Heatmap: Cluster_8 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
-0.32 -0.46 - 1.46 -0.16 - -1.05 0.48 -0.72 -0.12 0.54 - -0.39 - -1.01 1.96 -0.57 - 2.0 -2.81
-0.74 - 0.34 - - - -1.42 0.66 0.56 -0.66 -0.47 -2.78 0.63 -0.65 2.11 -0.11 0.69 - 1.43 0.56
- - - - - - - -0.99 - - - - - - - - - - 4.29 -
-0.73 -0.68 -2.17 2.51 -0.5 - -1.06 -0.97 -0.44 -2.44 -1.24 -2.38 -1.52 -1.0 -1.03 0.82 0.89 - 2.22 -
-0.03 - - 2.19 - - -0.9 -0.01 -0.41 - - - - -0.63 0.12 0.49 1.52 - 2.63 -
1.1 - - 2.15 - - - 0.27 -0.46 -0.5 -0.06 - - - 2.03 1.04 0.6 -0.78 0.65 -
- 4.31 - - - - - -2.17 - - - - - - - - - - - -
- - - - - - - - - - - - - - - 4.32 - - - -
-0.36 - -1.92 1.39 0.23 - -1.21 0.28 0.42 -1.09 0.66 -3.87 -0.85 -0.36 1.33 0.35 -5.93 -0.96 1.94 -0.81
- - 1.82 - -3.75 - 1.21 0.6 - - 1.72 - 1.46 - - - - - 2.7 -
0.18 - - - - - -1.32 0.22 -1.22 0.67 2.22 - -1.94 -0.87 -0.64 1.53 - - 2.65 -
-1.7 -0.59 -1.75 2.12 -1.75 - -2.37 0.19 -2.42 -1.53 -0.25 -2.72 0.28 0.28 -0.18 1.94 -1.64 - 1.05 0.75
0.04 1.83 - - 1.02 - -1.03 -0.03 -1.18 - - - -0.86 -1.16 0.59 1.21 0.9 - 1.99 -0.32
- -2.37 - 2.93 -0.14 - - -1.8 -1.19 - - - - - -5.47 2.64 - - 2.11 -
1.07 - - - - -0.59 -1.7 0.92 - -0.16 0.04 -1.2 0.73 0.63 -1.02 0.36 0.39 - 2.68 -
- - 3.86 - - - - - - - - - - - - - - - 2.45 -
- - - - - - - -0.35 0.1 - 1.58 - - - 1.45 - 2.17 - 2.98 -
-0.74 - - 2.98 - - -0.39 -0.57 - 0.54 - - 1.66 - - 1.29 - 0.18 0.91 -
- - - - - - - 0.52 - - - 0.25 0.83 0.76 2.03 - 2.33 - 2.25 -
- - - - - - - - - - - - - - - 4.32 - - - -
- - - - -0.53 - - 0.2 0.51 - -0.73 -2.41 1.16 1.12 0.24 2.31 -0.13 - 2.17 -
0.24 - -0.99 0.82 -0.83 - -0.37 -0.5 -0.46 -2.45 0.58 - 1.22 0.69 -2.17 1.64 1.01 -1.15 1.08 -2.07
-0.14 - -0.28 3.04 -2.35 - -0.04 -2.4 -0.03 1.9 - - -0.32 - -0.27 - - - 0.8 -0.68
1.22 - - - -0.46 - - 0.73 -0.72 - - - -0.28 1.49 1.9 1.87 - - 1.87 -
-2.06 - - - - - -0.7 -3.98 -1.57 - - - -2.76 -2.23 - - - - 3.25 3.15
- - - - - - - 1.42 0.6 - - - - 1.03 - 3.19 - - - 2.2
0.63 - - - - - - 0.49 - -15.57 - - 1.28 1.06 - 1.78 - - 2.43 1.88
- - 1.33 - - 1.18 0.57 0.88 1.29 0.02 0.25 -8.76 -0.23 - - - 1.39 - 1.92 -
- - - - - - - - - - - - - - - - - - - -
1.75 1.45 - - - - - 0.6 -1.33 - - -1.27 - -1.36 - - 0.24 - 2.91 1.32
-0.76 - -0.96 2.47 -0.19 -1.52 -1.37 -0.01 -1.12 - -1.15 - -1.67 - -1.79 2.1 -1.75 - 2.13 -1.97
2.68 - - - - - - 0.62 - - - - - 2.2 - - - - 2.9 -
- - - - - - - - - - - - - - - - - - 4.32 -
0.22 3.01 - 1.97 - - - -0.15 -1.63 - - -1.71 - - - 0.83 - -0.15 1.41 -
1.27 - -4.36 1.74 -2.02 -21.83 - 0.1 -0.55 -0.45 - -3.15 0.74 -0.52 0.7 1.46 -0.72 -1.56 1.17 0.51
-0.48 - - 3.31 - - -0.41 -1.02 - -3.86 -1.69 - - - - -0.18 - -1.72 2.3 0.74
- - - 3.77 - - - - - - - - - - - - - - 1.53 1.79
- - - 3.87 - 1.19 - 0.64 - - - - - - - - - - 0.63 -
-0.6 - - 3.02 - - - 0.14 - - 0.03 - -0.27 - -0.19 1.34 - - 1.97 -0.05
0.82 - - 2.45 0.16 - 0.05 0.86 - - - - - - 1.56 - - - 2.55 -
-0.35 0.04 - 2.88 - - - -1.86 - -0.76 0.82 -2.28 - - - 2.04 - -0.22 1.17 -0.35
0.54 - - - -0.32 - - 0.41 0.91 0.6 0.65 -1.01 -1.42 -0.64 0.6 - 1.72 1.29 1.42 -
0.64 - - - - - - 0.38 1.23 -0.31 -0.89 -3.12 1.23 1.28 -0.09 2.14 - - 1.48 -1.26
- 2.33 - - - - - -0.87 -2.04 - - - - - 1.94 - - 1.75 2.8 -
0.15 - 1.21 - - 0.26 1.45 0.46 - 0.61 - -1.88 -0.12 -1.44 1.75 - - - 1.99 -0.23
- - - - - - - 0.94 0.57 - - 1.89 2.01 0.71 2.02 - - - 1.66 -
0.24 - -2.05 1.19 -1.89 -1.85 - 0.1 -1.14 -1.88 0.63 - -1.32 -0.27 0.22 2.39 -0.55 -2.09 1.94 -
-0.18 -0.66 -1.54 2.72 -1.2 0.03 -2.49 -0.75 -1.38 - -0.44 -4.72 -0.2 -0.47 -0.83 -0.37 -1.21 -0.42 2.01 -
- - - - - - - - - - - - - - - - - - 4.32 -
1.74 - - - - 1.86 -0.63 0.8 0.96 - - - -0.29 - 1.58 - - - 2.3 -
- - - 2.77 - - - 0.53 0.04 0.17 0.32 -0.17 - -0.1 - - - - 2.7 -
- - - - 0.51 - -0.63 -0.48 - - 0.38 - - -1.02 - 3.24 1.71 - 1.44 -
-0.43 - - 1.66 - - -1.69 0.17 -1.39 -0.05 0.41 -3.82 0.81 0.78 -2.03 1.89 0.92 - 0.87 -0.35
- 2.36 1.19 2.54 - - - -1.12 - - - - 1.23 - 1.11 - - - 0.83 -
- - - - - - - - - - - - - - - - - - - -
0.46 -0.57 0.58 2.78 1.11 -1.4 -0.08 -1.69 -0.68 -2.55 - -3.68 -1.91 -3.13 -0.32 1.28 -1.24 - -0.7 -1.83
-0.02 -0.4 0.43 1.45 - -1.69 - 0.07 0.14 0.54 -0.93 -3.67 1.16 0.0 1.16 0.32 -0.39 - 1.13 -
-1.12 - -1.0 - -0.78 -5.46 - 0.82 -0.06 -2.34 0.73 0.96 -0.42 0.19 0.26 1.98 -0.04 - 1.96 -
-1.67 -0.82 -1.99 1.91 - -1.53 -2.6 -0.37 0.32 -0.7 -1.49 -2.82 0.66 0.91 -2.07 2.36 -1.11 -3.15 0.56 -0.74
- - - - 1.71 - - 0.09 - - - - - - - - - 3.13 2.79 -
0.79 1.32 - - 1.24 - - 0.09 -0.12 -0.98 - - 0.56 -1.31 0.06 1.85 0.86 - 1.19 -1.78
-0.37 -1.05 -1.21 -0.34 -0.13 - -1.87 0.08 -0.42 -0.45 -0.24 - 0.76 0.52 0.75 2.05 1.01 -1.26 0.28 -1.51
1.29 -0.95 - 2.63 - - -0.54 -0.12 -1.38 -1.11 0.86 - 0.56 -0.14 -2.43 1.04 -0.92 - 0.52 -
- - - - - - - 4.32 - - - - - - - - - - - -
- - - - - - - -1.77 - - - - 1.04 0.84 - - - - 3.99 -
0.68 - -2.37 2.3 0.44 - -1.15 -0.1 0.14 -2.42 -1.63 -3.01 0.54 -0.15 -0.85 1.34 0.4 -2.87 0.93 -
-0.02 - -0.65 2.47 - - -1.39 0.54 -0.91 -0.5 0.27 - - - -0.95 -0.37 -0.65 -0.92 2.35 0.0
0.46 - -0.18 2.73 0.12 - - 0.62 -0.21 - - - -2.2 -1.16 0.36 0.25 -0.01 -1.21 0.92 0.25
-0.12 - 0.0 1.56 - - -0.84 0.93 -1.68 -1.0 2.66 -1.1 -1.48 -0.65 -0.23 1.55 - - -1.75 -
1.02 - - - - - - -3.38 0.44 - - - - - - - 3.51 1.83 0.66 -
- - - - - - - - - - - - - - - - - - - -
- - - 3.96 - - - -0.1 - - - - - - - - - - 1.82 -
- - -1.53 - - - - -0.13 -0.15 - - -1.09 1.17 - 1.12 2.96 - - 2.37 -
- 3.47 - - - - - -1.34 - - - - - - - 3.1 - - - -
-0.22 - -2.78 2.55 -0.39 -2.57 -1.4 -1.0 -0.17 -1.68 0.73 - 0.7 0.25 -0.15 1.0 -0.51 -1.96 0.72 -3.03
- - - - - - 1.08 0.04 -0.39 - - -11.19 - - 0.61 2.26 2.39 - 2.19 -
1.6 - -0.63 2.12 -0.47 - -1.48 -0.09 -2.2 -1.44 - -1.41 0.86 - - 0.07 2.05 0.19 -0.21 -
0.25 - - 2.33 - - 0.41 0.18 - -1.17 -0.14 -2.21 0.84 0.69 - 1.73 - -0.6 1.25 -
-0.26 0.17 - 2.51 -0.99 - -1.85 -0.36 -2.55 - -0.79 - -0.73 0.04 - 1.29 1.1 -0.37 1.4 -1.29
0.12 - - 1.78 - - 1.82 -0.82 -1.5 0.26 0.04 - 0.6 -0.79 0.88 -0.23 - - 1.63 -0.11
-2.68 - - - - - - 0.98 -0.88 0.36 1.15 - -0.97 0.73 - - 1.84 -0.12 2.84 -
0.92 -0.15 - 3.1 -0.18 - -1.42 0.1 -1.31 -2.12 0.18 -3.26 0.68 -1.5 -1.5 - - -1.47 0.83 -
- - - 0.69 - - - -0.27 - -0.73 1.8 -1.29 -0.2 -1.39 0.38 2.11 0.99 - 2.08 -
- - - 2.54 -9.06 - 1.07 -1.4 -0.87 - - - 0.54 - - 2.15 - - 2.4 -
0.33 0.54 0.45 2.71 - 1.18 - -0.68 -1.29 - -0.46 - -0.2 -0.3 -0.6 - -0.49 - 1.21 -
- - - - - - - -0.52 - - - - - - - - - - 4.27 -
-0.49 - - 2.63 - - 0.88 -0.04 - - 1.88 - -1.19 -0.6 - 1.77 0.34 - -0.29 -
- - - - 1.97 - - -0.01 -0.88 - - - 0.46 0.77 0.59 1.79 - - 2.7 -
- - - - - - - 4.32 - - - - - - - - - - - -
-0.69 - - 3.2 - - -2.25 -0.43 -1.69 - - - - -3.23 - 3.03 - - -0.69 -
0.77 - 1.75 - 1.26 0.37 - 0.66 - - 0.13 - - - 0.06 - 0.7 -0.01 2.29 -
- - - - - - - - - - - - - - - - - - - -
0.16 -0.28 -0.3 2.58 -1.35 - - -0.66 -1.71 -1.25 -0.54 - -0.05 -1.29 0.68 1.58 -1.33 - 1.29 -
- - - - - - - - - - - - - - - - - - - -
-1.24 0.95 - 2.67 - - -1.26 -0.31 -1.34 -0.36 - - - -4.32 1.67 - -0.41 -1.84 2.2 -
1.15 - 0.31 1.17 - - -0.5 0.17 0.22 - 0.99 - 0.43 - 1.12 1.16 - - 1.83 -
0.26 0.53 0.95 1.49 - - -1.39 -0.01 -0.81 -1.41 0.71 - -0.18 -0.4 0.42 1.61 -0.09 -1.33 -0.13 -1.37
-1.82 - -0.27 2.44 - -4.51 - -0.21 -0.38 -1.5 -2.0 -6.96 -0.36 -2.77 -0.35 1.51 0.81 - 2.23 -2.36
2.22 - - - - - -0.04 -0.87 0.34 0.0 0.61 0.2 0.67 - - - 1.56 1.87 -0.56 -
- - - - - - - - - - - - - - - - - - - -
1.27 1.0 - 2.26 - - - 0.9 -1.34 -2.6 - - - -5.28 -6.71 1.87 - - 1.67 0.58
-1.14 - - 2.66 -0.06 - - 0.03 - - -0.2 -2.13 -0.32 -0.62 -0.38 2.3 - - 1.12 -0.24
- - - - - - - -0.19 - - - - - 1.77 - 2.28 3.28 - 0.17 -
0.79 0.84 1.85 1.38 - - - -0.47 -0.85 - 0.63 - -1.19 -1.21 - 0.64 -0.06 - 2.02 -
0.32 1.34 - - 0.27 - -0.25 1.09 -1.43 1.07 0.16 -0.6 0.66 - - - - - 1.79 1.47
0.75 -0.59 -1.82 1.98 0.56 -3.21 -0.96 -0.03 -1.66 -0.63 -1.48 -5.38 -0.04 -0.99 -0.35 0.71 -0.36 -0.66 1.69 -1.14
-0.35 - - -18.21 - - - 0.04 -1.02 0.1 -0.65 -2.51 - -1.17 - 3.36 -0.41 -0.86 1.93 -
1.46 - 2.01 - 1.47 - -0.28 -0.3 -1.15 - - -1.36 0.51 - - - - - 2.41 0.33
-1.85 0.28 -0.73 2.26 - -0.68 - 0.19 -0.18 - 0.09 - -2.27 - 1.39 1.33 -0.6 - 0.89 0.63
0.38 - -4.03 2.12 - - -1.89 -0.09 0.6 -0.26 -0.07 -3.01 -4.49 - -0.23 1.92 - -0.2 2.03 -
0.15 - - - - - - -0.47 0.43 0.27 2.08 - -0.27 - 1.93 1.82 - - 1.69 -
- - - - - - - - - - - - - - - - - - - -
1.99 - - - -2.84 - 1.04 -0.52 -2.12 -5.45 -0.2 - - -0.66 - 1.13 - -23.46 3.07 -0.36
2.83 - - - - - - -0.42 - - - - - - - - - 3.6 - -
- - - - - - - - - - - - - - - - - - 4.32 -
-1.44 - - 2.39 - 1.8 0.28 -0.98 - - - -1.42 - - 1.32 - - - 2.66 -8.35
- - - - - - - -0.63 2.89 3.58 - - - - - - - - - -
1.56 - - - - - - 0.77 1.02 - - - - 2.13 - - - 1.58 2.57 -
0.92 2.09 - - - - -2.14 -2.12 - - - - 0.12 - 1.04 2.63 - - 1.33 0.63
- - - - 0.49 - -0.19 0.76 0.93 - - -1.46 - - 0.31 2.61 - - 2.35 0.4
1.18 - 1.94 - - - - 1.09 0.45 - - - - - - - - - 3.38 -
1.35 0.12 -1.05 - 0.14 - -1.68 -0.59 - - - - -2.38 -2.55 0.47 1.65 0.33 -0.83 2.5 0.51
-0.05 - - 3.69 - - - -0.59 - - - - - - - 1.11 - - 1.71 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.