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Heatmap: Cluster_344 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
1.15 0.52 0.95 1.01 0.55 -1.34 -0.12 -0.5 -1.04 -1.02 -0.12 -1.2 -1.07 -1.3 -0.13 -0.95 -1.06 -0.02 0.79 0.09
1.15 0.03 0.8 0.62 0.42 0.04 0.03 0.09 -0.65 -0.81 -0.18 -0.66 -0.68 -0.67 -0.42 -0.61 -0.46 0.17 0.27 -0.72
Gb_01179 (SK32)
 0.99 -0.05 0.37 0.59 0.66 -0.08 -0.2 0.1 -0.76 -0.87 -0.42 -0.67 -0.25 -0.36 -0.39 -0.94 -0.65 0.52 0.38 -0.03
0.8 0.37 0.39 0.34 0.53 -0.05 -0.52 -0.22 -0.52 -0.59 -0.32 -0.85 0.4 0.06 -0.21 -0.59 -1.26 0.39 0.36 -0.29
Gb_01975 (RAD5)
 1.26 0.4 0.78 0.95 0.28 -1.06 -0.07 -0.82 -0.94 -1.17 -0.13 -1.64 -1.39 -1.51 0.02 -0.34 -1.37 0.55 0.43 0.59
Gb_02254 (NUDX19)
 0.29 0.9 0.68 0.72 0.71 -0.57 -0.48 -0.16 -0.49 -0.69 -0.43 -0.77 -0.32 -0.47 -0.56 -0.85 -0.67 0.25 0.56 0.03
1.2 -0.2 0.56 0.97 0.47 -1.23 -0.16 -0.48 -0.47 -0.68 0.04 -0.93 -0.43 -0.64 0.02 -0.48 -0.74 -0.33 0.86 -0.42
Gb_02983 (HIRA)
 0.93 -0.19 0.26 0.33 0.14 -0.46 -0.36 -0.19 -0.34 -0.31 0.33 -0.95 -0.09 -0.49 0.22 -0.37 -0.69 0.27 0.67 -0.15
Gb_03680 (MSI1)
 1.69 0.77 1.29 1.13 0.89 -0.69 0.26 -1.79 -2.4 -2.68 -1.85 -2.77 -2.26 -2.14 -1.78 -1.81 -1.9 -0.13 1.14 0.39
Gb_03881 (WEE1)
 1.57 0.8 1.28 1.11 0.8 -1.64 0.16 -1.34 -1.75 -1.86 -1.54 -1.83 -2.42 -2.18 -1.43 -1.28 -2.05 0.35 1.26 -0.26
1.32 0.21 0.55 1.03 0.85 0.12 -0.11 -0.46 -0.85 -0.93 -0.22 -1.0 -1.08 -1.56 -0.3 -0.98 -1.15 0.15 0.54 -0.5
0.72 0.81 0.5 0.81 0.77 -0.63 -1.38 -0.22 -0.74 -0.77 -0.7 -0.62 0.07 -0.08 -0.5 -1.52 -1.23 0.78 0.57 -0.48
0.91 0.8 0.69 0.99 0.88 -0.64 -0.19 -0.45 -1.11 -1.07 -0.82 -1.15 -1.22 -1.06 -0.68 -0.93 -1.18 0.36 0.7 0.4
0.81 0.43 0.47 0.48 0.37 0.06 -0.11 -0.09 -0.33 -0.46 -0.3 -1.12 -0.36 -0.63 -0.37 -0.64 -1.23 0.21 0.94 -0.38
1.14 0.25 1.08 0.53 0.37 -0.42 -0.38 -0.0 -0.42 -0.85 -0.27 -1.4 -0.45 -0.85 -0.27 -1.52 -1.93 0.38 0.97 -0.44
0.91 0.23 0.16 0.56 0.5 -0.93 0.17 -0.63 -0.75 -0.95 0.53 -1.67 -1.1 -1.36 0.67 -0.22 -0.97 0.14 0.96 -0.11
Gb_06339 (BSK2)
 1.0 0.26 0.48 0.73 0.73 -0.79 -0.45 -0.04 -0.48 -0.49 -0.31 -0.11 -0.82 -0.56 -0.49 -0.85 -0.46 0.26 0.41 -0.19
1.08 0.66 0.54 1.05 0.76 -0.61 -0.32 -0.55 -1.37 -1.43 -0.64 -1.12 -1.77 -1.8 -0.48 -1.19 -1.26 0.68 1.07 0.29
1.82 -0.02 0.92 0.96 0.96 -2.12 -0.59 -0.73 -1.27 -1.49 -0.78 -1.76 -3.02 -2.62 -1.0 -0.04 -1.32 -0.11 1.29 0.06
0.73 0.13 0.4 0.8 0.3 -0.12 -0.58 -0.29 -1.03 -0.86 -0.04 -1.01 -0.28 -0.5 -0.06 -0.61 -0.57 0.28 0.88 0.22
Gb_12442 (UGLYAH)
 0.54 1.26 0.79 0.02 0.51 -1.34 -0.55 -0.38 -0.91 -0.8 -0.88 -1.02 -0.41 -0.28 -0.48 -0.65 -0.53 0.54 0.85 0.18
Gb_12569 (SDG37)
 0.89 0.59 0.63 0.62 0.55 -2.13 -0.38 -0.36 -0.54 -0.37 0.33 -0.59 -0.84 -1.33 0.24 -0.88 -1.0 0.01 0.72 0.14
Gb_12783 (UVH6)
 1.41 0.03 0.69 0.76 0.69 -1.07 -0.5 -0.37 -1.07 -1.47 -0.72 -1.28 -0.6 -0.87 -0.78 -0.92 -1.1 0.44 1.25 0.11
Gb_13680 (CYCT1;4)
 0.55 0.63 -0.18 0.35 0.51 -0.27 -0.2 -0.15 -0.31 -0.4 0.2 -0.96 0.26 -0.11 0.25 -0.73 -1.21 0.19 0.47 -0.5
Gb_13934 (APC7)
 1.0 0.91 0.72 0.76 0.63 -1.15 -0.5 -1.03 -1.46 -1.52 -0.28 -1.6 -1.36 -1.55 -0.35 -1.26 -1.75 0.3 1.51 0.51
Gb_14139 (NRPD5)
 1.02 0.35 0.95 0.51 0.54 -0.46 -0.05 -0.41 -0.92 -1.11 -0.27 -1.02 -0.4 -0.55 -0.09 -0.71 -0.73 0.04 0.55 0.07
0.71 0.83 0.76 0.44 0.35 -1.66 -0.63 -0.47 -0.46 -0.41 -0.37 -0.52 -0.32 -0.4 -0.43 -0.55 -0.8 -0.21 0.64 0.72
0.88 0.85 0.92 0.86 0.59 -0.54 -0.37 -0.33 -0.77 -0.92 -0.75 -0.95 -0.59 -0.65 -0.46 -0.98 -1.26 0.22 0.58 0.06
1.5 -0.05 1.01 1.41 0.52 -1.51 0.48 -0.88 -0.86 -0.89 -0.83 -1.32 -0.99 -1.24 -0.69 -0.61 -0.64 -0.66 0.58 -0.35
1.22 0.14 0.46 0.52 0.47 -1.81 -0.8 -0.21 -0.32 -0.51 0.12 -0.64 -0.68 -0.69 -0.02 0.23 -0.31 -0.34 0.42 0.1
1.08 0.77 0.8 0.36 0.64 -1.01 -0.13 -0.59 -0.48 -0.93 -0.99 -1.01 -0.58 -0.75 -0.93 -0.44 -0.8 0.08 0.9 0.32
1.18 0.97 0.57 0.92 0.75 0.39 -0.05 -0.39 -1.35 -1.4 -0.78 -0.97 -0.55 -0.86 -0.96 -1.02 -1.29 -0.06 0.57 -0.48
1.13 0.62 0.78 0.95 0.74 -1.39 -0.27 -0.27 -0.8 -0.92 -0.8 -1.12 -0.18 -0.19 -0.77 -0.96 -1.16 0.08 0.62 -0.21
Gb_19112 (BGT)
 0.8 0.65 0.38 0.53 0.57 -0.71 -0.33 -0.26 -0.58 -0.68 0.06 -0.64 -0.36 -0.4 0.21 -0.68 -0.96 0.08 0.51 -0.11
Gb_19361 (XPB1)
 0.91 0.25 0.54 0.94 0.3 -0.09 0.48 -0.4 -0.51 -0.45 -0.63 -0.91 -0.66 -0.89 -0.6 -0.36 -0.81 0.1 0.7 -0.43
Gb_19625 (SIGB)
 1.58 1.02 0.86 0.66 0.65 -1.44 0.4 -0.93 -1.34 -1.8 -1.9 -1.76 -1.47 -1.53 -1.58 -0.81 -1.37 0.34 1.04 0.33
Gb_20030 (PMS1)
 1.33 0.46 0.89 0.94 0.47 -0.14 0.3 -1.09 -1.93 -1.97 -0.34 -2.29 -2.84 -2.88 -0.68 -2.01 -1.88 0.51 1.47 0.29
Gb_20978 (RBP47B)
 1.04 -0.82 0.29 0.9 0.79 -0.34 -0.11 -0.12 -0.64 -0.75 -0.43 -0.71 -0.13 -0.34 -0.27 -0.73 -0.46 0.31 0.19 0.11
Gb_20979 (RBP47C')
 0.9 -0.3 0.75 1.15 0.55 -0.32 -0.24 -0.1 -0.73 -0.84 -0.43 -0.89 -0.18 -0.34 -0.44 -0.8 -0.7 0.15 0.38 -0.13
0.6 0.89 0.56 0.41 0.36 -0.63 -0.08 -0.45 -0.28 -0.42 0.09 -1.01 -0.59 -0.8 0.2 -0.59 -1.05 -0.19 0.65 0.17
0.78 0.44 0.74 0.61 0.51 -1.03 0.24 -0.35 -0.51 -0.7 -0.43 -1.25 -0.83 -0.66 -0.38 -0.41 -0.95 0.22 0.97 0.02
0.56 1.26 0.72 1.06 0.42 -1.63 0.08 -0.47 -1.03 -1.21 -0.68 -1.05 -0.78 -1.08 -0.35 -0.77 -1.39 0.09 1.11 -0.13
Gb_23737 (SWA3)
 1.02 0.02 0.57 1.04 0.32 -0.03 -0.43 -0.16 -0.62 -0.71 -0.24 -0.53 0.01 -0.24 -0.39 -0.83 -0.47 -0.07 0.26 -0.51
Gb_23918 (UBC37)
 1.12 0.39 0.84 0.74 1.01 -0.66 -0.64 -0.2 -0.83 -0.88 -0.5 -1.01 -0.66 -0.77 -0.38 -1.56 -1.34 0.47 0.73 -0.28
Gb_24223 (ORC2)
 0.56 0.65 0.82 0.28 0.53 -0.6 -0.24 -0.34 -0.39 -0.5 -0.08 -0.76 -0.32 -0.49 -0.1 -0.64 -0.43 -0.1 0.62 -0.11
0.84 0.34 0.62 0.41 0.44 -0.69 -0.07 -0.41 -0.54 -0.71 -0.18 -0.87 -0.72 -0.77 0.03 -0.06 -0.84 0.33 0.51 0.34
1.24 1.04 1.02 1.26 0.65 -1.22 -0.28 -0.91 -1.16 -1.31 -1.16 -1.99 -1.22 -1.11 -1.11 -0.99 -2.27 0.23 0.81 0.33
Gb_27503 (CAK3AT)
 1.26 0.28 0.49 0.57 0.24 -0.13 0.01 -0.76 -0.83 -0.89 -0.51 -1.62 -1.16 -1.18 -0.35 -0.66 -1.02 0.09 1.07 0.78
1.12 0.06 0.4 1.16 0.9 -1.5 -0.46 -0.4 -0.46 -0.87 -0.36 -0.57 -1.12 -1.44 -0.25 -0.17 -0.86 0.48 0.66 -0.46
0.48 0.4 0.39 0.45 0.19 -0.38 -0.48 -0.26 -0.31 -0.3 0.06 -0.67 0.03 -0.11 -0.01 -0.28 -0.54 0.14 0.56 -0.28
Gb_29987 (SUVR4)
 0.96 1.08 0.74 0.61 0.5 -0.18 0.06 -0.99 -0.84 -1.2 -0.49 -1.61 -1.91 -2.12 -0.45 -0.07 -1.19 0.19 1.01 0.15
1.11 0.82 0.86 0.93 0.42 -0.35 -0.82 -0.29 -0.89 -1.03 -0.56 -1.28 -0.43 -0.42 -0.41 -1.02 -1.04 0.08 0.74 -0.36
Gb_31066 (DDL)
 0.92 0.1 0.6 0.89 0.43 0.04 0.07 -0.07 -0.57 -0.68 -0.18 -0.6 -0.13 -0.65 -0.24 -0.84 -1.01 0.02 0.34 -0.49
Gb_32070 (U2A')
 1.04 0.3 0.81 0.88 0.56 -0.98 -0.18 -0.18 -0.97 -0.95 -0.07 -0.93 -0.39 -0.82 -0.17 -0.86 -0.83 0.01 0.9 -0.56
0.93 0.38 0.68 0.65 0.51 -0.9 -0.2 -0.5 -0.85 -0.96 -0.93 -1.11 -1.09 -0.95 -0.86 -0.68 -0.27 0.5 1.12 0.53
Gb_32923 (EMB2762)
 1.19 0.75 0.76 1.06 0.53 -0.27 -0.33 -0.39 -0.87 -0.9 -0.21 -0.89 -1.24 -1.46 -0.17 -1.21 -1.4 -0.0 0.64 -0.16
Gb_33008 (FZR1)
 1.14 0.92 1.06 0.6 0.73 -1.14 -0.56 -0.7 -0.65 -0.79 -0.41 -1.34 -0.73 -0.91 -0.28 -0.7 -0.82 0.32 0.49 -0.41
Gb_33241 (SMC5)
 1.32 0.55 0.68 0.86 0.77 -0.86 -1.02 -0.44 -0.92 -0.91 -0.14 -1.31 -0.92 -1.21 -0.08 -0.81 -1.27 0.18 0.77 0.06
Gb_33900 (RACK1B_AT)
 1.33 0.96 1.3 1.2 0.72 -0.82 -0.13 -0.72 -1.14 -1.14 -0.82 -1.53 -1.14 -1.09 -0.76 -1.11 -1.02 0.18 -0.28 -0.37
1.1 0.46 0.24 0.81 0.25 -1.65 -0.81 -0.2 -0.17 -0.32 0.12 -0.99 -0.07 -0.36 0.0 -0.64 -0.86 0.15 0.37 -0.02
1.11 -0.3 0.62 0.75 0.55 0.02 -0.14 -0.17 -0.75 -0.97 -0.45 -0.82 -0.53 -0.85 -0.38 -0.83 -0.5 0.24 0.68 0.09
1.53 1.16 1.57 1.43 0.89 -1.45 -0.68 -1.15 -1.78 -2.03 -1.54 -2.0 -1.27 -1.5 -1.18 -1.37 -1.97 -0.24 0.62 -0.83
1.35 0.44 0.75 1.08 0.42 -1.01 -0.67 -0.58 -0.75 -0.88 -0.7 -1.0 -0.36 -0.71 -0.75 -0.49 -0.82 -0.07 0.59 0.25
Gb_38493 (SWA2)
 1.2 0.76 0.89 0.88 0.62 -0.79 -0.3 -0.33 -0.85 -1.14 -0.15 -1.2 -1.2 -1.24 0.16 -0.87 -1.25 0.01 0.68 -0.5
Gb_39448 (RFC3)
 1.3 0.26 1.61 1.06 0.73 -1.08 0.26 -1.03 -1.5 -1.59 -0.96 -1.53 -1.94 -1.91 -0.91 -2.32 -1.62 0.03 0.78 0.58
Gb_39904 (ARP5)
 1.3 0.53 0.66 0.78 0.58 -0.11 -0.39 -0.48 -1.12 -1.3 -0.52 -1.27 -0.63 -1.01 -0.4 -0.64 -0.83 -0.05 0.86 0.04
0.78 0.06 0.72 0.73 0.35 0.17 -0.32 -0.1 -0.68 -0.72 -0.27 -0.86 -0.12 -0.4 -0.14 -0.63 -0.62 0.14 0.49 -0.32
1.38 0.34 1.04 1.5 0.76 -1.68 0.02 -0.71 -0.97 -0.88 -1.07 -1.23 -1.03 -1.05 -1.06 -1.03 -0.45 0.03 0.53 -0.96
0.76 1.09 0.47 0.75 0.79 -0.06 0.08 -0.35 -0.99 -0.87 -0.51 -0.76 -1.13 -1.5 -0.31 -0.92 -1.11 -0.22 0.74 0.14

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.