Heatmap: Cluster_160 (HCCA)

View as: (view raw or zlog-transformed)

View using InCHLib : here ( Experimental feature, still under development)

(Values are normalized against highest expression of the row)

Gene	Egg apparatus cell (small)	Egg apparatus cell (medium)	Egg apparatus cell (large)	Ovary	Uninuclear microspore	Generative cell	Pollen	Sperm	Pollen tube (bicellular)	Pollen tube (tricellular)	Flower (bud, female)	Flower (bud, male)	Flower (female)	Flower (male)	Flower (tepals)	Fruit (female)	Apical meristem	Shoot (female)	Shoot (male)	Leaf (male)	Leaves	Root (male)
AMTR_s00002p00255070 (evm_27.TU.AmTr_v1.0_scaffold00002.389)	0.0	0.0	0.0	0.0	1.0	0.0	0.96	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
AMTR_s00002p00259430 (evm_27.TU.AmTr_v1.0_scaffold00002.434)	0.0	0.0	0.0	0.0	0.03	0.0	0.03	0.0	0.48	0.42	0.0	0.0	0.0	0.03	1.0	0.0	0.0	0.0	0.29	0.05	0.0	0.0
AMTR_s00003p00036090 (evm_27.TU.AmTr_v1.0_scaffold00003.18)	0.42	0.0	0.33	0.26	0.15	0.0	1.0	0.0	0.7	0.79	0.25	0.29	0.23	0.26	0.15	0.16	0.09	0.1	0.17	0.07	0.14	0.11
AMTR_s00007p00143890 (evm_27.TU.AmTr_v1.0_scaffold00007.97)	0.0	0.0	0.0	0.19	0.57	0.0	0.78	1.0	0.16	0.17	0.01	0.53	0.02	0.04	0.06	0.0	0.01	0.0	0.0	0.0	0.0	0.0
AMTR_s00011p00223810 (evm_27.TU.AmTr_v1.0_scaffold00011.99)	0.0	0.0	0.0	0.0	1.0	0.0	0.97	0.0	0.34	0.44	0.15	0.0	0.02	0.14	0.3	0.0	0.0	0.0	0.0	0.57	0.0	0.0
AMTR_s00013p00155440 (evm_27.TU.AmTr_v1.0_scaffold00013.79)	0.0	0.0	0.0	0.01	0.88	0.74	0.93	0.08	1.0	0.81	0.21	0.82	0.09	0.17	0.54	0.19	0.18	0.0	0.05	0.04	0.05	0.13
AMTR_s00013p00255700 (evm_27.TU.AmTr_v1.0_scaffold00013.246)	0.49	0.32	0.29	0.05	0.74	0.95	1.0	0.39	0.55	0.67	0.28	0.18	0.35	0.38	0.34	0.25	0.54	0.13	0.13	0.17	0.12	0.17
AMTR_s00014p00234820 (evm_27.TU.AmTr_v1.0_scaffold00014.97)	0.0	0.0	0.0	0.0	0.91	0.0	0.25	0.0	0.14	0.15	0.1	1.0	0.39	0.35	0.71	0.45	0.32	0.0	0.15	0.33	0.26	0.73
AMTR_s00015p00258100 (evm_27.TU.AmTr_v1.0_scaffold00015.116)	0.0	0.0	0.0	0.0	0.85	0.0	1.0	0.01	0.62	0.52	0.0	0.48	0.0	0.13	0.82	0.13	0.0	0.0	0.0	0.0	0.0	0.01
AMTR_s00016p00253110 (evm_27.TU.AmTr_v1.0_scaffold00016.311)	0.0	0.0	0.0	0.0	0.55	0.0	0.61	0.12	0.81	0.76	0.01	0.24	0.08	0.45	1.0	0.25	0.01	0.1	0.08	0.01	0.0	0.66
AMTR_s00017p00164980 (evm_27.TU.AmTr_v1.0_scaffold00017.81)	0.31	0.19	1.0	0.02	0.26	0.06	0.46	0.19	0.77	0.78	0.15	0.28	0.12	0.29	0.92	0.06	0.13	0.06	0.07	0.08	0.03	0.31
AMTR_s00019p00257070 (evm_27.TU.AmTr_v1.0_scaffold00019.459)	0.0	0.0	0.0	0.0	0.65	0.0	0.06	0.0	0.07	0.04	0.0	0.0	0.0	0.02	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
AMTR_s00021p00041390 (evm_27.TU.AmTr_v1.0_scaffold00021.15)	0.26	0.01	0.25	0.21	0.13	0.02	0.64	0.37	0.61	0.71	0.36	0.32	0.51	0.34	1.0	0.73	0.17	0.39	0.48	0.3	0.31	0.17
AMTR_s00021p00219980 (evm_27.TU.AmTr_v1.0_scaffold00021.205)	0.0	0.0	0.0	0.0	0.32	0.0	0.59	0.0	1.0	0.47	0.0	0.0	0.15	0.0	0.42	0.0	0.0	0.0	0.0	0.0	0.0	0.0
AMTR_s00024p00203850 (evm_27.TU.AmTr_v1.0_scaffold00024.184)	0.07	0.07	0.05	0.01	0.04	0.1	0.66	0.01	0.42	0.35	0.16	0.2	0.33	0.41	1.0	0.44	0.06	0.07	0.09	0.12	0.04	0.11
AMTR_s00025p00098370 (evm_27.TU.AmTr_v1.0_scaffold00025.80)	0.0	0.0	0.0	0.0	0.82	0.0	0.16	0.0	0.3	0.18	0.07	0.72	0.31	0.22	1.0	0.16	0.49	0.0	0.21	0.0	0.76	0.3
AMTR_s00032p00208090 (evm_27.TU.AmTr_v1.0_scaffold00032.199)	0.0	0.0	0.0	0.0	0.46	0.0	0.63	0.0	0.47	0.5	0.0	0.54	0.0	0.07	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
AMTR_s00039p00184170 (evm_27.TU.AmTr_v1.0_scaffold00039.147)	0.02	0.0	0.0	0.0	0.4	0.32	1.0	0.81	0.09	0.18	0.0	0.27	0.05	0.78	0.83	0.0	0.0	0.0	0.0	0.0	0.0	0.0
AMTR_s00039p00184730 (evm_27.TU.AmTr_v1.0_scaffold00039.148)	0.0	0.0	0.0	0.0	0.4	0.0	1.0	0.36	0.15	0.26	0.0	0.26	0.01	0.23	0.85	0.0	0.0	0.01	0.01	0.0	0.0	0.0
AMTR_s00040p00169800 (evm_27.TU.AmTr_v1.0_scaffold00040.145)	0.0	0.0	0.0	0.0	0.66	0.0	0.29	0.0	0.21	0.31	0.0	0.53	0.01	0.12	1.0	0.34	0.01	0.01	0.0	0.0	0.0	0.0
AMTR_s00040p00170110 (evm_27.TU.AmTr_v1.0_scaffold00040.146)	0.0	0.0	0.0	0.0	0.62	0.26	0.34	0.05	0.61	0.43	0.0	0.26	0.01	0.14	1.0	0.12	0.0	0.0	0.0	0.0	0.0	0.0
AMTR_s00046p00064910 (evm_27.TU.AmTr_v1.0_scaffold00046.23)	0.83	0.01	0.35	0.27	0.98	0.91	1.0	0.25	0.67	0.88	0.3	0.44	0.47	0.57	0.49	0.61	0.24	0.3	0.33	0.26	0.25	0.31
AMTR_s00047p00177970 (evm_27.TU.AmTr_v1.0_scaffold00047.101)	0.55	0.15	0.17	0.33	0.33	0.21	1.0	0.22	0.55	0.67	0.26	0.2	0.25	0.36	0.29	0.34	0.18	0.18	0.21	0.21	0.14	0.26
AMTR_s00048p00194630 (evm_27.TU.AmTr_v1.0_scaffold00048.158)	0.65	0.27	0.27	0.02	0.5	0.49	0.4	0.44	1.0	0.87	0.19	0.29	0.11	0.17	0.91	0.03	0.27	0.11	0.08	0.13	0.08	0.06
AMTR_s00048p00232090 (evm_27.TU.AmTr_v1.0_scaffold00048.230)	0.0	0.0	0.0	0.0	0.75	0.0	0.71	0.0	0.85	0.79	0.0	1.0	0.03	0.02	0.54	0.0	0.06	0.0	0.1	0.18	0.0	0.02
AMTR_s00049p00034730 (evm_27.TU.AmTr_v1.0_scaffold00049.17)	0.0	0.0	0.0	0.01	0.71	0.0	0.99	0.0	0.95	0.8	0.01	0.88	0.0	0.12	1.0	0.1	0.0	0.0	0.0	0.0	0.0	0.0
AMTR_s00050p00076390 (evm_27.TU.AmTr_v1.0_scaffold00050.14)	0.29	0.24	0.07	0.06	0.63	0.0	0.71	0.0	0.54	0.87	0.33	0.45	0.16	0.23	1.0	0.09	0.3	0.62	0.45	0.27	0.07	0.64
AMTR_s00050p00076540 (evm_27.TU.AmTr_v1.0_scaffold00050.15)	0.24	0.69	0.26	0.08	0.75	0.49	0.46	0.02	0.44	0.6	0.63	0.59	0.23	0.27	1.0	0.13	0.9	0.83	0.63	0.32	0.25	0.54
AMTR_s00054p00182460 (evm_27.TU.AmTr_v1.0_scaffold00054.67)	0.76	0.24	0.23	0.0	0.11	0.4	0.37	0.45	0.78	1.0	0.11	0.11	0.12	0.26	0.58	0.01	0.2	0.05	0.02	0.04	0.01	0.11
AMTR_s00058p00187110 (evm_27.TU.AmTr_v1.0_scaffold00058.184)	0.53	0.32	0.3	0.04	0.91	0.23	1.0	0.1	0.8	0.84	0.42	0.37	0.48	0.4	0.81	0.21	0.22	0.17	0.21	0.4	0.25	0.27
AMTR_s00059p00177460 (evm_27.TU.AmTr_v1.0_scaffold00059.187)	0.0	0.0	0.0	0.0	0.55	0.0	1.0	0.0	0.26	0.4	0.07	0.24	0.04	0.16	0.29	0.05	0.03	0.21	0.12	0.09	0.0	0.02
AMTR_s00059p00203570 (evm_27.TU.AmTr_v1.0_scaffold00059.229)	0.0	0.0	0.0	0.0	0.97	0.0	0.97	0.0	0.0	0.17	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
AMTR_s00068p00197570 (evm_27.TU.AmTr_v1.0_scaffold00068.163)	0.0	0.0	0.0	0.1	1.0	0.0	0.89	0.0	0.35	0.32	0.0	0.0	0.05	0.11	0.17	0.0	0.0	0.0	0.07	0.02	0.0	0.89
AMTR_s00071p00120210 (evm_27.TU.AmTr_v1.0_scaffold00071.95)	0.17	0.24	0.02	0.03	1.0	0.96	0.7	0.58	0.66	0.64	0.21	0.22	0.13	0.31	0.27	0.09	0.6	0.14	0.07	0.06	0.12	0.18
AMTR_s00078p00091340 (evm_27.TU.AmTr_v1.0_scaffold00078.62)	0.23	0.06	0.0	0.0	0.28	1.0	0.89	0.06	0.47	0.44	0.24	0.33	0.28	0.2	0.24	0.02	0.42	0.02	0.01	0.16	0.01	0.29
AMTR_s00078p00116560 (evm_27.TU.AmTr_v1.0_scaffold00078.89)	0.0	0.66	0.0	0.0	0.23	0.02	1.0	0.3	0.92	0.95	0.39	0.55	0.12	0.34	0.72	0.11	0.27	0.26	0.15	0.12	0.29	0.1
AMTR_s00086p00117950 (evm_27.TU.AmTr_v1.0_scaffold00086.62)	0.0	0.0	0.0	0.0	0.76	0.0	1.0	0.0	0.64	0.29	0.0	0.0	0.0	0.07	0.85	0.0	0.0	0.0	0.0	0.0	0.0	0.0
AMTR_s00086p00118670 (evm_27.TU.AmTr_v1.0_scaffold00086.63)	0.0	0.0	0.0	0.54	1.0	0.0	0.51	0.33	0.22	0.34	0.02	0.23	0.07	0.1	0.85	0.09	0.0	0.0	0.0	0.0	0.0	0.0
AMTR_s00090p00165440 (evm_27.TU.AmTr_v1.0_scaffold00090.97)	0.02	0.02	0.0	0.06	0.72	0.0	0.08	0.01	0.1	0.12	0.32	1.0	0.28	0.37	0.82	0.06	0.37	0.29	0.21	0.29	0.12	0.06
AMTR_s00092p00163760 (evm_27.TU.AmTr_v1.0_scaffold00092.142)	0.91	0.36	0.35	0.1	0.27	0.27	0.68	0.59	0.72	1.0	0.13	0.19	0.33	0.32	0.35	0.37	0.15	0.14	0.18	0.18	0.12	0.34
AMTR_s00099p00106790 (evm_27.TU.AmTr_v1.0_scaffold00099.87)	0.21	0.0	0.1	0.05	0.99	1.0	0.47	0.31	0.74	0.67	0.16	0.17	0.17	0.39	0.62	0.25	0.08	0.07	0.04	0.16	0.07	0.16
AMTR_s00106p00117270 (evm_27.TU.AmTr_v1.0_scaffold00106.87)	0.11	0.0	0.07	0.16	0.66	0.21	1.0	0.0	0.53	0.56	0.0	0.0	0.04	0.14	0.38	0.0	0.0	0.0	0.02	0.04	0.04	0.03
AMTR_s00108p00141550 (evm_27.TU.AmTr_v1.0_scaffold00108.42)	0.0	0.0	0.0	0.0	0.79	1.0	0.91	0.45	0.44	0.61	0.45	0.0	0.36	0.21	0.23	0.05	0.29	0.18	0.17	0.18	0.0	0.16
AMTR_s00111p00145590 (evm_27.TU.AmTr_v1.0_scaffold00111.127)	0.6	0.68	0.33	0.14	1.0	0.84	0.87	0.41	0.79	0.77	0.32	0.34	0.34	0.54	0.57	0.17	0.36	0.2	0.19	0.24	0.08	0.32
AMTR_s00111p00148440 (evm_27.TU.AmTr_v1.0_scaffold00111.132)	0.0	0.0	0.0	0.0	0.69	0.0	0.19	0.0	0.34	0.48	0.53	1.0	0.16	0.06	0.57	0.16	0.24	0.18	0.23	0.08	0.16	0.57
AMTR_s00131p00088800 (evm_27.TU.AmTr_v1.0_scaffold00131.61)	0.0	0.0	0.0	0.0	0.96	0.0	1.0	0.0	0.16	0.18	0.0	0.0	0.0	0.06	0.41	0.0	0.0	0.0	0.0	0.0	0.0	0.0
AMTR_s00152p00028770 (evm_27.TU.AmTr_v1.0_scaffold00152.5)	0.13	0.1	0.02	0.08	0.71	0.49	1.0	0.15	0.57	0.54	0.3	0.24	0.28	0.38	0.6	0.43	0.23	0.19	0.22	0.23	0.14	0.2
AMTR_s00152p00050410 (evm_27.TU.AmTr_v1.0_scaffold00152.13)	0.0	0.0	0.0	0.0	0.57	0.0	1.0	0.0	0.7	0.8	0.18	0.0	0.08	0.09	0.12	0.0	0.48	0.0	0.0	0.0	0.0	0.51
AMTR_s00158p00077100 (evm_27.TU.AmTr_v1.0_scaffold00158.17)	0.0	0.0	0.0	0.0	1.0	0.0	0.98	0.0	0.17	0.19	0.0	0.15	0.01	0.14	0.11	0.94	0.05	0.0	0.0	0.0	0.0	0.06
AMTR_s00169p00025570 (evm_27.TU.AmTr_v1.0_scaffold00169.12)	0.0	0.0	0.0	0.0	0.87	0.0	0.29	0.01	0.36	0.31	0.76	1.0	0.09	0.07	0.58	0.06	0.78	0.0	0.05	0.0	0.0	0.27
AMTR_s00260p00018650 (evm_27.TU.AmTr_v1.0_scaffold00260.3)	0.0	0.0	0.0	0.0	0.62	0.0	0.58	0.0	0.49	0.6	0.04	0.14	0.17	0.19	1.0	0.02	0.02	0.04	0.07	0.24	0.05	0.05
AMTR_s00417p00007300 (evm_27.TU.AmTr_v1.0_scaffold00417.2)	0.0	0.0	0.0	0.04	1.0	0.0	0.63	0.03	0.47	0.67	0.0	0.24	0.0	0.13	0.4	0.0	0.0	0.0	0.0	0.0	0.0	0.0
AMTR_s02234p00007680 (evm_27.TU.AmTr_v1.0_scaffold02234.1)	0.08	0.0	0.0	0.0	1.0	0.21	0.46	0.41	0.24	0.27	0.02	0.07	0.01	0.06	0.32	0.02	0.02	0.0	0.0	0.0	0.0	0.02

Details

Expression values normalized per gene (using the maximum value, Green cells indicate low expression and red high. (Dark gray cells indicate missing values)