Heatmap: Cluster_285 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Cambium and expanding xylem
Cambium
Expanding xylem
Expanding and mature xylem
Maturing xylem
Maturing xylem and dead early wood
Wood
Dead early and late wood
Dead early wood
Dead late wood
Vegetative shoots - needles
Vegetative shoots - stem
Vegetative shoots
Girdled twig - stem
Dried twig - needles
Girdled twig - needles
Needles
Needles - dawn
Needles - later afternoon
Needles - midday
Needles - night
Buds
Female flower
Male flower
Pineapple galls
Somatic germinants - abnormal type
Somatic germinants - normal type
Cell culture - H20 - 5 days
Cell culture - KI added - 5 days
Cell culture - KI added - 20 days
Cell culture - KI removed - 4 days
Cell culture - KI removed - 12 days
Cell culture - solid medium
-10.35 - - - - - -10.3 -8.13 - - - - -6.55 - - - -3.55 - - - - - -7.08 -6.53 - 2.93 2.48 3.29 2.26 0.02 1.37 0.16 -1.62
-1.09 -2.21 -1.99 -2.27 - - -0.63 - - -4.2 -3.88 -1.56 -4.0 -0.77 - -5.03 -3.19 - -3.97 -4.04 - -5.04 -4.07 -1.29 - 1.79 2.5 -0.99 3.55 2.57 -0.1 -1.79 -0.27
- - -6.43 - - - -4.38 -7.21 -6.5 - -2.29 -1.36 -2.11 -2.77 -0.47 -1.12 -1.33 -1.82 -1.68 -1.99 -1.51 -1.83 -1.15 -6.61 -2.32 1.27 1.45 1.52 2.39 2.71 1.51 1.73 1.17
- - - - -9.19 - - - - - -7.98 -4.21 - -2.29 3.28 - -2.35 -1.85 - - -5.76 -2.39 -7.14 4.08 - -2.56 -2.83 -1.81 0.51 0.27 -0.81 -1.23 0.24
- - - - - -3.97 - -7.31 -5.01 - -1.89 - -1.32 -3.76 2.06 0.67 -3.9 -1.39 -0.59 -1.56 -0.55 -6.98 - -6.13 -2.52 1.43 1.53 0.18 2.86 2.48 1.5 0.47 -1.79
- - -5.07 - - - - -6.28 - - - -0.62 -0.92 -1.61 3.94 - -2.74 -1.65 - - - 0.71 -0.79 3.58 -0.21 -1.84 -2.18 -5.61 -5.39 -5.38 - - -
- - - - - - -2.13 -1.51 - - - -0.67 -2.72 -0.66 -1.66 - 0.02 - - -2.76 - 1.82 -0.79 1.41 -1.63 1.51 1.79 -1.87 3.72 0.79 -0.93 -3.48 -1.64
-0.87 -0.71 -0.89 -0.46 -0.19 0.26 -0.89 0.23 0.61 0.38 -0.53 -1.16 -0.25 -1.93 1.02 -0.43 -1.85 -0.94 -1.31 -0.64 -1.28 -1.09 0.61 1.55 -0.42 -0.69 -0.82 0.86 1.06 0.71 1.0 0.58 -0.3
- -6.52 - - - - - - -5.04 -4.8 0.03 -2.46 -0.84 -1.79 2.22 1.86 -1.14 -1.2 0.62 0.79 -0.42 -1.26 -0.61 -2.56 -1.14 0.7 0.92 0.65 2.09 0.83 0.91 0.79 0.33
- - - - - -7.88 -8.77 - - - -2.65 -4.95 -0.99 - 1.69 1.09 -4.32 -2.15 -1.2 -2.45 -1.59 -7.76 -5.87 3.05 -2.91 0.76 0.86 -0.65 2.48 2.04 1.27 -0.28 -1.99
-0.23 -1.02 0.21 0.53 -0.18 -1.55 -1.71 -0.55 -0.46 -0.56 -0.86 -3.26 -1.51 -1.81 0.48 -1.52 0.63 -0.07 -0.6 -0.77 -0.92 -2.75 -2.93 -1.14 -2.16 1.04 1.55 0.64 1.93 1.35 0.59 -0.56 1.05
0.17 0.89 -1.38 -1.85 -1.91 -2.46 1.04 -4.23 -4.31 -5.98 -3.34 -5.06 -3.49 - -3.08 -4.2 -0.62 -4.63 -4.02 -3.25 -3.93 -4.85 -2.96 3.2 -5.15 0.91 0.67 0.9 0.47 1.25 1.07 1.36 1.18
-2.19 -1.17 -5.78 -4.99 -5.75 - 1.38 -7.79 -4.35 - -3.33 -3.63 -3.69 - -4.48 -5.03 -0.66 -4.87 -2.11 -3.34 -2.54 -3.34 -3.06 3.22 -4.9 0.94 0.57 1.16 0.52 1.51 1.39 1.57 1.6
- - - - - - - - - - -1.92 - - -2.76 -1.76 -1.05 -2.8 - -1.8 -2.86 - -3.7 -2.89 3.46 - 1.65 1.68 1.53 1.87 1.38 0.8 0.18 0.76
-5.43 - - -6.42 -6.3 -3.16 -5.35 - -5.13 - -3.47 -1.46 -3.39 -0.28 -0.28 -0.9 -2.16 -3.91 -2.43 -0.85 -1.98 -2.27 -1.57 2.76 -6.27 2.0 2.03 1.04 1.61 1.35 1.35 1.01 0.18
-5.97 -4.07 -7.89 -1.14 -0.39 0.43 -4.16 -1.95 -0.95 -1.62 -1.91 -2.25 -5.06 0.41 0.01 -2.65 -1.89 -2.79 -3.27 -1.75 -1.98 -2.13 -1.88 1.86 -4.21 1.99 1.84 1.12 1.56 1.34 1.39 1.07 0.03
-1.71 -1.03 -4.45 -2.78 -3.24 -3.74 -1.34 -0.97 -0.65 -0.57 -0.84 1.34 -2.72 0.45 -0.1 -2.4 -0.19 -0.47 -0.95 -1.38 -0.67 0.81 0.27 -1.57 0.0 1.32 1.16 0.02 1.8 1.85 0.54 -0.16 0.34
-3.33 - - - - - - - - - - -3.6 - -0.27 -3.59 - -6.22 - - - - - -2.72 3.59 - 0.93 0.97 0.52 2.36 0.83 0.58 -0.15 2.34
-3.14 -2.95 -3.09 -0.87 -2.89 -1.55 -2.71 0.21 0.6 1.25 -3.11 1.9 -3.09 1.42 -2.45 -5.05 -1.76 - -4.99 - -3.28 0.5 -2.27 -1.34 -1.11 1.48 1.74 -0.91 1.69 1.83 -0.33 -1.94 1.1
- - - -1.42 -1.12 -2.88 - - - - - -1.73 -0.56 - 0.19 -1.22 -5.64 - - - - -0.11 - -1.97 0.57 2.03 2.24 1.98 2.98 1.03 1.44 -0.95 -0.16
-1.56 -2.58 -1.45 -0.15 -1.08 -0.03 -2.6 -1.02 -0.81 -1.35 -0.9 0.47 -2.34 -5.52 1.68 0.15 -3.25 -3.06 -1.01 -1.18 -0.94 -0.65 -2.71 2.12 -1.67 -1.11 -1.63 1.19 1.39 1.63 0.83 1.08 0.91
- - - - - - - -2.09 - - -3.66 - -3.05 - - - -6.72 -1.9 - - - - -3.68 - - 2.5 2.58 1.71 3.14 0.87 2.22 -1.22 0.66
- - - - - - - - - - 0.09 -1.68 0.28 -3.99 -1.67 1.56 -1.94 0.47 -0.85 -2.09 -1.25 -1.76 -1.79 2.48 -0.63 -0.09 0.32 1.05 1.59 2.04 1.38 1.04 0.48
- - - - - - - - -7.86 - - -3.79 -5.65 -1.84 2.86 - -2.63 -6.37 - - - -2.5 - 3.25 - -0.91 -0.7 -0.82 2.1 1.7 0.74 -0.21 1.89
-1.8 -1.97 -2.16 -1.01 -0.94 -0.03 -2.6 -0.6 -0.18 -0.2 -0.31 -1.26 -1.22 0.14 2.18 -0.22 -1.47 -1.55 -1.49 -0.68 -1.56 -0.04 0.08 2.68 -0.17 0.43 0.09 -1.32 0.42 0.04 -0.96 -0.48 0.84
- - - - - - - -1.0 - - - - - - - - -7.64 - - - - - - - - 1.81 2.49 -1.46 4.41 -0.56 -0.26 - -2.13
- - - -5.77 -9.37 -7.09 -6.39 - -6.47 -4.14 0.69 -0.95 -0.32 -2.45 2.32 2.33 -3.55 1.09 1.28 0.15 1.46 -1.78 -2.96 -4.01 -0.32 -1.49 -1.5 -0.52 1.67 1.51 0.21 -0.39 -0.71
0.65 1.45 -1.67 -1.04 -0.86 -0.49 -0.13 -3.48 -3.1 -0.91 -2.19 0.17 -0.56 -1.02 -2.86 -4.34 -0.44 - -2.89 -5.35 -3.0 0.58 0.19 3.65 -0.74 0.66 0.87 -1.58 -1.48 -1.36 -1.82 -2.1 -1.11
-0.04 0.0 -2.11 -1.88 -3.64 -3.74 -0.18 -4.06 -2.88 -3.15 0.98 -1.66 0.55 -1.13 -2.14 0.32 0.39 0.58 0.31 -0.55 -0.23 -0.89 -0.29 2.29 -0.46 0.82 0.77 0.56 0.41 0.47 0.14 0.06 0.22
- - - - - - - - - - -1.64 -2.54 -1.65 -6.06 2.6 -1.04 -1.42 -0.64 -0.84 -0.73 -1.26 -3.09 - -3.73 -1.53 1.67 1.31 1.09 1.98 2.57 0.83 0.11 0.97
- -3.33 - - - -4.39 -4.09 - - - -0.42 -0.07 - 1.94 -2.38 -2.12 -1.21 -1.31 -2.41 -0.38 -1.04 -0.8 0.36 -3.29 -3.0 1.33 1.22 0.8 2.12 2.31 0.45 1.03 1.66
-1.73 -1.06 -3.26 -3.26 -2.54 -1.61 -2.1 -1.77 -1.41 -3.13 0.67 0.38 -0.03 -2.31 2.11 1.67 -2.64 0.75 1.0 -0.42 0.99 0.35 -0.54 -2.5 0.01 -0.85 -0.75 0.53 0.96 0.81 0.42 -0.14 -0.6
- -4.05 - - -5.28 - - - - -3.94 -1.88 -3.43 -0.37 -1.17 3.19 0.58 -0.4 -0.3 -0.13 -5.52 -0.58 -1.94 2.71 2.86 -0.92 -2.15 -1.37 -1.16 -2.09 -4.16 0.13 -1.27 -6.4
- - - - - - - - - - - - - - - - - - - - - - - - - 2.61 3.08 1.66 2.55 -0.1 2.9 - 0.04
- - - - - - - - -4.36 - 1.23 -0.56 -0.19 -1.36 2.53 2.89 -3.71 1.67 1.7 0.87 0.16 -1.71 - - -1.32 -2.52 -1.04 -0.63 0.04 0.44 -0.46 -0.51 -2.3
-5.2 -7.02 -5.0 -6.23 -7.42 -5.52 -3.74 -5.93 -5.12 -6.69 0.83 -1.34 0.26 -4.71 2.03 2.17 -2.4 1.25 1.48 0.3 1.45 -0.63 -4.2 -3.03 -0.19 -2.05 -1.75 0.52 1.43 1.03 -0.04 0.04 0.04
- -5.38 - -6.35 - - - -4.02 - -5.0 -2.67 -2.12 -4.06 -0.02 3.98 -1.66 -3.49 -2.69 -1.35 -2.21 -1.39 0.12 -4.69 3.19 -3.53 -2.06 -2.27 -0.71 -0.78 -2.15 0.29 -0.6 -3.91
- - - - - - -9.96 - - - -1.4 -5.78 0.0 -7.36 2.51 2.14 -4.34 0.29 -0.21 -1.27 -0.54 -4.78 -9.06 1.12 -1.26 0.42 0.51 -0.56 2.37 1.93 1.08 -0.34 -1.9
- - - - -9.31 - -7.02 -7.85 - -7.03 1.01 -0.07 -0.4 - 2.76 2.86 -4.8 0.5 1.57 0.55 1.05 -0.68 -3.31 - -0.38 -2.03 -1.84 -0.54 0.74 0.25 -0.86 -0.79 -0.9
- - - - -2.4 -1.91 - 0.51 0.24 1.98 - -0.88 - 0.55 0.13 - - - - - - - - - - 1.61 2.37 -0.15 2.41 2.22 0.94 -0.58 0.25
0.04 0.26 -2.14 -0.54 -0.86 -0.25 -0.53 -1.55 -2.81 -2.7 0.29 -0.87 -1.34 0.6 -0.81 1.53 -2.63 0.79 -1.52 0.12 0.13 -2.08 -3.77 -3.56 -1.96 0.89 0.81 0.76 2.28 0.85 0.52 -0.16 -0.66
-0.32 0.37 -2.78 -3.41 -2.41 -3.36 0.42 -3.48 -3.05 -2.95 0.28 0.54 -0.95 -2.11 -1.76 -1.07 -1.6 -0.74 -0.88 -0.96 -1.1 -1.61 -3.93 2.91 1.22 0.91 0.97 0.59 0.05 0.54 0.6 0.62 -0.06
- - - - - - - 0.56 -2.09 - 0.76 - - - 3.62 - -2.45 1.79 0.1 0.04 2.79 - - 2.07 - -4.32 -1.24 - - - - - -
-1.98 -2.16 -2.23 -0.86 -0.34 -0.05 -1.43 -1.39 -2.18 -3.05 -3.84 0.46 -1.6 -0.15 -6.13 -3.97 -2.12 -3.01 -5.58 -6.9 -4.29 1.01 0.17 2.55 -0.99 1.51 1.51 0.9 1.12 1.01 1.0 0.56 -0.08
- - - - - - - - - - -4.44 - -2.84 - 1.66 0.38 -3.47 -1.26 - -3.43 -1.82 - -3.46 2.19 - 1.53 1.91 -0.68 2.48 2.41 1.85 -0.22 -2.3
-3.31 -3.22 -3.76 -4.5 -3.79 -3.43 -1.96 -3.15 -5.7 -1.07 -3.29 -1.64 -3.05 0.03 3.69 -2.8 -2.83 -0.68 -3.33 -1.52 -1.7 -0.05 -1.76 2.85 -2.26 -2.24 -2.14 0.2 -0.2 -0.67 0.6 0.5 -0.33
-1.7 -1.26 -1.2 -1.08 0.09 -0.72 -0.46 -0.47 -1.54 -1.68 -0.86 -0.31 0.06 -0.69 0.76 -0.34 -0.14 -0.65 -0.97 -0.61 -0.53 0.02 0.68 0.61 -0.28 1.1 0.87 1.05 0.93 0.33 0.79 0.58 0.36
-9.77 -9.4 -9.63 -10.86 -8.85 -8.22 -4.26 -8.33 -7.67 - 0.78 -1.67 -0.54 -3.54 2.22 2.37 -2.59 1.29 1.66 0.96 1.55 -1.72 -2.86 -4.73 -0.78 -1.55 -1.36 0.33 1.24 0.76 -0.22 -0.3 -0.19
-6.78 -7.07 -8.72 - -9.8 - -6.88 -9.31 - -6.97 0.14 -1.85 0.2 -3.41 2.93 2.51 -3.12 0.83 0.85 0.02 0.48 0.13 -3.32 -2.5 -0.48 -1.43 -1.46 0.63 0.83 0.77 0.11 0.31 -0.45
-7.12 -7.46 -10.01 -10.03 -7.49 -7.35 -9.46 - -7.02 -5.2 -7.67 -8.45 - - - -7.31 -6.18 - - - -7.28 - - -5.82 -8.4 2.47 2.49 -0.22 3.65 2.33 -0.27 -1.41 1.03
-9.54 -9.47 - -2.29 -1.48 -7.01 - 0.66 0.54 0.41 0.11 0.7 -3.19 0.81 -1.25 -1.14 -0.35 -0.52 -0.55 -1.31 -1.06 -3.16 -3.84 -1.58 -2.37 1.47 2.71 -2.28 2.82 0.74 -1.19 -3.91 -3.41
-3.51 -4.84 -2.43 -1.96 -1.57 -1.79 -2.75 0.75 0.18 1.45 0.17 -1.88 -1.43 -6.2 3.22 1.06 -2.07 0.19 0.41 -0.08 0.7 -2.52 -2.72 2.42 -1.01 -2.81 -2.29 -1.91 -4.14 -5.01 -2.04 -1.16 -3.85
- -5.81 -6.9 -3.79 -8.56 - -6.28 -4.81 -7.62 -2.36 -3.93 1.07 -3.13 1.53 -1.17 -1.22 -2.19 -1.69 -2.55 -1.67 -1.96 1.36 -2.88 2.11 -0.01 1.4 1.17 -0.77 1.36 2.28 0.7 -0.43 1.04
- - - - - - - - - - -2.31 -2.42 -0.94 - 1.8 -0.47 -3.11 -1.27 -1.31 -1.25 -0.45 -2.16 - -1.53 -2.12 1.79 1.31 1.0 2.1 3.06 0.7 -0.46 1.07
- - - - -3.52 - - - - - -2.37 - - - 0.9 0.64 -1.51 -1.2 -0.3 -2.37 0.99 -2.21 - - -1.23 2.23 2.2 -1.07 2.38 1.73 0.85 1.17 1.36
- -4.27 - - -9.19 - -2.73 - - - -2.9 - - -3.08 2.06 -3.51 -2.53 -0.98 - -3.52 -2.14 -6.98 - -1.93 - 1.34 0.99 0.84 1.7 3.18 1.8 -0.04 1.97
-3.17 -4.01 -3.9 -3.94 -3.04 -2.84 -2.69 -3.28 -3.29 -1.44 -2.36 -1.26 -2.77 -1.01 3.41 -2.13 -2.86 -0.36 -2.0 -1.79 -1.56 -0.58 -2.37 2.69 -1.94 -1.92 -2.48 0.53 0.99 0.69 0.89 0.27 0.7
- - -7.01 -4.13 -3.17 -2.0 -3.9 -2.42 -5.5 -0.02 -0.85 0.42 -0.46 -1.65 -0.32 -1.59 -2.02 -2.64 -2.61 -1.74 -2.65 1.03 -1.68 2.78 -0.44 1.22 1.09 0.89 1.6 1.29 0.77 0.47 0.46
-1.71 -1.35 -2.47 -1.9 -1.66 -3.9 -0.8 -1.43 -2.3 -1.02 -0.17 0.37 -1.12 -0.27 -0.38 -0.31 -0.67 0.14 -0.85 -0.41 0.16 0.21 -1.08 2.17 -0.69 0.6 0.33 0.76 1.09 1.07 0.73 0.14 1.28
0.37 0.88 -0.88 -1.57 -1.42 -1.61 0.39 -2.27 -2.19 -2.86 -1.0 0.48 -0.61 -0.11 -1.05 -1.51 -0.03 -1.75 -2.8 -3.39 -2.24 0.53 0.28 2.61 0.05 0.95 0.78 -0.05 -0.03 0.3 0.29 0.16 0.49
- - - - - - - - - - - - - - - - -0.49 - - - - - - - - 2.93 3.63 0.74 2.54 -0.8 1.84 - -0.57
0.31 0.84 -2.23 -2.07 -1.96 -2.4 1.49 -2.52 -3.25 -2.07 -2.57 1.19 -1.54 0.52 -1.44 -1.93 -1.13 -2.77 -2.79 -3.37 -3.34 -1.4 0.01 3.08 -0.91 -0.14 -0.03 0.54 0.38 0.4 0.45 0.19 0.1

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.