Heatmap: Cluster_51 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
- - - 0.78 - 1.88 2.61 -1.94 - - - - - - - 1.26 0.67 - -0.41 1.8
-6.65 -4.5 -5.66 - - - 4.18 -4.69 - - -4.13 -4.78 -2.54 0.57 - - - -5.71 - -
-1.82 -1.04 -0.76 -3.08 -0.35 2.71 -2.7 -1.38 -7.53 - - -5.25 -9.19 -3.95 -4.8 -1.19 -1.11 1.65 1.55 1.83
-0.19 0.52 -0.34 -23.37 -0.06 0.44 -1.65 0.62 -0.64 -0.91 -2.88 -1.38 -3.87 -4.0 0.99 -1.09 0.85 0.69 1.86 0.5
0.18 -0.8 -0.3 0.38 -0.32 3.39 1.57 -1.65 -3.24 - - - -2.25 -4.31 - - - -2.57 -0.29 -1.92
0.45 -1.25 -2.23 -0.5 0.51 2.68 1.77 -0.04 -1.59 -3.64 -2.15 -1.47 -3.4 -4.87 0.0 - -2.12 -0.4 0.13 -0.24
1.37 -0.07 -1.24 - - 0.1 -2.04 -2.37 -2.81 - -0.3 - - -2.74 0.16 -0.95 -1.12 1.39 -1.17 3.04
- - - - - - 3.14 - - - - - - - - - - - -4.5 3.47
- - - - - - 3.39 - - - - - - - - - - - 2.16 2.33
0.57 - - - - - 4.18 -1.46 - - - - - - - - - - - -
1.94 -2.26 -2.43 1.09 -2.3 -3.09 1.5 -2.41 - - - - - - - - - -1.01 -4.92 3.29
- - - - - - 4.09 -2.72 - - - -2.03 -1.4 - -0.31 - - - 0.45 -
0.16 -0.22 -0.33 1.33 - - 0.85 -0.04 -0.41 -0.06 -2.06 -2.32 0.5 0.23 -0.31 0.74 0.84 0.48 0.31 -1.64
-1.47 0.63 0.88 - -0.44 1.53 3.07 -1.22 -3.39 -0.29 - - -2.87 -2.93 -0.74 -0.25 - -0.08 -1.98 -
- - - - - -2.02 3.78 -4.05 -5.29 -4.03 -1.02 -1.02 -4.46 -6.31 -0.25 -2.83 -2.07 -3.16 -0.39 1.44
- - - - - -3.66 4.32 - - - - - - - - - - - - -
-1.4 -1.82 -2.43 0.38 -0.95 3.18 1.67 -1.04 -1.05 -0.96 -1.81 -0.5 -0.84 -1.08 -1.6 -1.25 -0.41 - - -4.22
-1.68 -3.65 -3.24 -0.01 -0.75 3.54 1.09 -1.36 -1.32 -1.39 -3.86 -1.38 -1.5 -2.14 -2.14 -2.22 -0.44 -3.31 -0.95 -2.45
-0.91 0.16 -2.12 -2.76 -1.56 -1.59 2.26 -2.35 -2.7 -1.81 -2.21 -4.42 -1.66 -2.95 -4.55 - - 0.62 0.98 2.93
1.02 -0.2 -0.44 -0.79 1.01 -1.29 1.66 -0.33 -0.52 -0.67 -2.06 -2.67 -1.19 -0.94 -0.68 0.54 -0.31 0.54 0.88 -0.82
-1.99 - - -0.55 -0.07 0.4 0.72 -1.26 -2.4 -2.72 -2.73 -1.07 -0.95 -2.07 -2.98 -0.89 0.38 0.37 -4.36 3.28
-3.7 - -5.65 - - - 4.31 -10.76 - - - - - - - - - - - -
- - - - - - 4.32 - - - - - - - - - - - - -
-0.01 -0.89 - - - 1.79 -1.9 -5.32 -2.67 - - -1.37 - - - - - -2.1 -3.64 3.79
- 0.39 - - - - 4.16 -5.82 - - - -3.72 - - - - -1.28 - - -1.86
-4.05 -4.24 -3.36 -3.91 -2.78 2.18 2.67 -0.89 -2.33 -2.13 -2.61 -1.86 -2.5 -2.45 -2.86 -3.11 -1.46 -0.83 0.77 2.01
-1.62 - - - 1.1 - 3.25 -1.72 -0.79 - 0.28 - -2.04 - 0.26 - - 1.49 0.23 -0.91
-1.54 - - - -2.39 -0.25 3.05 -0.53 -0.38 -1.36 -0.26 -2.42 - - -0.72 -1.04 0.6 2.04 - -0.38
-0.13 0.64 0.4 0.33 -0.57 1.28 1.83 -0.86 -1.95 -1.95 0.1 -1.69 -2.07 -1.12 -0.37 -2.24 -0.51 -1.22 0.68 0.52
-0.09 0.36 -0.03 0.19 -0.24 1.48 1.13 -0.43 -1.11 -0.74 -0.62 -1.06 -1.32 -0.89 -0.01 -1.08 -0.35 -0.59 0.5 0.7
- - - - - 2.65 - -0.06 2.48 - - - - - - - - - 1.44 2.16
-4.51 0.46 -1.62 -1.59 - - 3.38 -3.09 -2.47 - -2.39 -0.57 -4.46 -3.96 -2.01 -1.44 -1.14 -1.63 -0.39 2.03
- - - - - - 2.09 -0.76 -1.5 -0.2 1.52 0.71 -1.12 -1.32 1.23 - -0.93 -1.47 0.54 1.95
0.52 1.78 0.51 0.84 0.62 1.62 0.79 -1.4 -2.31 -1.7 -1.78 -1.36 -3.14 -2.93 -1.81 -1.72 -1.78 -0.64 -0.51 0.63
-3.64 -1.52 -2.56 -3.56 - - 4.27 -10.65 - - - - - - - - - - - -
-1.15 -0.83 -1.48 0.97 1.27 1.22 2.29 -1.58 -5.21 -5.93 -6.81 -0.67 -6.61 -3.23 -4.79 -2.03 -2.08 1.14 0.8 0.53
- - - - - - - - - - - - - - - - - - - -
-0.58 -0.86 -0.2 0.32 -0.08 1.83 1.86 -1.31 -3.09 -3.3 -3.58 -4.46 -4.46 -5.1 -2.05 -3.18 -1.22 0.83 0.13 2.02
-0.59 - - 0.11 -0.5 3.52 -0.31 -1.48 -2.19 -2.45 0.68 -1.52 -0.81 -1.4 0.27 - -1.48 - - -
- - - - - - 4.09 - - - - - - - - - - - - 1.56
- - - - - - 4.32 - - - - - - - - - - - - -
- - - - -4.44 - -5.23 -5.21 - -5.34 - -6.32 -4.9 -5.93 - -3.03 - - -5.95 4.3
1.96 1.92 0.66 2.77 0.74 - 0.41 -1.41 -5.33 - -3.7 -4.61 - - - - -4.52 -1.58 -6.25 -
- - - - -2.38 1.9 2.59 -1.2 -4.06 -2.72 0.55 -1.21 -0.49 -0.5 -0.37 -2.19 -1.98 - - 2.28
1.79 -0.24 -2.99 1.52 0.57 -2.65 0.62 -0.17 0.54 -0.81 -0.71 -2.33 -0.52 -0.63 -0.89 -1.48 -0.22 -0.59 -0.59 0.44
-0.67 - - - -0.87 - 3.56 -0.49 -0.74 -0.17 - -1.86 -0.75 - - 1.3 0.13 - - -1.3
1.35 - -1.1 -0.92 -2.26 - 3.7 -1.4 -1.72 - - - -3.65 -3.76 -2.44 - -2.14 -0.4 -1.66 -0.1
0.22 - -0.26 -0.67 - -1.33 3.94 -3.14 -2.74 -1.87 - - -4.01 - -1.75 - - - -0.65 -2.93
- - - - - - 2.16 -0.54 - - - 0.04 - - - - - - - 3.79
- - - - - 2.68 3.76 -3.52 - - - - - - - - - - - -
- - - 0.11 - 0.67 3.65 -5.43 - - - - - - - - - 2.24 - -
2.14 -1.97 -2.14 -2.83 1.26 -7.4 -1.85 -1.52 -5.06 -4.19 - -0.29 -8.92 -9.14 - - - -0.74 -0.05 3.25
-4.41 -4.83 -4.5 -0.52 0.49 2.68 1.4 -2.18 -3.17 -3.79 -4.28 -4.28 -5.06 -3.31 -4.09 -0.98 -0.29 1.65 0.46 1.12
0.53 - - 3.2 - - - - - - - - - - - - - - - 3.23
1.42 1.23 2.04 0.64 0.58 -1.04 1.13 -3.34 - - - - -4.72 - - - -3.83 0.49 1.56 -0.82
1.42 1.23 2.04 0.64 0.58 -1.04 1.13 -3.34 - - - - -4.72 - - - -3.83 0.49 1.56 -0.82
1.41 - 0.2 - - - 4.02 - - - - - - - - - - - - -
- - - - - - 4.32 - - - - - - - - - - - - -
- - - - - - 4.32 - - - - - - - - - - - - -
-3.46 - - -1.38 -2.92 -0.85 2.27 1.45 -1.44 -1.53 -4.22 -4.37 - -1.44 -3.31 -0.78 -1.6 2.45 1.77 -2.35
- - - - - - 3.54 -2.12 - 0.51 1.3 - - - - - - - - 2.08
- - - - -4.79 -0.33 2.56 -1.69 -4.22 -3.86 -1.29 -1.22 -0.82 0.78 -0.98 -3.28 -2.29 1.79 -2.53 2.4
-3.65 - - -1.36 -2.91 - 3.18 -0.65 -4.37 -4.46 - -2.39 - -6.05 - 0.78 -2.95 - - 2.92
-0.63 0.35 - - -2.05 0.26 3.52 -0.36 - - - - - - -3.33 - -2.64 -2.32 1.66 -0.41
- - - - - 3.65 2.89 -7.24 - - - - - - - - - - - -
-1.94 - - 0.04 -1.67 - 2.93 -1.78 -2.46 -2.78 - - 1.42 0.76 -1.16 - -22.48 -2.12 - 2.35
- - - - - -0.5 3.88 - - - - - - - - - - 1.58 - 0.7
-2.74 -2.96 -1.47 - -1.68 -3.79 0.48 -0.41 0.76 0.94 2.22 -1.1 -2.09 -2.95 1.4 1.18 1.24 -2.3 -2.28 -4.42
0.94 - -1.83 -0.81 -3.51 3.83 1.05 -6.06 - - - - - - - - - -0.86 -1.99 -
0.55 -1.59 -0.01 0.76 0.58 0.88 -0.65 -0.07 -1.1 -1.12 -0.7 -0.05 -0.76 -0.78 -0.62 -1.31 -0.06 1.04 0.77 0.2
0.46 - 0.07 3.71 1.74 - - -2.05 - - - - - - - - - -0.15 -4.2 -
1.55 - -1.02 0.53 - - 3.76 -3.33 - - - - - - - - - - - 0.57
-1.74 -0.05 -2.29 0.42 1.11 0.87 0.32 -1.43 -7.34 -6.4 -7.85 -2.51 -9.45 -6.06 -6.38 -1.99 -3.03 1.81 1.98 1.83
- - - 3.27 -18.12 - - -3.18 -4.87 -3.75 - -5.62 - - - - - 0.65 2.98 -0.68
-2.54 -3.31 -3.9 -1.64 -2.6 0.81 -1.42 -0.81 -7.89 - - -5.5 - -8.83 - -0.82 -2.41 1.97 1.58 3.13
-1.68 -0.93 -2.18 0.15 1.05 1.25 1.17 -1.16 -3.41 -2.58 -1.6 -1.38 -3.79 -2.64 -1.42 -1.24 -1.5 1.36 1.78 1.22
0.83 1.78 0.25 1.43 0.72 -1.47 -0.75 -0.4 -1.6 -1.77 -0.58 0.32 -0.73 -1.04 -0.02 -1.09 -0.0 0.55 -8.01 -8.93
0.38 -0.42 -0.4 0.73 -0.43 -0.02 2.28 -2.82 -4.79 -4.25 -7.65 -5.77 -7.73 -4.32 -5.2 -3.33 -2.55 1.09 1.77 1.49
-3.37 - - - -1.25 -2.08 2.46 0.09 0.39 -0.21 0.86 -0.54 -1.42 -2.2 0.35 1.43 1.75 -3.45 -6.39 -
- - - - - - 4.32 - - - - - - - - - - - - -
- - - - - - 1.53 -4.73 - - - - - - - - - -0.45 2.09 3.59
- - - 0.78 - - 4.03 -3.63 -2.62 - - -2.88 - - -0.06 -0.64 - - - -
1.16 -0.05 0.36 1.49 1.2 -0.02 2.56 -2.81 - - - - - - - - - 0.2 0.1 0.23
1.71 - 0.45 - 0.88 - 3.58 -3.27 - - - - - - - - - - 0.29 -2.32
- - - - - - 3.91 - - - - - - - - - - - - 2.32
- - - - 0.65 - 4.2 -4.03 - - - - - - - - - - - -
-3.98 -3.42 -2.11 - -3.5 -1.95 2.31 -2.15 -6.12 - -2.32 -5.53 - - -4.81 - - 0.66 1.88 3.1
-2.93 -0.25 -3.0 -1.3 -2.0 - 2.54 -2.42 -4.58 - -3.02 -3.26 - - -3.19 - -1.5 -0.52 1.29 3.07
- - - - - 0.54 2.81 -3.21 - - - - - - - - - - 3.36 0.27
-3.74 0.05 - - - - 4.24 -6.53 - - - - - -4.75 - - - - - -
-1.82 0.36 -0.82 -2.65 -0.7 1.83 3.75 -7.93 - -10.65 - -11.86 - - -9.99 - - -6.21 -6.8 -9.16
-0.04 - - 1.96 -0.48 0.24 2.28 -2.08 -1.78 - - -0.83 - - - -1.77 - 0.79 -1.94 2.32
1.56 0.8 0.84 -2.12 -0.73 -1.62 2.03 -1.03 -0.66 -2.05 -0.3 -0.89 -1.55 -2.14 -0.52 -2.31 -3.71 -0.15 1.22 -0.33
-0.72 0.14 -1.05 -0.12 -0.68 1.67 2.43 -1.12 -1.84 -1.72 -2.21 -1.41 -3.16 -2.16 -1.58 -1.03 -1.72 0.48 -0.2 1.22
-1.73 -0.36 -1.42 -1.26 1.22 2.16 2.29 -1.84 -4.88 -4.96 -6.12 -0.66 -5.54 -2.43 -3.68 -1.71 -1.54 1.03 0.42 0.19
0.38 0.64 -0.24 2.36 1.47 -1.63 1.14 -0.7 -5.16 -2.92 -1.02 -2.76 -2.18 -1.19 -1.83 -0.45 0.12 -1.12 -2.96 0.17

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.