Heatmap: Cluster_85 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
-0.42 1.19 -0.57 -2.04 -1.07 0.44 2.71 -1.38 -0.57 -0.51 0.15 -3.91 -1.54 -2.25 0.26 -1.22 -2.4 -0.53 -0.05 -0.5
-0.42 1.19 -0.57 -2.04 -1.07 0.44 2.71 -1.38 -0.57 -0.51 0.15 -3.91 -1.54 -2.25 0.26 -1.22 -2.4 -0.53 -0.05 -0.5
-0.38 0.59 -0.07 -0.27 0.32 -0.27 1.59 0.23 -0.29 -0.31 0.58 -0.67 -0.19 -0.2 0.74 -0.95 -1.89 -1.04 -0.03 -2.04
-1.94 -3.31 -2.57 -3.77 - 2.19 3.89 -8.97 - -9.29 - - - - - - - -6.0 -5.62 -6.76
- -5.84 - -6.3 - -6.73 4.32 -10.04 - - - - - - - - - - - -6.14
-0.91 0.36 -0.47 -0.86 -0.15 -0.05 1.99 0.24 -0.29 -0.46 -0.29 -0.13 0.17 -0.15 -0.25 -1.04 -0.86 -0.19 -0.94 0.39
-0.35 0.64 -1.42 -0.34 -0.12 0.85 2.65 -0.81 -0.32 -0.74 -0.92 -1.53 -0.44 -0.84 -0.64 -0.41 -1.5 -1.71 -0.66 -0.56
- -0.88 - - -1.92 1.15 3.6 -1.67 -3.77 -3.78 - -2.15 - -2.48 -3.23 -2.75 -1.55 0.05 0.67 -0.43
-2.09 - - - -1.15 -0.11 3.2 -1.83 -3.08 -1.77 -3.53 -3.88 -1.0 -0.34 -2.14 -1.63 -3.01 -2.62 1.18 1.99
- - - - - - 4.32 - - - - - - - - - - - - -
0.12 -0.1 0.31 -0.92 -0.62 0.55 2.88 -0.98 -1.37 -1.02 -0.18 -1.1 -0.4 -0.54 -0.6 -2.49 -3.39 -2.13 -8.05 0.46
-2.91 -1.65 -1.29 -3.3 -2.17 -3.08 4.2 -5.56 -5.65 -4.65 -4.16 -7.58 -4.06 -3.62 -4.61 - - -7.28 - -
-2.19 -2.68 -1.68 -1.98 -1.52 -2.36 4.14 -4.5 -4.96 -3.26 -2.9 -6.58 -2.38 -2.54 -2.97 -8.98 - -6.65 -10.82 -7.15
-0.87 -3.07 -2.34 0.32 1.36 -2.96 2.03 0.57 0.36 0.27 -0.12 -1.42 -1.64 -2.7 0.19 0.3 -0.95 1.06 -1.41 -
-1.04 -0.35 -0.44 -0.89 -0.82 0.23 2.88 -0.99 -0.46 -0.63 -0.98 -1.39 -0.57 -0.59 -1.13 -0.74 -1.16 -0.5 0.49 -0.71
-0.41 0.04 -0.79 -0.44 -0.92 0.41 1.72 -0.17 -0.71 -0.62 0.92 0.26 0.11 -0.06 0.95 0.56 0.03 -4.22 -12.62 -6.4
-0.6 1.46 - 2.0 0.3 -0.51 2.9 -2.1 - -1.52 - -1.66 -2.04 - - - - -0.87 0.6 -
-0.37 -1.04 -0.43 -0.49 -1.16 2.02 2.3 -1.34 -2.81 -2.18 -1.59 -2.39 -1.66 -1.95 -2.38 -3.21 -1.53 -1.46 0.69 1.75
-2.07 -1.2 -3.51 -0.9 0.58 1.83 2.24 -0.73 -1.4 -1.2 -1.62 -1.18 -1.9 -1.9 -1.34 -2.11 -2.22 0.34 1.69 -0.16
- - - - - - 4.21 - - - - - - -0.84 - - - - -0.12 -
-9.4 - - -5.73 - -0.52 4.2 -5.88 - -9.29 - - - - - -7.15 - -0.65 -2.32 -5.11
-0.33 0.75 1.64 -1.17 -0.18 -1.21 3.13 -1.3 -5.41 -4.68 -2.89 -0.74 -3.23 - - -0.98 -2.17 -0.64 -5.49 0.25
-0.26 0.63 -0.32 -0.36 -0.22 -2.05 2.09 -0.11 0.44 0.41 0.24 -1.34 0.51 -0.16 0.55 -1.01 -1.63 -0.97 -4.93 -1.6
0.78 - - - - - 3.36 -0.58 - - -0.69 -2.54 - - 0.42 - - - 0.91 1.74
- - - - -3.26 2.62 3.66 -7.77 - - - -6.39 - - - -3.13 - - -0.68 -1.45
-1.76 - -1.76 - -1.6 -0.56 3.82 -1.97 -0.18 -1.57 -0.22 -1.72 -2.01 -3.26 -1.84 - - - -0.31 -2.06
-0.91 0.6 -0.83 -2.09 -0.73 0.12 2.5 -0.41 -0.65 -0.65 -0.47 -0.89 -0.02 -0.27 -0.26 -0.89 -1.67 -0.85 1.0 -1.06
-1.65 0.25 -1.33 -0.11 -0.64 -1.35 1.51 -0.12 0.25 0.42 1.19 -0.02 0.42 -0.06 1.32 -0.1 -0.71 -2.69 -12.33 -3.69
-0.87 -2.51 -0.35 -0.97 -0.39 -1.08 2.83 -0.64 -1.35 -1.28 0.04 -0.43 -1.27 -1.04 0.0 -1.74 -1.28 -1.32 0.13 1.21
-2.59 -2.51 -3.08 -3.67 -2.64 2.16 3.53 -2.17 -2.28 -2.2 -2.34 -2.21 -2.25 -2.58 -2.79 -3.72 -3.65 -1.36 -0.42 -1.22
-1.08 -1.85 -0.91 -1.43 -1.54 -3.0 2.19 0.73 -0.87 -0.68 0.73 1.24 1.25 0.11 0.55 -3.29 -1.58 -1.53 -1.17 -1.66
-4.56 -3.41 -3.7 -5.5 -6.26 -5.71 4.12 -2.84 -2.53 -1.82 -1.6 -3.63 -1.2 -1.99 -2.01 -2.99 -3.95 -6.23 - -2.55
-1.28 -2.08 0.09 -4.88 -5.31 -5.47 3.72 -9.29 - - - -9.51 - - - - -8.21 -3.86 -4.14 2.3
-0.54 -0.09 -0.15 -0.29 -0.0 -1.83 2.3 -0.73 -0.78 -0.88 -0.58 -1.33 -0.83 -0.66 -0.78 -0.41 -0.44 -0.59 -0.01 1.44
-0.13 1.42 0.2 0.86 -0.26 -0.7 2.79 -0.72 -2.91 -2.09 -1.85 -1.54 -1.78 -0.61 -1.49 - -0.92 - -1.0 0.23
-0.99 -2.0 -4.69 -3.78 -2.94 -0.32 2.04 -0.41 0.55 0.3 -0.33 -0.16 0.49 0.72 -0.47 1.11 0.21 -0.71 -2.89 0.16
-2.17 -2.46 -2.39 -1.73 -1.44 0.42 2.9 0.21 -1.07 -0.61 -0.81 -0.75 -1.01 -1.17 -1.18 -1.99 -0.73 -1.3 -0.13 1.56
- - - - - - 4.3 -6.7 - - - - - - - - - - -4.71 -2.1
- - - - - -1.28 4.28 -9.4 - - - - - - - - - -4.34 -3.43 -
-0.04 0.24 -0.16 -0.98 -0.76 1.01 2.69 -2.29 -0.78 -1.11 -3.63 -1.97 -1.98 0.43 -3.93 -2.11 -3.11 0.95 -0.41 0.12
-0.2 0.4 -0.39 -0.52 -0.46 0.78 1.7 -0.5 -0.18 -0.48 -0.02 -1.02 0.21 0.08 0.01 0.2 -0.88 -0.48 -0.76 -0.63
0.17 -1.07 -1.91 -0.85 -0.59 0.4 1.75 -0.1 0.06 0.31 -0.13 -0.33 -0.82 -0.85 -0.1 0.52 0.85 0.18 -1.09 -1.23
-0.91 - -0.17 -0.69 -3.3 - 2.53 0.17 0.43 0.48 0.81 -2.76 -1.13 -1.03 1.04 -1.52 0.65 - -0.41 -0.67
-5.73 -3.6 - - -0.98 0.85 3.2 -4.81 -3.37 -3.05 - -2.36 -1.42 -2.42 -1.53 -4.37 -0.84 -0.23 -2.8 2.45
-1.07 -0.17 -1.01 -0.39 -2.7 -3.52 3.86 -1.32 -2.71 -3.21 -2.86 -3.1 -2.69 -2.29 -3.02 -1.42 -2.13 -0.99 -5.13 -3.56
-2.72 - - - - -2.63 4.23 -5.28 - - - -4.78 -12.78 -11.4 -2.06 - - - -0.65 -
-0.63 -0.03 -0.87 -0.7 -0.06 -0.07 2.16 -0.57 -0.73 -0.87 -0.15 -0.8 -0.26 -0.57 -0.02 -0.57 -0.78 0.09 0.77 0.03
-1.35 0.21 - -0.17 -0.77 -0.65 3.47 -1.99 -1.52 - - -1.72 -2.22 -2.4 -2.0 0.1 -0.84 -2.0 -1.47 0.52
-3.5 -3.21 -2.87 -7.3 -3.39 -6.95 3.91 -9.7 - -8.68 - -9.17 -9.76 - - - - -6.29 -6.56 2.18
- - - - - - 4.24 - -1.25 -0.47 - - - - - - - - - -
- - - - - - 4.32 - - - - - - - - - - - - -
-2.12 -4.3 -3.12 -1.65 -2.22 0.57 4.01 -2.7 -5.05 -4.64 -2.65 -3.74 -3.31 -3.48 -2.32 -2.68 -3.62 -2.82 -2.49 -3.32
-0.05 -0.77 -0.02 0.61 -0.17 -2.34 1.69 -0.14 -0.41 -0.45 0.22 -0.19 -0.23 0.11 0.04 1.16 0.5 -0.88 -6.41 -5.94
-4.25 -3.6 -3.13 -4.28 -3.73 -0.59 4.17 -3.65 -3.68 -3.67 -7.04 -6.7 -8.91 -4.86 -8.8 -5.17 -2.3 -2.13 -2.29 -8.66
- - - - - - - - - - - - - - - - - - - -
-3.61 -4.11 -4.78 -1.31 -0.92 0.52 3.64 -3.68 -5.18 -4.85 -3.13 -3.77 -4.66 -4.22 -2.22 -4.42 -5.15 -1.33 1.47 0.12
0.83 -0.72 -0.28 1.0 -0.5 -0.71 3.61 -2.64 -6.48 -4.03 -5.83 -5.63 -6.09 -5.86 -5.51 -3.67 -2.77 -1.72 -6.04 -1.32
-2.13 0.96 -1.3 0.07 0.91 2.6 0.36 -2.53 -4.94 -4.55 -7.95 0.49 -7.2 -5.32 - -2.99 -1.19 1.01 1.14 -0.53
- - - -1.66 -0.46 1.16 3.98 -3.66 -3.92 -4.1 - - -2.7 -4.76 -3.45 -2.67 - - -1.74 -
-5.52 - - -2.95 -4.45 - 4.21 -4.24 - - -3.08 -0.95 -3.03 -3.89 -2.77 - - -2.33 - -5.91
-0.62 -0.91 -0.72 -0.33 0.06 1.05 1.45 0.11 -0.88 -1.06 -0.12 -0.43 0.06 -0.0 -0.18 -0.92 -0.76 0.17 0.05 0.67
-1.05 -10.48 -2.25 -0.07 0.12 -1.89 3.5 0.33 -2.22 -1.16 -0.84 -1.27 -1.79 -1.37 -1.54 - -22.0 0.44 -3.45 -1.82
-2.89 -2.63 -4.75 -2.68 -1.2 -1.33 3.9 -3.21 -3.53 -4.59 -1.92 -5.67 -3.74 -7.85 -1.69 -2.6 -5.89 -2.56 -2.54 1.22
-0.89 -0.8 -1.33 -0.86 0.23 0.68 1.14 0.08 0.12 -0.09 0.88 -0.55 0.6 0.41 0.81 -0.97 -0.48 -1.09 -0.94 -0.87
- - - - - 3.19 3.44 - - - - - - - - - - - - -
- - - - - 1.21 4.08 -3.4 - - - - - - - - - - -0.59 -
-2.38 -3.29 -2.96 -2.68 -1.95 0.62 2.92 0.11 -1.17 -0.51 -1.19 -0.57 -1.39 -1.26 -1.79 -1.55 -0.55 -1.23 0.01 1.67
- 2.13 -0.04 - - - 3.81 -2.5 - - - - - - - - - - -1.03 -
-0.41 - -0.9 -0.21 -0.99 1.29 3.53 -3.46 - - -2.06 -1.1 -2.43 - - -1.75 -1.93 -1.15 -1.51 0.05
-2.74 -2.94 - -2.98 -4.01 0.37 4.09 -5.52 -5.79 -4.94 -4.71 - -5.1 -5.69 - - - -3.86 -0.05 -4.77
-2.46 -1.29 -4.43 -1.11 -2.54 -1.2 2.77 -0.22 -0.66 -0.12 1.36 0.35 -0.92 -0.81 1.07 0.21 -0.27 -5.61 -7.07 -6.5
- - - - - - 4.32 - - - - - - - - - - - - -
-0.33 - -1.48 - -1.47 -0.5 3.08 -0.04 -0.18 -0.52 -1.63 -0.88 0.36 0.7 -2.39 -0.29 -1.05 -2.34 -1.12 -0.2
-0.97 - - - 1.45 - 3.44 -2.1 - -0.38 0.97 -0.85 -0.89 -1.33 - - - -0.0 -1.16 -
-9.66 - - -6.4 - 1.26 4.14 -10.79 - - - - - - - -8.4 -9.58 -9.86 - -9.78
-0.68 -0.25 -0.76 -0.59 -0.3 -2.25 3.15 -0.67 -0.25 -0.37 -0.96 -1.59 -1.37 -1.07 -0.58 -1.4 -2.21 -0.63 -0.18 -0.7
-1.16 -0.1 -0.38 -0.37 -0.56 -1.88 3.23 -0.84 -0.63 -0.78 -1.45 -1.67 -3.46 -2.52 -0.81 -1.14 -1.97 -0.49 0.47 -0.75
-1.1 -1.55 -1.8 -2.01 -1.29 -0.86 2.74 -1.98 -0.62 -1.05 0.9 -2.28 -2.77 -4.52 0.57 -0.13 -1.12 -0.81 -1.15 1.81
-1.22 1.26 -3.23 -2.57 -2.8 -2.81 4.02 -4.6 - - - - - - - - - -1.69 - -
-5.71 -6.04 -5.62 -3.49 -4.79 -1.15 4.23 -6.79 -7.46 -6.99 - -8.16 -7.93 -7.61 - -5.04 -7.62 -8.38 -8.07 -0.92
-4.59 - - -3.32 -6.51 -0.94 3.82 -2.86 -5.92 -4.86 -0.0 -3.03 -1.34 -2.03 0.7 -0.18 -1.28 -5.07 -6.61 -1.76
-0.46 -2.8 -0.73 - - 0.74 3.3 -1.32 -3.96 -1.62 -0.7 -2.4 - -3.42 -1.1 0.17 0.14 0.9 -3.54 -0.6
-5.06 -4.96 -9.45 -4.74 -4.44 2.36 3.86 -5.15 -8.27 -10.19 -6.49 -7.89 -9.17 -7.0 -7.98 -7.42 -5.27 -4.88 -5.42 -3.92
-0.76 -1.6 -1.99 0.53 0.01 -1.23 2.78 -0.25 -1.06 -1.32 -0.61 -0.15 -0.08 -0.2 -0.16 -1.0 -0.86 -0.24 -3.39 0.16
-1.41 -2.33 -1.79 -1.57 -1.39 -1.18 3.46 -3.03 -5.85 -5.96 - -5.18 -6.65 -6.29 -5.34 -3.9 -4.15 0.99 0.14 1.81
- - - -7.56 -7.62 2.74 3.73 -11.3 - - - - - - - - -8.77 -7.82 - -7.49
- - - -0.05 -2.6 - 3.77 -1.68 -1.01 -2.57 0.01 -3.71 -1.54 -1.89 -0.11 - - - -4.24 0.66
-0.38 -1.21 -1.56 -0.78 0.23 -0.67 2.42 -0.23 -0.46 -0.77 0.91 -1.28 0.01 -0.29 0.59 -1.49 -2.53 -1.04 0.25 -0.5
-2.83 -0.7 -2.3 - -2.45 -0.87 2.43 -0.34 1.12 1.32 0.82 -1.58 -1.94 -1.59 1.0 0.57 -2.13 -1.25 -2.0 -1.35
- - -1.35 - - 1.05 4.05 - - - - - - - - - - - -0.75 -1.44
-1.54 -2.87 -2.31 -2.54 -2.5 0.21 3.33 0.06 -0.74 -0.54 -0.57 -0.42 -1.47 -1.65 -0.45 0.01 -0.73 -4.61 -3.98 -0.21
- - - - - -0.44 4.27 - - - - - - - - - - - - -
-2.04 -5.41 -6.03 -6.67 -5.49 1.39 4.08 -5.36 -6.7 -6.09 -5.72 -5.56 - -8.01 -5.84 -5.29 -7.54 - -5.88 -5.52
-2.76 - -3.87 -1.69 -1.71 1.64 2.71 -0.07 -1.39 -0.92 0.4 -0.39 -0.76 -0.74 0.75 -1.28 -1.07 -2.62 -2.95 0.58
- -0.46 -1.63 - - 0.3 3.51 -1.71 -1.33 - - -0.95 0.78 -0.04 -0.19 -0.92 - - -1.15 -0.92
-6.7 - - - - -1.08 4.28 - - - - - - - - - - - -8.83 -2.89
-1.42 - - -0.69 -0.45 0.57 2.77 -0.88 -0.87 -1.35 -2.39 -3.62 0.32 0.75 -2.01 -2.33 -1.6 1.16 0.99 -1.88
-0.06 -0.6 -0.98 -1.37 -2.04 -1.47 4.05 -3.81 -6.08 -5.09 - -3.66 -8.52 -6.19 - - -6.27 -4.01 -4.37 -5.42
- - - 1.36 - - 3.87 -3.68 -1.04 - -0.45 - -1.52 -0.23 - - - - -1.76 -
- - - - - 1.24 4.13 -5.55 - - - - - -3.89 - - - - -3.8 -
-8.83 - - - - - 4.32 -12.4 - - - - -10.62 - - - - - -10.34 -
-0.63 -0.36 -1.18 -0.01 -0.21 0.52 1.43 0.55 -0.16 -0.25 0.32 -0.04 0.25 -0.07 0.45 0.32 -0.49 -0.82 -1.49 -1.66
-0.74 -1.15 -1.53 -0.19 -0.38 0.06 1.45 0.44 0.14 -0.01 0.39 0.11 0.28 0.03 0.47 0.62 -0.13 -1.03 -2.37 -0.81
-5.12 -3.46 -3.19 -4.25 - 2.22 3.85 -6.2 -6.38 - - - - -8.41 - - -4.87 -2.75 -2.17 -2.18
-5.32 -4.05 -5.73 -6.1 -4.91 -0.66 4.19 -4.49 -4.49 -5.3 -4.26 -2.23 -5.37 -4.66 -4.87 -6.93 -4.52 -6.95 -4.77 -1.47
-0.81 -1.67 -0.34 -2.09 -3.12 -1.15 3.77 -5.27 - - -5.17 - - - -6.48 - -5.47 -1.39 0.74 0.8
-1.9 0.87 -0.36 -0.93 -1.69 -3.66 1.77 -0.31 0.24 0.34 0.26 -1.03 1.36 1.01 0.09 -2.02 -2.12 -2.3 -2.21 0.39
- - - - - - 3.96 -1.88 - -0.8 - - -1.33 -0.38 - 1.3 - - - -
-1.21 0.4 -0.9 -0.99 -0.21 0.13 2.19 0.02 -0.23 -0.29 0.35 -0.53 0.17 -0.03 0.37 -0.25 -0.75 -0.24 -7.62 -1.55
0.49 -1.02 -1.06 -0.0 -1.42 1.45 3.43 -1.78 -6.0 -5.65 -3.23 -8.61 -5.11 -5.94 -2.88 -3.5 -3.42 0.15 -0.65 -2.43
- - - - - 0.97 3.61 -2.83 - - 0.2 -0.91 -2.47 -1.75 - - -0.81 -1.35 0.48 0.19
-0.55 0.97 -0.96 -1.98 -0.56 -1.14 3.37 -1.93 -1.28 -1.01 -1.6 -3.58 -2.15 -1.86 -1.46 -1.3 -2.31 -0.76 0.43 -3.15
-1.35 0.28 -0.93 -0.49 0.4 -0.4 2.91 -0.58 -1.11 -1.19 -0.67 -0.71 -0.82 -0.78 -0.34 -1.77 -1.2 -0.52 0.07 -1.6

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.