0.22 -10.92
Ore_g08673 (DXR)
 0.44 0.35 -0.04 0.24 -2.2
Ore_g08688 (CCH)
 0.98 0.46 -0.18 -0.43 -5.23
1.12 0.2 -0.04 -0.52 -
0.9 0.35 0.07 -0.94 -1.81
0.61 0.36 0.04 0.22 -
0.9 0.13 -0.2 -0.31 -1.44
Ore_g09411 (PSAE-2)
 0.86 0.24 0.01 -0.01 -9.18
0.78 0.18 -0.37 0.01 -1.4
0.88 0.53 0.07 -0.66 -5.33
Ore_g10198 (UGT85A2)
 0.84 0.24 0.06 -0.12 -3.94
0.92 0.52 -1.16 0.2 -3.79
Ore_g10662 (UGT85A1)
 1.1 0.19 -0.03 -1.03 -2.0
Ore_g10858 (CP24)
 0.6 0.45 -0.09 0.21 -5.54
1.12 0.24 -0.31 -0.7 -2.12
Ore_g11334 (CP31B)
 0.84 0.02 -0.21 -0.34 -0.91
0.57 0.35 0.08 0.21 -5.48
0.84 0.55 -0.52 -0.06 -3.58
0.78 0.38 -0.18 -0.48 -1.42
Ore_g13431 (UGT85A7)
 1.22 0.3 -0.07 -1.2 -4.42
Ore_g13792 (PSAK)
 0.67 0.35 0.23 -0.05 -11.39
0.77 0.38 0.23 -0.75 -2.14
0.66 0.23 0.29 -0.57 -1.49
Ore_g14801 (PSAE-2)
 1.08 0.31 0.06 -0.72 -10.17
0.68 0.41 0.14 -0.45 -2.08
Ore_g15241 (CLPP6)
 0.56 0.25 0.03 -0.31 -0.97
Ore_g15308 (LHCB5)
 0.76 0.24 0.14 0.03 -10.28
0.53 0.15 0.07 -0.27 -0.82
Ore_g15713 (LACS4)
 0.53 0.48 -0.06 -0.21 -1.57
1.12 0.17 0.09 -0.66 -8.17
0.61 0.58 -0.31 0.22 -
0.47 0.22 0.01 -0.14 -0.88
Ore_g16765 (HEME2)
 0.49 0.34 0.17 0.09 -2.85
0.99 0.38 0.06 -0.59 -7.32
Ore_g17545 (PSAD-1)
 0.69 0.25 0.26 -0.01 -9.12
0.83 0.04 0.49 -0.33 -
Ore_g17986 (UGT85A7)
 0.46 0.16 0.09 0.24 -1.94
0.57 0.22 -0.34 -0.08 -0.7
0.76 0.19 -0.38 -0.27 -0.8
0.4 0.1 -0.07 -0.13 -0.43
Ore_g18768 (AAE1)
 1.01 0.27 -0.35 -0.61 -1.61
0.46 0.19 -0.57 0.1 -0.44
0.78 0.4 0.08 -0.52 -2.22
0.9 0.19 0.01 -0.25 -2.83
Ore_g19666 (2CPB)
 0.86 0.23 -0.27 -0.34 -1.34
Ore_g20049 (APX4)
 0.8 0.3 -0.14 -0.02 -2.88
0.54 0.2 0.16 0.1 -2.28
Ore_g20498 (PSAL)
 0.68 0.33 0.14 0.05 -8.21
Ore_g20664 (NOL)
 0.79 0.63 -0.38 -0.51 -1.96
Ore_g21011 (PSBQ)
 0.82 0.29 0.29 -0.37 -6.62
Ore_g21027 (LHCB2)
 0.43 0.22 0.23 0.39 -10.51
0.54 0.39 -0.75 0.22 -1.08
0.71 0.21 0.29 -0.69 -1.45
0.56 0.24 0.04 -0.53 -0.69
0.76 0.4 -0.21 0.16 -8.84
Ore_g26025 (PETE2)
 0.72 0.33 0.11 0.03 -10.88
0.88 0.3 0.07 -0.53 -2.36
0.8 0.38 0.0 -0.34 -2.61
0.87 0.31 0.2 -0.38 -6.11
Ore_g27683 (PSBY)
 0.75 0.35 0.14 -0.13 -5.32
1.04 0.4 -0.27 -0.66 -2.64
Ore_g28549 (CSD1)
 0.31 0.44 -0.04 -0.09 -1.02
Ore_g28641 (CHL)
 0.67 0.22 0.05 -0.16 -1.66
Ore_g28824 (LIL3:1)
 0.77 0.2 -0.18 -0.48 -0.89
0.55 0.15 -0.11 0.14 -1.33
0.74 0.23 0.19 -0.34 -2.12
Ore_g30216 (LHCA3)
 0.69 0.16 0.39 -0.07 -8.29
Ore_g30336 (LPA19)
 0.71 0.29 -0.1 -0.25 -1.44
Ore_g30412 (LHCA1)
 0.77 0.19 0.18 0.01 -6.07
Ore_g31124 (OEC33)
 1.0 0.17 0.26 -0.56 -10.81
Ore_g31125 (OEC33)
 0.92 0.29 0.32 -0.65 -
0.82 0.38 0.04 -0.16 -11.16
1.07 -0.07 -0.27 0.03 -3.26
Ore_g33396 (LHCA3)
 0.78 0.29 0.25 -0.22 -6.32
0.45 0.02 -0.09 -0.07 -0.45
Ore_g34253 (PSBQ)
 0.78 0.38 0.12 -0.22 -5.02
Ore_g34262 (CH1)
 0.55 0.36 0.04 0.11 -2.71
Ore_g34762 (PMSR4)
 0.58 0.25 -0.24 -0.13 -0.84
0.58 0.74 -0.15 -0.65 -1.72
Ore_g35944 (LHCB5)
 0.64 0.4 0.01 0.16 -9.38
Ore_g35945 (PSAE-2)
 0.72 0.31 -0.01 0.15 -6.58
0.47 0.39 0.04 -0.23 -1.25
Ore_g36702 (PSAK)
 0.79 0.23 0.4 -0.38 -10.08
Ore_g36756 (LHCA1)
 0.66 0.22 0.13 0.13 -3.96
0.71 0.21 0.24 -0.35 -2.04
0.54 0.4 0.41 -0.15 -6.69
0.79 0.3 -0.04 -0.1 -2.93
Ore_g38506 (PETE1)
 0.45 0.31 0.16 -0.01 -1.8
0.71 0.13 -0.23 -0.47 -0.54
0.81 0.4 -0.32 -0.11 -2.37
Ore_g41009 (PDF2)
 0.9 0.66 -0.27 -0.49 -5.54
Ore_g41501 (TT7)
 0.82 0.15 0.32 -0.25 -5.38
0.83 0.47 0.13 -0.8 -2.62
0.65 0.17 0.52 -0.28 -4.27
Ore_g42003 (CXE16)
 0.44 0.28 -0.31 0.12 -0.92
Ore_g42614 (MEE59)
 0.71 0.63 0.07 -0.38 -
Ore_g43266 (LHCA2)
 0.83 0.32 -0.28 0.2 -10.52
Ore_g43267 (LHCA2)
 0.95 0.32 -0.23 -0.06 -9.96
0.62 0.02 -0.12 -0.27 -0.52
0.64 0.35 0.17 -0.02 -4.09
Ore_g44375 (NPY3)
 0.66 0.51 -1.13 0.44 -2.48
Ore_g45079 (LHCA1)
 0.62 0.21 0.02 0.32 -4.65

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.