Heatmap: Cluster_198 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00003p00041030 (evm_27.TU.AmTr_v1.0_scaffold00003.22)
- - - - 2.94 - - - - - - - - - - - 3.84 - - - - -
AMTR_s00006p00065810 (evm_27.TU.AmTr_v1.0_scaffold00006.21)
- - - - 2.64 - - - - - - - - - - - 3.54 - - 2.04 - -
AMTR_s00006p00180220 (evm_27.TU.AmTr_v1.0_scaffold00006.74)
- - - - 1.73 - -1.94 - -1.16 0.53 - - 0.84 -0.92 2.53 - 2.71 - - 0.74 - -2.13
AMTR_s00006p00252160 (evm_27.TU.AmTr_v1.0_scaffold00006.159)
- -0.53 - 1.17 1.95 - -4.25 -6.44 -3.12 -2.66 -0.64 0.14 -0.95 -2.0 1.91 -4.01 2.76 -0.47 -3.09 -2.65 -0.8 -2.64
AMTR_s00007p00268160 (evm_27.TU.AmTr_v1.0_scaffold00007.388)
- - - - 0.4 - 0.77 - 0.42 1.31 0.57 - 1.27 -0.33 0.59 - 0.22 - - 1.63 2.01 -0.53
AMTR_s00008p00183250 (evm_27.TU.AmTr_v1.0_scaffold00008.102)
- - - - 2.03 - - - - - - - 1.08 -2.9 2.02 - 2.34 - - - 2.71 -
AMTR_s00008p00241240 (evm_27.TU.AmTr_v1.0_scaffold00008.165)
- - - - 1.78 - - - 0.69 - - - 0.86 - 0.21 - 3.66 - - - - 0.46
AMTR_s00008p00247580 (evm_27.TU.AmTr_v1.0_scaffold00008.182)
1.15 1.02 - - -0.02 - -1.37 - 0.62 0.17 -1.75 0.43 0.69 0.89 -0.06 -0.33 1.03 0.04 -1.01 -0.93 0.66 0.24
AMTR_s00008p00259810 (evm_27.TU.AmTr_v1.0_scaffold00008.207)
- - - - 0.75 - -0.45 - 1.31 1.3 - - -1.27 -0.42 2.23 - 1.88 - - 0.2 - 1.99
- - - - 0.91 - - - -4.22 - 0.4 - 0.08 -1.72 -0.61 0.08 2.63 - 0.38 1.1 2.29 0.2
AMTR_s00009p00261080 (evm_27.TU.AmTr_v1.0_scaffold00009.329)
- - - - 3.39 - - - - - - - -1.75 - -1.47 - 3.44 - - - - -
AMTR_s00011p00169480 (evm_27.TU.AmTr_v1.0_scaffold00011.49)
- - - - 1.39 - - - -3.12 -1.9 - 0.67 0.35 0.53 -0.67 - 1.81 1.48 -0.5 2.14 1.32 -2.95
AMTR_s00012p00213210 (evm_27.TU.AmTr_v1.0_scaffold00012.151)
- - - - 2.46 - - - - - - - 2.99 - - - 1.63 - 2.44 - - -
AMTR_s00013p00226810 (evm_27.TU.AmTr_v1.0_scaffold00013.171)
2.47 - - - 0.41 - -1.69 - -0.53 -0.66 - - 1.47 -2.15 1.91 - 0.49 -1.32 -2.3 -0.11 1.53 -0.08
AMTR_s00013p00247680 (evm_27.TU.AmTr_v1.0_scaffold00013.216)
- - - 0.75 2.09 - -1.82 - -2.27 -1.36 - - 0.71 -0.53 -0.31 - 2.59 1.42 - -0.9 1.26 -1.18
AMTR_s00013p00254830 (evm_27.TU.AmTr_v1.0_scaffold00013.242)
- - - - 3.02 - - - - - - - 2.06 -0.0 0.63 - 2.85 - - - - -
AMTR_s00015p00236110 (evm_27.TU.AmTr_v1.0_scaffold00015.89)
- - - - 1.58 - -1.63 - -2.07 -1.31 - - 0.81 -1.21 -1.91 - 2.78 - - 0.03 2.83 -0.67
AMTR_s00018p00049780 (evm_27.TU.AmTr_v1.0_scaffold00018.14)
- - - - 2.07 - -2.2 - 0.12 -0.65 1.05 - 1.89 -0.35 0.69 - 0.22 - - 1.12 0.86 1.34
AMTR_s00021p00129030 (evm_27.TU.AmTr_v1.0_scaffold00021.81)
- - - - 2.53 - - - 0.24 - - - - - -0.21 - 3.83 - - - - -
AMTR_s00021p00206940 (evm_27.TU.AmTr_v1.0_scaffold00021.177)
- - - - 1.43 - - - - - - - 0.86 -0.59 -0.32 - 3.07 - - 2.51 - 0.97
AMTR_s00024p00021400 (evm_27.TU.AmTr_v1.0_scaffold00024.6)
-3.02 -1.93 -1.07 -1.22 0.03 -1.34 -2.03 - -1.13 -1.5 -0.38 - 0.5 0.83 0.66 0.95 1.59 0.79 -0.58 1.51 0.63 -0.06
AMTR_s00025p00197020 (evm_27.TU.AmTr_v1.0_scaffold00025.249)
- - - - - - - - - - - - - - - - 4.46 - - - - -
AMTR_s00026p00235040 (evm_27.TU.AmTr_v1.0_scaffold00026.130)
- - - - 1.91 - -1.71 - - - -0.57 1.17 0.85 -3.08 -1.51 1.6 1.11 - 1.58 -0.12 0.82 0.89
AMTR_s00033p00030080 (evm_27.TU.AmTr_v1.0_scaffold00033.13)
- 0.81 - -1.82 1.03 - -0.06 - 0.37 -0.08 0.32 - 1.31 1.09 -0.08 - 0.69 - -1.26 0.45 1.33 1.0
AMTR_s00034p00063060 (evm_27.TU.AmTr_v1.0_scaffold00034.14)
- - - 0.26 0.7 - - - - - - - - -0.69 - - 3.43 - 2.47 1.15 - -
AMTR_s00039p00071790 (evm_27.TU.AmTr_v1.0_scaffold00039.32)
- - - - 1.53 - -1.21 - -0.25 0.86 - - 0.68 0.45 1.87 - 2.02 0.82 -0.15 0.93 - -0.37
AMTR_s00039p00222360 (evm_27.TU.AmTr_v1.0_scaffold00039.195)
- - - -0.1 0.05 - - - -4.03 - 1.09 1.28 1.16 - -3.87 - 2.3 - 1.58 1.95 - 0.4
AMTR_s00042p00076170 (evm_27.TU.AmTr_v1.0_scaffold00042.16)
- - - - 2.09 1.13 -1.08 -0.21 -1.49 -2.24 0.15 - -1.62 -1.94 0.05 - 2.42 - 0.72 -0.24 1.54 -2.52
AMTR_s00043p00107180 (evm_27.TU.AmTr_v1.0_scaffold00043.17)
- - - - 1.65 - -3.85 - -2.62 -1.9 0.44 - -0.17 -0.48 -0.54 - 2.12 - -0.48 0.52 2.93 -0.78
AMTR_s00045p00226350 (evm_27.TU.AmTr_v1.0_scaffold00045.324)
- - - - 2.02 - -1.6 - -0.95 -0.37 - - 0.4 -0.97 0.56 - 2.47 - 0.88 0.6 1.7 -0.22
AMTR_s00052p00068830 (evm_27.TU.AmTr_v1.0_scaffold00052.10)
- - - - 3.08 - - - -0.75 - - - - - 2.66 - 2.43 - - 0.34 - -
AMTR_s00057p00205300 (evm_27.TU.AmTr_v1.0_scaffold00057.243)
0.84 - 0.14 - -0.75 - -1.24 - -1.16 -0.99 0.21 0.38 0.43 0.62 0.59 -0.18 -1.6 0.77 0.89 1.15 0.03 1.19
- - - - 2.3 - 0.25 - -0.59 -2.05 2.07 - - -2.32 0.75 - 2.96 - - -1.58 - -0.35
AMTR_s00063p00082020 (evm_27.TU.AmTr_v1.0_scaffold00063.8)
- - - -4.83 1.43 - -3.56 - -1.59 -1.59 -1.17 - 1.08 1.32 1.27 - 1.7 -0.6 - 1.96 - 1.71
AMTR_s00067p00154820 (evm_27.TU.AmTr_v1.0_scaffold00067.150)
- - - - 2.02 - - - - - 2.0 - - -1.65 1.34 - 2.38 - 1.42 1.69 - -
-0.94 -0.28 -2.35 -1.45 0.84 - -7.16 -9.4 -2.23 -2.83 -0.38 -1.36 1.19 1.8 0.9 -0.4 1.79 -1.59 0.34 0.65 -1.78 0.57
AMTR_s00072p00101810 (evm_27.TU.AmTr_v1.0_scaffold00072.48)
- - - - -2.3 - -1.58 - 0.6 0.39 - - 0.82 -0.47 2.94 - 2.59 - -0.42 -0.04 - -0.48
AMTR_s00079p00028000 (evm_27.TU.AmTr_v1.0_scaffold00079.6)
- - - - 3.24 - - - - -1.92 - - 0.23 1.21 1.74 - 2.27 - - - - -0.61
AMTR_s00082p00133770 (evm_27.TU.AmTr_v1.0_scaffold00082.31)
- - - - 1.79 - - - -1.95 - 0.84 - -2.04 -1.66 2.16 - 0.49 - - 2.11 2.28 -0.17
AMTR_s00095p00106600 (evm_27.TU.AmTr_v1.0_scaffold00095.64)
- - - - 3.47 - - - - - - - - - 2.7 - 2.14 - - - - -
AMTR_s00097p00162320 (evm_27.TU.AmTr_v1.0_scaffold00097.52)
- - - - - - - - - - 3.14 - - - - - - - 3.57 - - 0.38
AMTR_s00100p00143400 (evm_27.TU.AmTr_v1.0_scaffold00100.53)
- - - - -4.55 - -2.75 - -3.11 -2.59 -0.04 2.74 -1.12 -0.95 -4.25 - 2.71 - 1.39 -0.62 1.4 -1.38
AMTR_s00100p00143770 (evm_27.TU.AmTr_v1.0_scaffold00100.54)
- - - - 2.69 - - - - 0.08 - - 1.36 -2.18 1.27 - 2.64 - - 0.74 - 0.49
AMTR_s00101p00085590 (evm_27.TU.AmTr_v1.0_scaffold00101.61)
- - - -0.97 1.72 - -2.93 - -3.56 -1.02 1.12 - 1.01 0.24 0.74 - -0.24 1.71 - 1.03 1.55 0.46
AMTR_s00102p00065130 (evm_27.TU.AmTr_v1.0_scaffold00102.30)
- - - - 0.41 - 0.53 - 0.71 0.94 0.58 - 1.29 0.01 0.51 -1.47 0.39 -0.1 -1.08 0.67 1.33 1.08
AMTR_s00104p00118200 (evm_27.TU.AmTr_v1.0_scaffold00104.48)
- - - 1.07 0.66 - -4.01 - -1.17 -2.02 0.3 1.79 -0.04 -0.35 0.8 - 2.27 - -1.38 -1.08 1.81 -2.46
AMTR_s00110p00055190 (evm_27.TU.AmTr_v1.0_scaffold00110.24)
2.93 - - -0.27 0.42 - - - - - - - 2.28 1.12 1.3 - - - - 0.88 - -0.2
AMTR_s00117p00081090 (evm_27.TU.AmTr_v1.0_scaffold00117.23)
2.76 - - - 0.96 - -0.87 - 0.4 -0.36 - - -0.98 0.41 0.88 - 2.2 - - 0.52 - -0.1
AMTR_s00129p00046360 (evm_27.TU.AmTr_v1.0_scaffold00129.21)
- - - - 3.02 - - - - - - - - - - - 3.25 - - 2.12 - -
AMTR_s00135p00090600 (evm_27.TU.AmTr_v1.0_scaffold00135.47)
- - - - 2.33 - 1.27 - - - - - 0.67 - 2.25 - 3.04 - - - - -
AMTR_s00139p00059000 (evm_27.TU.AmTr_v1.0_scaffold00139.9)
- 0.48 - 1.87 -0.99 - -5.24 -1.48 -2.13 -5.01 -1.01 0.76 -0.44 0.32 -0.56 -1.39 1.59 -1.01 0.29 1.18 1.41 -0.14
AMTR_s00144p00105490 (evm_27.TU.AmTr_v1.0_scaffold00144.60)
- - - - 1.32 - - - - - - - 0.42 - 3.09 - 2.98 - - - - 0.8
AMTR_s00145p00058920 (evm_27.TU.AmTr_v1.0_scaffold00145.17)
- - - - 1.7 - - - -3.11 -0.26 2.62 - - -1.72 0.95 - 0.28 - 2.71 0.42 - -1.76
AMTR_s00153p00078550 (evm_27.TU.AmTr_v1.0_scaffold00153.41)
- - - - 0.86 - - - - - -0.07 - - - 2.35 - 2.8 - - 1.13 2.33 -
AMTR_s00161p00053960 (evm_27.TU.AmTr_v1.0_scaffold00161.17)
- - - - 2.31 - -2.55 - - -1.35 - - 1.91 - 1.77 - 1.92 - - -0.24 2.12 -1.5
AMTR_s00162p00027060 (evm_27.TU.AmTr_v1.0_scaffold00162.6)
2.5 - - 0.79 0.79 - -1.14 - -0.15 -1.08 - - 1.4 -1.76 0.86 - 0.12 - - 0.4 1.76 -1.0
AMTR_s00165p00022240 (evm_27.TU.AmTr_v1.0_scaffold00165.6)
- - - -0.61 -0.93 - - - -5.65 - -0.52 - - -1.29 2.59 - 3.46 - - 1.39 - -4.35
AMTR_s00214p00028540 (evm_27.TU.AmTr_v1.0_scaffold00214.4)
- 1.51 - - 1.6 - -3.03 - -1.36 -2.39 - 1.8 0.41 1.03 -0.39 - 1.78 - - -1.06 1.45 0.22
AMTR_s00217p00025020 (evm_27.TU.AmTr_v1.0_scaffold00217.8)
- - - - 0.84 - 1.53 - 1.51 1.48 - - -1.56 -0.79 2.23 - 1.69 - 1.51 - - -
AMTR_s02449p00001860 (evm_27.TU.AmTr_v1.0_scaffold02449.1)
-2.49 -0.03 -1.27 - -0.64 -4.68 -0.76 - -1.02 -1.21 -0.09 0.62 0.13 0.57 0.52 0.53 0.14 0.43 0.82 1.5 -0.26 1.28
- - - -0.99 2.1 - -2.96 - -2.23 -1.22 0.88 - 0.79 0.15 1.64 - 0.58 -16.52 - 1.61 0.72 1.29

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.