Heatmap: Cluster_123 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
-2.48 - -3.49 0.72 -1.46 -4.17 -2.81 -1.0 -1.88 -1.89 -1.14 -2.96 -2.63 -3.03 -1.09 -1.81 -1.89 0.6 3.71 -
- - - - - - - - - 2.1 - - - - - - - - 3.55 1.99
-0.97 - - - - - -2.2 -0.87 -0.37 0.54 -0.08 - -0.95 -0.05 0.59 1.37 0.38 -0.18 2.78 -0.09
0.4 -0.4 - - -0.14 -0.78 0.64 -0.12 0.74 -0.39 0.4 -2.13 -1.08 -1.42 0.73 -0.86 -0.15 -0.28 2.2 -0.69
-3.84 - - 0.68 -0.63 -0.74 - 0.09 -1.3 -0.19 -0.33 -3.41 -4.0 -2.48 -0.02 0.43 0.89 -1.16 3.08 -0.97
- - - - - - -1.17 0.0 0.18 -0.02 1.15 -2.88 -0.14 -1.64 0.32 - -2.39 - 3.46 -1.19
-0.56 -0.8 - 1.52 1.04 -1.0 0.06 -1.93 -1.69 -1.52 -1.25 -3.87 -1.31 -1.29 -1.71 - -2.44 -3.6 2.83 1.27
-0.07 -0.94 -1.87 0.47 0.39 -0.2 0.23 -1.5 -2.1 -1.92 -0.92 -2.91 -1.84 -2.05 -1.53 -1.77 -3.51 -1.58 2.95 1.41
- - - 1.96 - - - -1.36 -3.03 - - - -1.56 - - - - - 3.93 -
- - - - - - - -1.29 -0.67 0.28 -0.53 -2.27 1.33 0.04 -0.68 1.02 0.01 0.33 3.07 -
-1.56 0.44 -2.43 -0.23 -0.38 -1.29 0.36 -0.21 0.07 0.55 0.1 -1.99 -0.5 -0.41 0.14 0.32 -1.74 -0.97 1.35 1.54
-2.85 - -4.87 -2.81 -0.76 0.12 0.6 -0.46 -0.22 0.36 -2.85 -1.23 -4.18 -4.55 -2.95 -0.56 -1.26 0.57 2.15 2.54
0.32 - - 1.68 -1.61 0.22 0.69 -0.04 -0.74 -2.42 -1.63 -1.37 -2.38 -0.77 0.93 -0.33 -0.5 0.24 1.88 -0.11
0.32 - -1.81 0.87 0.49 -1.27 0.63 -0.98 -1.04 -3.45 -3.08 -3.64 -2.46 -1.82 -0.74 -2.51 -1.53 -1.8 1.98 2.63
-1.3 -0.51 -2.53 -0.97 -0.0 -0.15 -1.76 -0.64 -0.77 -0.89 - -2.24 -1.84 - -1.9 0.83 -0.84 1.88 2.9 -
-0.98 -0.28 -2.94 1.59 -1.7 -1.15 1.16 -0.52 -1.31 -1.03 0.51 -2.67 -3.3 -2.47 0.37 1.26 - - 2.3 -1.12
-0.34 -0.45 -2.78 1.55 -2.03 0.46 -1.71 -0.41 -1.16 -0.91 -0.8 -2.71 -0.53 1.05 -2.78 0.48 -1.5 0.41 2.18 -0.95
-2.81 - -3.7 0.67 -20.88 -1.57 -3.24 -1.27 -2.48 -2.71 - -5.52 -3.51 -4.2 -2.78 -1.09 -4.5 -1.99 3.99 -4.73
-0.03 - - 0.02 - - -1.37 0.14 -0.75 - -0.15 -2.05 -0.71 -2.13 -1.87 0.02 -0.18 - 3.43 -0.03
- - - -0.81 - - 1.3 0.09 -0.16 -0.53 1.32 -3.48 -2.88 - 0.9 -2.23 - -2.68 3.08 -0.11
0.58 - - 2.67 -0.04 - -1.18 -1.7 - - - - - - - - - - 3.25 -0.12
0.42 -0.5 -0.15 0.5 -1.22 -0.28 -0.83 0.03 -0.65 0.13 -3.23 -2.62 -0.45 -0.81 -2.65 -2.58 - -0.42 3.07 -
-0.02 -0.44 -2.93 1.68 -1.1 -2.37 -0.97 0.01 -0.61 -0.85 0.04 -4.19 -1.37 -1.77 0.23 0.72 0.08 -1.0 2.26 -0.71
-6.34 - - - - - - -0.14 -1.18 - - - -6.73 - - 1.68 - 1.22 3.65 -0.9
- - - -1.32 - - 2.1 -3.83 -5.28 -3.87 -5.27 - - - - - - - 3.82 -0.08
-0.39 - - - 1.72 - - -1.26 - - 0.54 -1.3 - -1.82 - -0.14 - 0.41 3.01 1.62
-3.17 - - 1.41 0.4 0.09 -1.86 -0.62 -1.15 -1.17 -0.29 -1.28 -1.19 -0.61 -1.83 -2.54 -0.16 0.24 2.56 1.18
-1.09 - - - - - - -0.19 0.23 -1.93 0.4 -4.1 -2.37 -3.52 2.6 -1.42 -0.62 - 3.02 -1.42
- - - 1.46 -0.12 - - -0.4 -0.8 - -0.28 - - -2.64 0.61 0.91 -0.75 - 3.32 -
-0.49 -1.19 -2.55 -1.65 0.74 -2.51 0.67 -0.37 0.44 0.29 0.05 -3.23 -0.25 -0.3 0.46 0.52 -0.05 -3.52 2.2 -1.64
0.32 -1.88 -2.72 0.27 -0.51 -1.73 0.39 -1.08 -2.38 -1.54 -0.34 -2.42 -1.98 -1.46 -0.41 -1.82 -1.53 -2.87 2.97 1.52
- - - - - - - 0.48 -0.02 - - - 1.21 - - 1.83 - - 3.23 1.25
0.17 -1.15 -0.28 0.39 -1.19 -2.08 -1.01 -0.16 -0.15 0.39 1.43 -3.28 -1.54 -1.18 0.62 0.29 -0.35 -2.36 2.17 -2.34
0.7 0.5 -0.67 1.26 0.58 0.41 -2.34 -1.37 -0.42 -0.17 - -2.61 -3.06 -3.17 - 0.82 - - 2.75 -
0.01 -0.43 - 1.7 - - -1.36 0.23 -0.83 -0.85 -0.03 - -1.84 -2.07 0.33 -0.3 -1.48 -1.64 2.91 -0.76
-2.32 -1.22 - 1.39 0.2 -3.08 -1.42 -1.28 -2.16 -1.04 -0.01 -4.04 -3.6 -2.86 -0.3 -0.8 -2.77 -0.15 3.36 -4.7
-1.46 0.04 -0.43 -1.11 -0.73 1.3 -1.25 -0.98 -2.56 -4.04 - -2.93 -3.08 -3.28 -5.01 -1.66 -2.74 1.84 2.49 1.65
- - -0.93 3.18 - - -1.74 -1.2 -1.87 -1.86 -1.94 -3.08 - - 0.83 - -1.02 -1.3 2.6 -
- -0.4 - -0.43 - - -0.01 -0.49 -1.16 - -0.45 - -2.24 -4.1 -0.8 0.93 - - 3.69 -
-0.75 0.44 -0.58 2.24 -1.14 -0.08 -2.0 -0.91 -1.68 -1.13 -0.89 -3.17 -0.96 -3.0 -2.5 1.14 - -1.12 2.43 -2.4
-1.35 - - 2.15 0.03 - -2.16 -0.28 -0.63 -2.17 -0.09 - -3.75 -2.8 0.03 -0.66 0.32 -0.07 2.84 -3.71
-0.1 -0.45 -0.76 0.94 0.05 -1.11 -1.11 -0.22 -0.74 -1.04 -0.17 -2.79 -0.31 -1.02 -0.19 0.64 -0.51 0.26 2.25 -1.03
- 1.17 1.28 0.13 -2.17 -2.85 - -1.97 -3.66 - - - - - - - 0.97 - 3.53 -
-1.14 -1.81 -2.97 - -0.04 - 1.64 -0.47 -0.32 -1.19 -1.03 -2.32 -0.77 -0.34 1.18 0.68 -1.13 - 2.72 -3.06
-0.96 -2.84 -2.77 0.42 0.19 -0.18 -2.07 0.05 -0.69 -1.07 -0.96 -2.09 -1.51 -1.99 0.18 0.7 -0.4 0.22 2.86 -2.45
-1.33 - -1.17 0.39 - -1.12 -2.02 -0.84 -1.0 -2.17 - -1.78 -0.32 -0.37 2.14 1.7 -1.21 -3.33 2.54 -
-1.34 - -1.24 1.7 1.45 -0.91 -1.44 -1.01 -1.76 -1.75 -0.16 -2.45 -3.22 -2.92 -0.4 -1.51 -0.41 0.56 2.71 -
- - - - - - 0.36 -1.15 - - - - 0.72 -3.2 -5.49 2.24 - - 3.56 -
0.2 0.45 -0.08 -0.79 -1.02 -0.14 -0.63 -0.36 0.19 -0.11 -0.87 -1.02 -0.19 -0.56 -2.8 0.09 - -0.48 0.74 2.29
-0.59 -0.64 -1.11 0.22 -0.9 -0.35 0.91 -0.13 0.39 -0.2 -0.54 -2.0 -1.2 -1.18 0.34 0.54 -1.55 -0.41 2.13 -0.38
0.01 -1.8 -2.27 0.82 -1.54 -0.57 -0.19 -1.41 -1.57 -2.17 -1.32 -2.22 -5.97 -4.32 -1.96 -3.53 -2.27 -1.05 3.57 -1.69
-1.05 1.1 - - 1.1 - -0.91 -0.54 -0.27 - 0.92 - 1.02 0.1 -0.14 1.96 - - 1.75 -
0.86 -0.45 -1.11 0.77 1.23 -2.67 - -1.06 -2.01 -1.57 -0.83 -2.82 -2.81 -5.33 -0.0 -0.59 -0.77 -0.16 2.71 0.2
-1.62 - - 0.74 - -2.63 1.31 -0.12 -0.43 -1.19 -1.01 -4.92 -2.03 -1.26 -3.19 0.64 0.87 -1.43 2.87 -0.17
- - - - - - - 0.37 - - - - - -0.51 0.98 - -3.8 - 3.95 -0.88
-1.14 0.19 -2.5 1.89 -1.76 - -2.15 -0.79 -1.46 -1.95 -1.68 -2.64 -1.59 -3.36 -0.57 -1.39 - -0.87 3.31 -1.41
- - - - - - - - - - - - - - - - - - 4.32 -
- - - - 0.22 - -1.54 -0.32 - -1.75 - -1.9 -1.1 -2.44 -1.12 -0.65 - 1.93 3.53 -
-0.55 - 1.53 1.57 - - 0.79 -1.4 - - - -4.1 - - - - - - 3.5 -
-0.56 - - - - - -1.6 -1.56 -1.61 -1.66 -1.01 -1.96 - - -1.07 1.52 0.33 - 3.66 -
-0.86 -0.01 -0.97 0.8 -0.79 -1.42 0.72 -0.48 -0.04 -0.01 0.29 -2.18 -0.16 -0.12 -0.01 0.03 -2.61 -0.46 2.11 -1.19
-1.77 -0.68 - 0.71 -1.31 -2.82 - -2.44 -5.02 -2.76 -2.57 -5.61 - - -1.59 -2.89 -2.94 -2.83 3.93 -1.39
- 0.97 - 1.3 - -2.99 - -2.08 -1.86 -2.49 -4.42 - -6.16 -2.24 -1.39 - - - 3.82 -
-1.44 - -1.44 -0.16 -2.05 - -1.13 0.34 1.07 1.57 0.23 - -1.55 -0.95 1.37 -1.76 - 0.06 2.32 -1.34
-0.65 - - - - -0.52 - -0.32 -0.81 - 0.18 - - - 1.38 -0.43 0.8 0.41 3.28 -
0.33 - - 0.82 -1.47 - -3.17 0.02 -0.22 -0.21 -0.87 - 0.24 0.54 0.39 1.04 -0.12 -2.52 2.5 -1.13
-8.42 -4.88 - -0.98 - - -4.45 0.59 -18.02 -0.95 -26.7 - 1.33 1.31 -10.92 - -29.5 - 3.09 1.96
-0.51 -1.37 -2.26 0.75 -1.98 -2.35 -1.36 -0.74 -1.58 -2.02 -2.32 -4.54 -0.3 -1.04 -0.93 -1.73 -1.55 -2.68 3.5 -0.23
0.16 - - - 0.74 - - 0.19 -0.84 -6.76 - - - - - 2.61 - - 3.24 -
- - - - - - 0.22 -3.81 - - - - - - - - - 0.22 3.38 2.84
-0.87 -0.23 -0.39 -0.73 0.21 0.29 -1.24 -0.22 -0.53 -0.52 -0.49 -0.66 -1.43 -1.39 -0.21 -0.12 -0.64 1.5 1.44 1.08
0.93 - -0.57 1.19 - - -1.32 -0.36 -1.41 -0.54 -0.81 - - -1.69 0.1 1.86 0.78 - 2.48 -
1.51 - -1.35 0.21 - 0.08 -2.23 -0.22 -1.23 -1.33 -0.58 - 0.6 -0.17 -0.67 -0.34 0.53 -0.05 1.91 1.01
1.35 -0.23 0.63 1.76 0.72 -0.12 -2.3 -1.89 -3.1 - - - -2.87 - -1.61 - - -1.71 2.95 -
0.58 -0.15 -0.07 0.39 -0.79 -1.07 -1.02 -0.05 -0.59 -0.51 -0.35 -2.77 -0.74 -1.3 -0.09 0.85 -1.06 0.27 2.28 -2.15
-0.64 - -1.18 1.18 -0.7 -0.77 -1.26 -0.93 -2.39 -2.69 -0.91 -3.83 -1.7 -2.0 0.03 -2.68 -2.27 -3.58 3.25 1.01
- - - - - - - - - - 1.37 - - - - - - - 4.12 -
-0.56 -1.1 -3.01 1.69 -0.16 -1.18 -1.82 -0.62 -1.49 -0.6 -0.53 -3.75 -3.26 -1.55 -3.23 -0.06 -1.52 -0.5 3.11 -2.12
- - - 2.54 - -1.61 -2.23 -0.6 - -3.17 - - 1.84 1.79 - - - - 2.54 -
-0.47 0.68 -0.18 1.19 0.89 -0.31 -2.47 -1.16 -3.89 -4.63 -3.99 -5.15 -5.96 -5.74 -2.93 -2.71 -3.14 1.6 2.19 1.58
- - - 2.41 0.03 0.51 - -1.08 - - - - - -2.1 - -0.05 - - 3.4 -
-0.42 -0.69 -2.15 1.26 0.2 -0.75 0.0 -1.06 -1.69 -1.17 -1.17 -5.42 -3.6 -1.71 -1.2 -1.44 -3.81 -2.17 2.8 1.65

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.