Heatmap: Cluster_173 (HCCA)

View as: (view raw or zlog-transformed)

View using InCHLib : here ( Experimental feature, still under development)

(Values are normalized against highest expression of the row)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00003p00267650 (evm_27.TU.AmTr_v1.0_scaffold00003.391)
0.0 0.0 0.0 0.0 0.28 0.38 1.0 0.0 0.27 0.29 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00005p00170100 (evm_27.TU.AmTr_v1.0_scaffold00005.53)
0.0 0.0 0.0 0.0 0.51 1.0 0.0 0.0 0.38 0.14 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.44 0.0
0.04 0.07 0.23 0.53 0.18 1.0 0.4 0.71 0.56 0.72 0.01 0.0 0.02 0.18 0.09 0.0 0.02 0.0 0.0 0.03 0.0 0.03
AMTR_s00009p00085980 (evm_27.TU.AmTr_v1.0_scaffold00009.31)
0.0 0.0 0.0 0.0 0.0 1.0 0.13 0.29 0.48 0.42 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00009p00231850 (evm_27.TU.AmTr_v1.0_scaffold00009.184)
0.08 0.4 0.2 0.11 0.25 1.0 0.57 0.37 0.61 0.57 0.53 0.47 0.27 0.36 0.19 0.23 0.47 0.3 0.33 0.21 0.29 0.18
AMTR_s00011p00211710 (evm_27.TU.AmTr_v1.0_scaffold00011.83)
0.0 0.37 0.0 0.05 1.0 0.36 0.0 0.0 0.01 0.01 0.02 0.06 0.08 0.28 0.49 0.01 0.0 0.01 0.02 0.04 0.01 0.11
AMTR_s00012p00256540 (evm_27.TU.AmTr_v1.0_scaffold00012.296)
0.32 0.03 0.2 0.0 0.14 0.37 0.4 0.13 1.0 0.5 0.02 0.06 0.02 0.27 0.16 0.0 0.0 0.0 0.0 0.12 0.0 0.01
AMTR_s00013p00201430 (evm_27.TU.AmTr_v1.0_scaffold00013.137)
0.0 0.0 0.0 0.0 0.58 1.0 0.09 0.0 0.06 0.07 0.0 0.06 0.02 0.02 0.13 0.04 0.01 0.0 0.01 0.61 0.0 0.01
AMTR_s00017p00208690 (evm_27.TU.AmTr_v1.0_scaffold00017.131)
0.0 0.0 0.0 0.0 0.0 0.59 0.25 0.12 1.0 0.53 0.0 0.0 0.0 0.04 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00017p00208730 (evm_27.TU.AmTr_v1.0_scaffold00017.132)
0.0 0.0 0.0 0.0 0.0 0.54 0.2 0.0 1.0 0.53 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01
AMTR_s00022p00113930 (evm_27.TU.AmTr_v1.0_scaffold00022.103)
0.0 0.0 0.0 0.0 0.04 0.43 0.37 0.29 0.27 1.0 0.09 0.21 0.0 0.08 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00023p00181580 (evm_27.TU.AmTr_v1.0_scaffold00023.119)
0.0 0.0 0.0 0.0 0.04 0.5 0.53 0.26 1.0 0.88 0.02 0.02 0.0 0.08 0.01 0.0 0.13 0.0 0.01 0.01 0.0 0.07
AMTR_s00024p00066670 (evm_27.TU.AmTr_v1.0_scaffold00024.26)
0.36 0.05 0.21 0.08 0.37 0.78 0.54 0.33 1.0 0.88 0.32 0.22 0.34 0.66 0.49 0.05 0.27 0.12 0.05 0.05 0.06 0.16
AMTR_s00025p00209050 (evm_27.TU.AmTr_v1.0_scaffold00025.274)
0.0 0.0 0.0 0.03 0.18 1.0 0.22 0.16 0.21 0.21 0.04 0.05 0.05 0.06 0.09 0.12 0.05 0.16 0.17 0.6 0.13 0.11
AMTR_s00029p00036300 (evm_27.TU.AmTr_v1.0_scaffold00029.20)
0.0 0.0 0.0 0.0 0.07 1.0 0.19 0.42 0.32 0.22 0.01 0.02 0.01 0.02 0.01 0.0 0.03 0.0 0.0 0.0 0.0 0.01
AMTR_s00029p00087270 (evm_27.TU.AmTr_v1.0_scaffold00029.79)
0.0 0.0 0.0 0.22 0.73 1.0 0.0 0.0 0.03 0.02 0.0 0.0 0.0 0.0 0.12 0.0 0.0 0.0 0.0 0.0 0.0 0.03
AMTR_s00029p00134930 (evm_27.TU.AmTr_v1.0_scaffold00029.154)
0.0 0.0 0.0 0.0 0.41 1.0 0.97 0.42 0.89 0.62 0.08 0.08 0.11 0.14 0.15 0.03 0.25 0.07 0.05 0.16 0.04 0.2
AMTR_s00030p00233590 (evm_27.TU.AmTr_v1.0_scaffold00030.191)
0.15 0.26 0.0 0.26 0.22 1.0 1.0 0.65 0.71 0.66 0.05 0.12 0.05 0.18 0.06 0.05 0.02 0.02 0.04 0.04 0.05 0.33
AMTR_s00033p00171350 (evm_27.TU.AmTr_v1.0_scaffold00033.119)
0.0 0.0 0.0 0.0 0.01 0.7 0.68 0.27 1.0 0.45 0.03 0.24 0.0 0.16 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.01
AMTR_s00034p00079510 (evm_27.TU.AmTr_v1.0_scaffold00034.19)
0.21 0.37 0.39 0.05 1.0 0.87 0.19 0.17 0.14 0.17 0.29 0.33 0.45 0.29 0.57 0.37 0.37 0.2 0.24 0.36 0.12 0.32
AMTR_s00034p00097160 (evm_27.TU.AmTr_v1.0_scaffold00034.27)
0.0 0.0 0.12 0.02 1.0 0.85 0.08 0.0 0.07 0.07 0.12 0.08 0.14 0.06 0.15 0.05 0.09 0.07 0.08 0.05 0.01 0.07
AMTR_s00036p00087490 (evm_27.TU.AmTr_v1.0_scaffold00036.32)
0.0 0.0 0.0 0.0 0.53 0.54 1.0 0.34 0.64 0.38 0.01 0.18 0.0 0.13 0.17 0.0 0.0 0.0 0.0 0.0 0.0 0.01
AMTR_s00038p00212600 (evm_27.TU.AmTr_v1.0_scaffold00038.172)
0.0 0.0 0.0 0.0 0.18 0.69 0.44 0.0 1.0 0.39 0.01 0.0 0.01 0.03 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.05
AMTR_s00038p00214300 (evm_27.TU.AmTr_v1.0_scaffold00038.174)
0.0 0.0 0.0 0.0 0.7 1.0 0.05 0.0 0.04 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00041p00021370 (evm_27.TU.AmTr_v1.0_scaffold00041.8)
0.0 0.0 0.0 0.0 0.0 0.43 0.75 0.0 1.0 0.54 0.01 0.0 0.0 0.16 0.03 0.0 0.02 0.0 0.0 0.02 0.0 0.05
AMTR_s00048p00184670 (evm_27.TU.AmTr_v1.0_scaffold00048.138)
0.0 0.11 0.06 0.19 0.12 1.0 0.39 0.38 0.49 0.44 0.51 0.61 0.07 0.11 0.03 0.02 0.93 0.08 0.03 0.01 0.03 0.25
AMTR_s00049p00127890 (evm_27.TU.AmTr_v1.0_scaffold00049.103)
0.14 0.27 0.02 0.0 0.06 1.0 0.58 0.61 0.64 0.66 0.1 0.18 0.13 0.17 0.08 0.07 0.04 0.1 0.15 0.09 0.05 0.23
AMTR_s00050p00077080 (evm_27.TU.AmTr_v1.0_scaffold00050.16)
0.0 0.08 0.31 0.37 0.15 1.0 0.07 0.76 0.41 0.2 0.0 0.0 0.0 0.02 0.01 0.0 0.0 0.0 0.0 0.0 0.61 0.01
AMTR_s00054p00196360 (evm_27.TU.AmTr_v1.0_scaffold00054.75)
0.0 0.0 0.13 0.0 0.04 0.91 0.38 1.0 0.72 0.84 0.0 0.0 0.01 0.05 0.01 0.0 0.0 0.0 0.01 0.01 0.01 0.01
AMTR_s00061p00202530 (evm_27.TU.AmTr_v1.0_scaffold00061.247)
0.09 0.0 0.0 0.0 0.12 1.0 0.34 0.65 0.89 0.59 0.0 0.05 0.0 0.04 0.16 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.01 0.06 0.0 0.76 1.0 0.06 0.26 0.1 0.09 0.23 0.16 0.32 0.21 0.16 0.11 0.18 0.23 0.14 0.15 0.9 0.12
AMTR_s00065p00181400 (evm_27.TU.AmTr_v1.0_scaffold00065.154)
0.36 0.43 0.46 0.03 1.0 0.93 0.32 0.3 0.36 0.35 0.46 0.43 0.35 0.35 0.48 0.45 0.26 0.33 0.34 0.36 0.29 0.28
AMTR_s00067p00188080 (evm_27.TU.AmTr_v1.0_scaffold00067.200)
0.0 0.0 0.0 0.0 0.03 0.88 0.73 0.0 1.0 0.85 0.33 0.0 0.06 0.35 0.03 0.0 0.19 0.0 0.0 0.02 0.0 0.5
AMTR_s00068p00111870 (evm_27.TU.AmTr_v1.0_scaffold00068.62)
0.07 0.0 0.0 0.0 0.0 0.38 0.51 0.08 1.0 0.77 0.0 0.0 0.0 0.25 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00079p00063830 (evm_27.TU.AmTr_v1.0_scaffold00079.20)
0.0 0.0 0.0 0.0 1.0 0.74 0.06 0.04 0.07 0.15 0.07 0.05 0.66 0.02 0.3 0.0 0.08 0.12 0.0 0.01 0.0 0.66
AMTR_s00079p00122650 (evm_27.TU.AmTr_v1.0_scaffold00079.48)
0.19 0.38 0.0 0.0 0.19 0.58 0.62 0.44 1.0 0.7 0.0 0.0 0.06 0.37 0.08 0.0 0.0 0.0 0.01 0.03 0.0 0.11
AMTR_s00079p00183380 (evm_27.TU.AmTr_v1.0_scaffold00079.103)
0.0 0.0 0.0 0.0 0.04 0.96 0.43 0.2 1.0 0.57 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00080p00054810 (evm_27.TU.AmTr_v1.0_scaffold00080.16)
0.09 0.0 0.0 0.01 0.09 1.0 0.36 0.09 0.46 0.36 0.31 0.31 0.1 0.13 0.05 0.04 0.77 0.09 0.05 0.02 0.04 0.13
AMTR_s00082p00123350 (evm_27.TU.AmTr_v1.0_scaffold00082.27)
0.05 0.0 0.07 0.0 0.01 1.0 0.27 0.99 0.25 0.3 0.0 0.0 0.01 0.04 0.12 0.31 0.0 0.05 0.02 0.0 0.0 0.0
AMTR_s00085p00094520 (evm_27.TU.AmTr_v1.0_scaffold00085.55)
0.0 0.0 0.0 0.0 0.02 0.73 0.17 0.26 0.64 1.0 0.0 0.0 0.01 0.12 0.02 0.0 0.0 0.0 0.0 0.03 0.0 0.01
AMTR_s00087p00070530 (evm_27.TU.AmTr_v1.0_scaffold00087.18)
0.0 0.0 0.0 0.0 1.0 0.41 0.0 0.0 0.0 0.01 0.02 0.03 0.05 0.02 0.22 0.01 0.05 0.01 0.03 0.1 0.0 0.19
AMTR_s00098p00038500 (evm_27.TU.AmTr_v1.0_scaffold00098.4)
0.0 0.0 1.0 0.33 0.22 0.62 0.0 0.26 0.03 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00098p00142430 (evm_27.TU.AmTr_v1.0_scaffold00098.41)
0.38 0.26 0.0 0.0 0.17 1.0 0.41 0.15 0.72 0.48 0.28 0.2 0.11 0.13 0.09 0.08 0.1 0.17 0.15 0.06 0.13 0.09
AMTR_s00116p00140640 (evm_27.TU.AmTr_v1.0_scaffold00116.43)
0.0 0.0 0.0 0.0 0.65 1.0 0.07 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.09 0.0 0.0
AMTR_s00127p00029000 (evm_27.TU.AmTr_v1.0_scaffold00127.4)
0.0 0.0 0.0 0.0 0.05 1.0 0.27 0.0 0.65 0.45 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00128p00095650 (evm_27.TU.AmTr_v1.0_scaffold00128.26)
0.0 0.0 0.0 0.0 0.56 1.0 0.27 0.0 0.08 0.05 0.0 0.0 0.05 0.39 0.37 0.0 0.0 0.0 0.0 0.26 0.0 0.0
AMTR_s00154p00051340 (evm_27.TU.AmTr_v1.0_scaffold00154.33)
0.17 0.0 0.16 0.03 0.15 1.0 0.22 0.42 0.46 0.51 0.1 0.18 0.19 0.04 0.11 0.03 0.1 0.12 0.13 0.0 0.05 0.01
AMTR_s00154p00051660 (evm_27.TU.AmTr_v1.0_scaffold00154.34)
0.22 0.0 0.0 0.0 0.11 0.6 0.34 0.42 1.0 0.9 0.05 0.14 0.1 0.11 0.09 0.04 0.12 0.1 0.05 0.0 0.1 0.01
AMTR_s00190p00012330 (evm_27.TU.AmTr_v1.0_scaffold00190.1)
0.05 0.03 0.0 0.0 0.07 1.0 0.09 0.49 0.05 0.04 0.23 0.08 0.08 0.01 0.02 0.01 0.02 0.06 0.03 0.01 0.0 0.13
AMTR_s00217p00020070 (evm_27.TU.AmTr_v1.0_scaffold00217.5)
0.02 0.01 0.0 0.02 0.04 0.4 0.43 0.21 1.0 0.91 0.15 0.29 0.62 0.38 0.44 0.3 0.06 0.18 0.16 0.16 0.1 0.07
AMTR_s00790p00010560 (evm_27.TU.AmTr_v1.0_scaffold00790.1)
0.0 0.0 0.0 0.0 1.0 0.66 0.0 0.0 0.02 0.0 0.43 0.0 0.0 0.02 0.04 0.0 0.1 0.0 0.0 0.0 0.0 0.0
AMTR_s03028p00008020 (evm_27.TU.AmTr_v1.0_scaffold03028.1)
0.17 0.39 0.06 0.03 1.0 0.64 0.31 0.24 0.48 0.36 0.37 0.57 0.29 0.34 0.36 0.38 0.39 0.28 0.22 0.35 0.33 0.41

Details

Expression values normalized per gene (using the maximum value, Green cells indicate low expression and red high. (Dark gray cells indicate missing values)