Heatmap: Cluster_84 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
- - - - - - - 4.32 - - - - - - - - - - - -
2.26 0.51 0.06 1.66 0.7 -0.69 -1.35 -0.18 -6.14 -3.74 -0.95 -4.02 0.24 -0.53 -0.19 - - 0.38 -1.14 -0.18
-0.52 - - 3.45 0.19 -0.89 - -1.7 -1.72 -1.11 -0.65 -1.24 -1.52 -1.36 -0.58 - 0.2 0.31 -1.86 -0.96
-0.08 -0.5 0.06 -0.21 0.27 0.08 -0.12 0.2 -0.37 -0.38 0.23 -0.37 -0.3 -0.62 0.41 -0.51 -0.2 0.42 0.3 0.75
- - 1.15 3.19 - - 1.74 0.29 - - - -1.42 - - -0.49 0.28 0.17 - -0.59 -
-1.25 - -2.67 2.1 0.73 0.53 -3.92 0.35 -2.97 -2.5 -0.43 -6.39 1.01 1.01 0.34 - - 0.84 -16.2 1.36
- - - - - - - -6.89 - - 3.98 - - - 2.06 - - - - -
0.79 -0.24 -0.15 1.37 -0.33 -0.09 -1.5 0.1 -0.62 -0.38 0.09 -0.49 0.47 0.59 0.11 -0.69 -0.25 -0.11 -4.32 0.22
0.04 0.1 -0.58 2.02 0.0 0.23 - 0.31 -3.47 -4.14 -0.32 - 0.84 0.66 0.03 -24.76 -21.12 0.34 1.66 -11.04
0.65 -0.71 -0.81 0.18 -0.12 0.14 -0.75 0.06 -0.44 -0.9 0.82 -1.53 0.73 0.53 1.15 -1.18 -1.65 0.72 -0.49 -0.62
0.47 - - 3.21 -26.97 -19.56 -27.05 1.08 -4.02 -5.95 - - 1.75 1.12 -1.36 -5.21 - - - 0.3
-3.2 -1.43 -5.49 - -6.24 -1.6 -2.54 1.28 -1.63 -0.11 0.66 -1.21 2.3 2.33 0.67 - -0.97 -0.61 -0.8 -
-3.3 - -11.35 - - - - 1.52 -1.1 -5.13 0.4 -26.74 2.96 2.79 -0.88 - - - -7.84 -
0.46 - 2.82 0.55 - - -0.18 -1.82 0.21 - 1.59 -0.5 -1.32 - 1.24 - - - -1.1 -0.32
- - 2.42 - - - -0.43 -2.27 0.23 - 2.71 0.45 - - 1.64 - - - -1.27 0.1
-0.93 -0.22 -0.67 0.14 0.19 -0.31 0.09 0.37 -0.78 -0.65 0.63 0.03 0.56 0.51 0.67 -0.99 -0.55 0.12 0.21 -0.18
1.71 - -3.08 0.52 1.59 -21.46 -0.76 -0.35 -0.37 -0.66 1.33 -0.5 0.62 1.03 0.83 - -5.05 - -4.59 -0.43
- - - 2.48 - - - 1.1 1.72 1.74 - - -1.76 - - - - - 2.42 -
- - - 3.02 -3.21 - -2.36 -1.51 - -1.62 0.69 -0.37 -1.81 -1.86 -9.4 1.39 -1.33 -8.73 0.65 1.75
-0.15 0.7 -0.61 0.45 0.1 0.26 -2.61 0.56 0.41 0.48 0.58 -1.12 0.51 0.08 0.68 -0.37 -1.77 0.32 -4.23 -1.24
1.3 0.43 0.76 0.01 0.93 -0.37 -0.75 -0.2 -3.29 -3.45 0.6 -2.04 0.2 -0.22 0.73 -1.9 -2.09 0.65 -0.21 -0.34
0.28 -0.51 0.26 -0.81 -0.35 -0.2 0.02 0.13 -0.99 -1.07 0.35 -1.03 -1.36 -1.62 0.12 -0.3 0.4 0.67 1.4 0.72
0.93 -22.49 -0.09 0.72 0.17 -4.76 -1.14 0.37 -0.44 -1.47 1.13 -0.02 0.9 0.79 1.06 -0.38 -1.76 0.37 -2.63 -2.81
-32.75 - - - - - -12.86 0.93 -0.78 -0.65 -0.39 1.29 - - - 1.1 1.13 - 3.22 -
0.41 -2.25 -0.14 2.25 0.48 -0.1 -0.81 0.15 -2.69 -2.92 0.41 -0.61 0.9 0.64 0.3 -2.57 - -0.39 -2.28 -0.45
1.91 - - 0.78 - - 0.69 0.76 0.71 0.12 1.76 -3.88 -4.51 -0.33 0.39 - 1.01 - -0.15 -19.33
0.88 - -24.21 - - - - 1.25 -1.76 -2.52 0.96 - 1.2 -0.52 2.45 -3.34 -0.64 1.08 -0.1 0.16
-0.01 0.03 0.19 1.39 -1.54 -0.25 0.03 -0.49 -0.27 -0.24 -0.6 -3.46 -3.3 -4.63 -0.2 -2.43 -0.81 -1.71 2.66 -1.0
0.5 -2.44 -1.95 0.07 0.34 -0.29 0.47 -0.16 -0.31 -0.25 0.5 -0.74 0.25 0.24 0.48 -0.35 -0.12 0.43 -0.01 0.33
0.63 -0.39 -0.01 -0.7 0.37 0.46 0.38 -0.28 -0.3 -0.55 -0.06 -0.92 -0.09 -0.17 -0.08 -0.21 -0.59 0.63 0.22 0.37
0.82 -0.52 -0.6 1.06 0.32 0.28 0.66 0.4 -1.62 -1.98 0.25 -2.56 0.09 -0.15 0.47 -3.93 -2.84 0.07 0.67 0.37
-2.46 - - 1.85 -14.05 - - 0.44 -0.84 0.63 1.1 -17.69 1.59 1.7 0.7 - - -3.07 -0.27 0.83
0.21 -1.07 -0.13 0.4 -0.36 -1.43 0.42 0.04 -0.07 -0.49 0.28 -0.93 -0.03 0.34 0.34 0.75 0.14 -0.03 -0.44 0.27
0.33 -0.46 0.04 0.88 0.55 0.42 0.38 0.08 -1.81 -1.39 -0.03 -1.17 -0.13 -0.73 -0.01 -1.17 -0.8 0.39 0.59 0.63
0.7 - -0.15 -2.54 -0.01 - -1.1 0.87 0.45 0.79 1.66 -2.17 0.31 -0.7 1.51 -1.02 -0.12 -1.44 -1.12 -0.77
- - - - - - - 2.15 - - 0.4 - - - 3.83 - - - - -
-0.12 - 2.41 0.48 1.68 -1.55 -1.48 -1.92 -0.74 -0.54 -0.88 -3.59 -1.8 -4.42 -0.92 0.37 -17.11 1.79 -22.09 -0.55
-0.49 -23.6 - - -3.37 - -24.96 1.79 -24.95 -21.83 2.34 - 2.05 -0.18 -0.25 - - -1.61 -1.77 2.07
-0.65 0.35 0.5 - -0.08 - 0.4 -0.58 0.35 0.38 -0.21 -3.53 0.45 0.72 -0.77 1.39 -0.85 -1.08 1.36 -1.3
-3.07 - - 2.33 -27.02 - -4.89 0.21 -2.1 -2.72 1.31 - 2.45 2.25 -0.74 - - - - -
1.1 -0.34 0.72 1.52 0.64 0.18 -0.45 -0.03 -1.72 -1.97 -0.2 -1.96 -0.49 -0.57 -0.43 -1.65 -0.75 0.33 0.48 -0.36
- - - - - - - 2.18 - 1.52 2.02 - - - 2.59 - - - 1.32 -
0.63 - -31.82 1.49 0.28 -2.27 -0.21 0.04 -0.56 -0.74 -0.31 -3.02 1.83 1.47 0.1 -0.09 -1.31 -0.95 -5.59 -0.24
1.21 1.2 0.39 1.53 0.38 1.15 -1.95 -0.12 -1.1 -1.51 -0.42 -2.91 -0.09 0.08 -0.39 -2.56 -0.86 -0.26 -1.55 -2.77
- - - -4.89 - -29.91 - 1.47 - - 3.12 - - - 3.02 - - -28.07 -12.22 -1.27
-2.85 - - 1.22 -20.74 - -4.35 1.59 -1.97 -2.59 0.31 0.12 2.45 2.44 -1.75 -27.27 -7.34 -3.12 -1.42 -5.64
-0.73 0.11 -0.94 -1.85 -0.27 -1.19 0.19 -0.17 -0.41 -0.19 1.51 -0.06 0.05 -0.43 1.35 0.12 -0.58 -1.64 0.77 -0.53
- - - - -2.2 - - 0.65 -1.82 -0.57 2.92 - 1.33 2.03 1.54 - -2.27 - - -
1.17 -0.62 0.07 -0.08 1.01 -1.56 -1.57 0.3 -0.79 -1.16 -0.25 -1.57 0.8 0.98 -0.38 -0.35 0.17 -0.39 0.6 -1.72
0.35 0.17 -0.44 0.66 0.18 -0.62 0.06 0.24 -0.83 -0.64 0.27 -1.35 1.08 0.58 0.32 -2.23 -2.84 -0.32 0.55 -0.04
-0.44 -12.81 -0.24 0.96 -0.68 -13.63 -0.95 0.39 -1.79 -1.1 1.18 -1.96 1.91 1.74 1.28 - - -0.19 -2.09 -3.3
1.92 -31.8 -18.31 0.64 -0.61 -0.7 -0.12 0.66 -1.53 -2.82 -0.31 - 2.01 1.79 0.15 - - -8.27 - -0.03
0.55 0.44 0.14 0.37 0.2 -0.36 -1.44 0.08 -0.53 -0.55 0.19 -1.17 0.36 -0.03 0.76 -1.12 -0.3 -0.03 -0.71 0.72
0.63 0.96 1.25 0.99 0.15 -0.31 0.28 -0.26 -1.44 -1.68 0.33 -2.37 0.23 0.27 0.57 -3.06 -1.18 -0.85 -1.32 -0.6
-0.33 -2.28 -1.39 -0.44 0.28 -0.26 0.58 0.21 -0.78 -0.61 0.54 -0.45 0.54 0.42 0.69 -0.45 -0.46 0.25 0.46 0.41
-0.58 0.12 -1.28 1.21 0.25 0.61 -0.28 0.49 -0.97 -0.91 0.4 -1.75 0.05 -0.44 0.79 -3.8 -3.26 0.54 0.63 0.3
-0.15 0.52 -0.14 -0.2 0.8 0.57 -1.03 0.1 -0.91 -1.04 0.42 -0.62 -1.68 -1.87 0.55 -0.67 -0.22 0.49 0.74 0.56
0.72 -1.47 0.03 0.96 0.28 -3.38 -0.07 0.38 -0.36 -0.02 0.89 -1.58 -0.62 -0.36 1.09 0.14 -0.24 -1.14 -0.28 -0.47
- - - - - - - - - - - - - - - - - - - -
-0.13 -0.81 -0.1 - -0.39 -2.59 -1.32 -0.16 -0.61 -1.48 2.0 -1.98 0.43 1.3 1.98 -1.22 -1.17 -4.22 -1.54 0.08
-0.41 - - - 1.57 2.57 0.21 1.12 -1.0 - 0.63 -0.53 -0.44 -0.7 0.78 - -1.07 - -1.67 -1.24
0.13 -0.09 0.04 0.39 0.21 -0.49 -0.86 0.15 -0.21 -0.76 0.8 -0.79 0.54 0.19 0.63 -0.67 -0.64 0.04 0.16 -0.37
0.74 -0.03 0.39 -0.27 0.82 -1.12 -0.11 0.18 0.03 -0.24 -0.06 -0.39 0.11 -0.26 -0.15 -1.96 -1.24 0.92 0.11 -0.18
-0.93 -0.78 -1.03 -1.41 0.29 0.12 -0.09 0.57 -0.24 -0.6 1.25 -1.49 0.52 -0.31 1.7 -0.04 -0.41 -1.28 -0.99 -0.13
1.7 - - - -9.09 - 0.15 -0.16 -0.64 -0.52 2.12 -18.42 -32.14 -1.71 2.3 0.25 - - -4.99 1.39
-0.23 -1.6 -2.34 0.92 0.45 0.27 -0.29 0.41 -2.22 -1.94 1.01 -2.73 0.32 -0.36 1.18 -2.35 -17.58 -0.22 0.96 1.06
- 0.65 - 3.19 -0.36 -0.32 - 0.21 - 0.67 -0.62 - - 0.06 - 0.77 -0.4 -0.68 -2.14 -
0.26 -0.63 - 1.91 -0.17 -0.76 -2.4 -0.91 -1.76 -1.62 -0.12 -1.36 -0.96 -3.18 -0.62 - -0.29 0.04 2.84 -
1.39 - -1.85 -1.02 0.36 -1.13 -1.14 0.42 0.13 -0.15 0.77 -3.0 0.99 0.51 1.21 -0.55 -0.08 0.08 -4.42 -0.31
0.47 -0.42 0.21 0.71 0.02 -1.11 -0.98 -0.05 -0.99 -0.72 0.86 -0.58 0.37 0.4 0.48 -0.35 -0.24 -0.49 0.5 -0.36
0.08 -0.2 -0.04 0.52 0.35 -0.24 -0.75 0.27 -0.38 -0.49 -0.12 -0.59 0.3 0.34 -0.16 -0.29 -0.76 1.12 -0.4 -0.09
0.51 - -0.46 2.17 -0.37 - 1.2 -0.93 -1.73 - -1.63 -1.8 -0.2 -0.98 1.11 0.98 -1.42 -0.63 1.2 -
0.68 0.61 0.84 -0.03 -0.55 -0.86 -1.69 1.08 -1.51 -1.76 0.63 -0.66 0.87 0.56 0.68 -2.84 0.68 -0.54 -4.27 -2.03
0.75 - -16.85 - 1.85 0.96 -0.75 0.72 -1.03 -1.23 0.51 -4.06 -0.24 -0.1 0.32 0.13 -3.49 0.53 - 1.3
0.26 -1.61 -1.04 -1.13 -0.08 -3.26 -0.01 0.18 -0.17 -0.75 0.76 -0.6 1.04 0.56 1.01 -0.1 -0.01 0.66 -1.96 0.27
-1.28 - - 2.69 -0.61 - -1.06 0.55 - - 1.46 - 0.48 1.91 1.07 - - - -0.89 -
-1.63 0.75 -0.22 1.03 -2.38 - 0.46 1.42 - -5.04 0.71 - 0.7 0.44 1.01 - -2.16 -2.81 -2.43 1.87
0.18 0.64 0.18 1.46 -0.66 -1.28 -1.17 -0.04 -0.65 -0.35 1.03 -2.37 0.98 0.42 0.64 -2.16 -1.34 -0.54 0.16 -
0.42 -0.13 -0.45 -0.14 0.5 -0.35 -1.0 0.21 0.37 0.42 0.69 -0.87 0.85 0.15 0.5 -0.28 -1.32 0.27 -1.14 -2.0
-20.19 - - -0.76 -19.55 - -2.83 0.17 - -27.39 2.61 - 1.97 1.66 2.27 - - -5.13 -3.42 -
- - - 2.76 - - - 0.19 - - 1.23 - 2.12 1.54 1.24 - - - -2.95 -
- - - - - - - - - 4.32 - - - - - - - - - -
1.12 - -27.83 - 1.11 -1.73 -0.0 0.51 -0.77 -0.92 0.81 0.24 0.91 0.65 0.7 -0.83 -1.93 0.79 -1.69 -0.05
-0.37 - 0.35 1.32 -1.23 - -2.24 -0.89 0.19 0.13 0.12 - -0.74 0.5 -0.59 1.64 -1.27 -1.55 1.87 -0.38
0.42 -3.02 -0.19 0.03 0.44 -1.09 -0.16 0.42 -0.19 -0.29 0.39 -1.92 0.11 -0.02 0.57 -0.1 0.02 0.38 -0.4 0.82
2.1 -33.12 -2.1 0.43 1.13 -1.29 0.38 0.63 -2.78 -2.17 0.31 -0.83 0.27 -0.02 0.39 -5.94 -3.81 0.44 -4.95 0.64
0.02 -0.42 -0.22 -0.2 -0.34 -0.47 -0.65 -0.03 -0.22 -0.1 0.97 -0.72 -0.3 -0.13 0.95 -0.29 -0.25 0.36 -0.27 0.67
-0.64 -3.78 -3.14 -0.54 0.07 -0.45 1.52 -0.47 -0.48 -0.29 0.7 -0.56 0.4 0.17 0.68 -0.79 -0.18 0.3 -0.03 0.64
- - - - - -0.42 - 1.19 - 0.53 0.25 -1.76 2.81 1.52 - - - 0.83 -0.91 0.9
0.45 0.35 -0.54 -0.33 0.56 -0.6 -0.9 0.22 0.15 -0.22 0.41 -0.85 0.87 0.57 0.56 -0.8 -0.37 -0.02 -1.85 -0.34
0.75 -5.78 -8.33 0.51 1.38 -2.56 -0.39 0.17 -0.83 -1.2 0.84 -2.91 0.82 0.71 0.68 -10.33 -0.26 0.64 -3.83 0.89
0.86 -0.97 -0.18 0.67 0.37 -0.2 -0.31 0.01 -0.25 -0.35 0.88 -0.94 -0.11 -0.63 0.67 0.14 0.05 -0.61 -0.84 -0.46
- - - 2.79 - -1.45 -2.63 -0.42 -2.58 -0.34 -0.32 -3.81 - - -0.44 -1.57 -1.75 -1.91 3.06 -
0.07 -5.54 -1.61 0.31 1.18 -1.1 -1.13 0.07 -0.9 -1.25 0.51 -0.74 0.67 0.46 0.9 0.09 0.25 0.61 -3.89 0.56
0.25 - - 1.51 -28.19 - 0.24 0.74 -1.27 -2.85 1.73 -22.59 1.62 1.36 1.58 -27.71 - -8.82 -16.63 -0.72
0.86 -0.02 0.57 1.91 0.67 -0.71 -1.94 0.01 -1.41 -2.04 0.06 -2.79 0.99 0.87 0.22 -37.12 -8.39 0.11 -3.94 -0.85
-0.03 -1.39 - 1.36 - -10.26 - -0.08 - -0.73 2.32 - -1.31 1.79 2.33 - - -1.96 - -1.31
0.06 -1.71 0.33 0.83 -0.83 - -0.13 -0.28 -1.17 -1.69 -0.12 -3.75 -0.27 -1.19 1.37 1.22 0.44 -0.7 1.2 0.15
0.39 -0.6 -0.4 0.67 0.32 0.42 -0.25 -0.17 -0.71 -0.73 0.17 -0.76 0.17 0.62 0.39 -0.77 -0.6 0.06 0.46 -0.3
0.89 - -1.53 0.86 1.0 -1.65 -0.72 0.01 -0.36 -0.59 0.55 -3.96 1.08 0.86 1.0 0.07 -0.44 -1.89 - 0.11
0.32 -1.59 -0.63 -0.0 0.46 -0.35 0.04 0.04 0.07 0.06 0.89 -0.76 0.47 0.09 0.52 -0.15 -0.51 -0.24 0.11 -0.72
0.76 -1.22 -0.29 -0.29 0.26 -0.28 0.22 0.12 -0.08 0.05 0.67 -0.66 -0.09 -0.52 0.18 0.31 -0.51 0.14 0.18 -0.31
0.28 -0.37 -0.16 0.08 0.25 0.02 0.07 0.05 -0.24 -0.29 0.89 -0.66 -1.12 -1.29 0.76 -0.09 -0.71 0.2 0.67 -0.39
- - - - - - -1.66 0.58 - 0.98 2.92 - -2.63 2.0 -7.22 1.36 - - -0.93 0.47
1.73 - - - - - - -0.65 1.05 - - - - - - - 2.85 - 2.75 -
0.19 -0.99 -0.25 0.95 0.36 -2.3 -1.61 0.0 -0.16 -0.31 0.59 -0.33 0.45 0.65 0.33 -0.3 -0.39 0.32 0.0 -0.39
0.57 0.19 -0.88 -0.55 0.87 -0.4 -0.24 0.46 -1.31 -1.55 0.35 -0.78 1.07 0.91 0.16 -0.99 -0.84 0.43 -6.71 0.28

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.