Heatmap: Cluster_214 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00002p00202450 (evm_27.TU.AmTr_v1.0_scaffold00002.193)
- - - - 3.74 - - - 0.64 0.51 - - 0.51 -2.31 2.02 - - - - - - -
AMTR_s00002p00249330 (evm_27.TU.AmTr_v1.0_scaffold00002.346)
- - - -7.1 3.7 -1.45 -2.56 -4.96 -1.73 -2.67 -1.73 1.18 -2.26 -2.61 2.05 -2.63 -2.67 -4.42 -3.49 -2.85 -2.26 -2.92
AMTR_s00003p00093520 (evm_27.TU.AmTr_v1.0_scaffold00003.56)
- - - - 3.14 - -1.59 - -1.27 -0.9 -0.16 - -2.21 -0.8 1.31 - - - - -1.67 2.82 -1.44
AMTR_s00004p00140190 (evm_27.TU.AmTr_v1.0_scaffold00004.135)
- -3.5 - - 3.67 - - - - -4.9 -2.24 0.54 -3.0 -4.8 2.34 - - - 1.19 - - -
AMTR_s00004p00140550 (evm_27.TU.AmTr_v1.0_scaffold00004.136)
- - - - 4.04 - -0.01 - 0.06 - - - - - 1.84 - - - - - - -
AMTR_s00009p00221680 (evm_27.TU.AmTr_v1.0_scaffold00009.161)
- - - - 3.9 - -0.85 - -3.05 -0.87 -0.62 - - - 1.69 - - 0.97 - - - -
AMTR_s00009p00243470 (evm_27.TU.AmTr_v1.0_scaffold00009.226)
- -1.64 -1.25 -5.63 3.78 - -3.67 - -4.36 -4.15 -2.05 0.93 -0.16 -2.45 1.68 -4.32 -1.57 - -2.46 -2.78 - -2.23
AMTR_s00009p00259300 (evm_27.TU.AmTr_v1.0_scaffold00009.308)
- - - - 4.08 - -6.08 -2.79 -5.49 - - - -3.77 -4.85 1.82 - - - -2.5 -3.41 -0.09 -4.37
AMTR_s00009p00261030 (evm_27.TU.AmTr_v1.0_scaffold00009.328)
- - - - 4.06 - - - -0.13 - - - - - 2.12 - - - - - - -
AMTR_s00013p00179490 (evm_27.TU.AmTr_v1.0_scaffold00013.104)
- - - - 3.58 - 0.13 - 2.0 0.17 - - - - 1.65 - - - - - - -0.63
AMTR_s00014p00238410 (evm_27.TU.AmTr_v1.0_scaffold00014.106)
- - - -4.33 3.94 - -2.47 - -1.48 -1.31 - - -1.45 -0.95 2.06 - - - - -3.27 - -0.97
AMTR_s00019p00130890 (evm_27.TU.AmTr_v1.0_scaffold00019.111)
- - - - 4.18 - - - - 0.95 - - - - 0.94 - - - - - - -
AMTR_s00019p00231570 (evm_27.TU.AmTr_v1.0_scaffold00019.318)
- - - - 4.21 - - - - - - - - - 1.8 - - - - - - -
AMTR_s00024p00146450 (evm_27.TU.AmTr_v1.0_scaffold00024.95)
- - - - 3.64 - -0.15 - 0.1 0.69 - 0.7 -3.03 -2.82 2.01 - - - - -4.11 - -5.93
AMTR_s00024p00168400 (evm_27.TU.AmTr_v1.0_scaffold00024.124)
-0.41 -0.81 -1.16 0.18 3.69 -0.09 -7.5 -6.14 -9.96 -8.37 -3.2 -2.32 -1.17 1.03 0.92 -5.79 -5.1 -6.15 -3.87 -1.81 -5.31 -3.0
AMTR_s00025p00157980 (evm_27.TU.AmTr_v1.0_scaffold00025.178)
- - -2.68 - 3.99 -1.92 -4.26 - - - 0.54 - -1.23 - 0.85 - -0.71 - - -0.58 - -0.49
AMTR_s00030p00228540 (evm_27.TU.AmTr_v1.0_scaffold00030.178)
- - - - 4.22 - - - - - - - - - 1.73 - - - - - - -
AMTR_s00033p00121580 (evm_27.TU.AmTr_v1.0_scaffold00033.62)
- - - - 4.11 - - - - - - - - - 2.22 - - - - - - -
AMTR_s00034p00191110 (evm_27.TU.AmTr_v1.0_scaffold00034.67)
- - - 0.81 4.14 - - - - - - - - - 1.38 - - - - - - -
AMTR_s00037p00208050 (evm_27.TU.AmTr_v1.0_scaffold00037.108)
- - - - 3.94 - - - 0.22 -0.46 - - -2.02 -2.41 2.0 - - - - - - -1.45
AMTR_s00038p00239200 (evm_27.TU.AmTr_v1.0_scaffold00038.247)
- - - - 4.37 - - - - - - - - - 0.46 - - - - - - -
AMTR_s00039p00080320 (evm_27.TU.AmTr_v1.0_scaffold00039.43)
- - - - 4.16 - - - - - - - - 0.68 1.32 - - - - - - -
AMTR_s00042p00216310 (evm_27.TU.AmTr_v1.0_scaffold00042.66)
- - 0.46 - 3.76 - - - - - - - - -0.29 2.65 - - - - - - -
AMTR_s00049p00184230 (evm_27.TU.AmTr_v1.0_scaffold00049.182)
- - - - 3.22 - -3.46 - -3.24 -1.0 - 1.36 - -3.66 1.69 - - - - - 2.6 -
AMTR_s00052p00096240 (evm_27.TU.AmTr_v1.0_scaffold00052.27)
- - - - 4.23 - - - - - - - - - 1.67 - - - - - - -
AMTR_s00053p00223320 (evm_27.TU.AmTr_v1.0_scaffold00053.177)
- - - - 4.16 - - - - - - - 0.6 -0.07 0.77 - - - - - - -
AMTR_s00054p00043200 (evm_27.TU.AmTr_v1.0_scaffold00054.14)
- - - - 4.13 - -2.66 - -2.28 - - - - - 2.05 - - - - - - -
AMTR_s00060p00211550 (evm_27.TU.AmTr_v1.0_scaffold00060.156)
- - - - 3.22 - - - - - - - - 1.1 1.76 - - - - - 2.84 -
AMTR_s00062p00204980 (evm_27.TU.AmTr_v1.0_scaffold00062.218)
- - - - 4.18 - - - -1.36 -1.69 - - - - 1.27 - - - - -2.18 - -1.01
AMTR_s00070p00072810 (evm_27.TU.AmTr_v1.0_scaffold00070.31)
- - - - 4.2 - - - - - - - - - 1.84 - - - - - - -
AMTR_s00073p00147400 (evm_27.TU.AmTr_v1.0_scaffold00073.39)
- - - - 4.33 - -1.27 - - -0.95 - - - - 0.01 - - - - - - -
AMTR_s00074p00032520 (evm_27.TU.AmTr_v1.0_scaffold00074.4)
- - - - 3.88 - -1.29 - 0.99 0.63 - - - -1.44 1.59 - - - - - - -
AMTR_s00074p00185860 (evm_27.TU.AmTr_v1.0_scaffold00074.108)
- - - - 3.93 - - - - - - - - 0.77 1.83 - - - - - - 0.57
AMTR_s00078p00172470 (evm_27.TU.AmTr_v1.0_scaffold00078.164)
- - - - 4.13 - - - - - - - - 0.91 1.39 - - - - - - -
AMTR_s00080p00106130 (evm_27.TU.AmTr_v1.0_scaffold00080.40)
- - - - 4.06 - - - - - - - - 0.04 2.09 - - - - - - -
- - - - 4.29 - - - - - - - -1.46 -1.74 0.79 - - - - -3.49 - -
AMTR_s00099p00035930 (evm_27.TU.AmTr_v1.0_scaffold00099.20)
- - - - 4.07 - - - -1.45 - - - - - 1.03 - - - - - - 1.51
AMTR_s00104p00077710 (evm_27.TU.AmTr_v1.0_scaffold00104.28)
- - - - 3.83 - 0.25 - -2.29 -0.59 - - -1.48 -0.28 0.97 - -0.07 - - 0.61 - -3.17
AMTR_s00118p00076300 (evm_27.TU.AmTr_v1.0_scaffold00118.16)
- - - - 3.7 - -2.96 - -1.54 -2.81 - - -2.28 -2.42 1.52 1.98 - - - -0.81 - -0.61
AMTR_s00124p00094060 (evm_27.TU.AmTr_v1.0_scaffold00124.16)
- - - -3.92 3.76 - - - -3.92 - 0.91 -0.08 0.93 -1.07 1.5 - -2.22 - - - - -3.92
AMTR_s00129p00115880 (evm_27.TU.AmTr_v1.0_scaffold00129.89)
- - - - 3.93 - -1.95 -3.28 -0.37 -0.27 - 0.31 - -4.46 1.79 - - - - - - -
AMTR_s00145p00093630 (evm_27.TU.AmTr_v1.0_scaffold00145.37)
- - - - 4.21 - - - - -0.69 - - - - 1.51 - - - - - - -
AMTR_s00154p00094610 (evm_27.TU.AmTr_v1.0_scaffold00154.63)
- - - -0.84 3.36 - -2.08 - -2.28 -1.62 - 1.54 -0.44 -1.21 0.82 - - - - -0.31 1.19 0.6
AMTR_s00154p00097120 (evm_27.TU.AmTr_v1.0_scaffold00154.66)
- - - - 4.06 - - - -1.92 -0.27 - - - - 1.83 - - - - - - -0.57
AMTR_s00169p00042500 (evm_27.TU.AmTr_v1.0_scaffold00169.24)
- - - - 3.65 - -1.23 - -1.09 -1.21 - 1.86 -3.21 -3.96 2.09 - - - - - - -
- - - - 4.34 - - - - - - - - - 0.81 - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.