Heatmap: Cluster_11 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Ovule	Ovule, mature	Ovule, pollinated	Strobilus, female	Ovulate strobilus	Microstrobilus	Kernel	Leaf	Leaf, female	Leaf, male	Leaf, salicylic acid	Leaf, seedling	Leaf, truncation control	Leaf, truncation treatment	Leaf, water	Yellow-green stripe leaves	Green leaves	Stem	Cambium	Root
Gb_00269	-0.8	-1.46	-1.57	-0.79	-0.91	-1.44	-0.76	0.7	0.5	0.22	1.51	-0.31	0.43	-0.11	1.48	0.02	-0.16	-0.09	-0.89	-1.5
Gb_00651	-3.42	-1.86	-4.69	-22.44	-2.01	-2.83	0.75	0.1	0.32	0.22	1.39	-0.32	0.4	0.28	1.4	0.46	-1.75	-0.84	0.12	1.08
Gb_00776	0.7	-0.5	0.15	0.41	-0.33	-2.61	-0.96	0.38	0.71	0.18	0.35	-0.56	0.53	0.45	0.28	0.7	-0.24	-1.31	-0.82	-1.89
Gb_00841	-0.37	0.12	-1.55	-0.44	-0.38	-1.52	-1.1	0.49	0.09	0.01	0.81	-0.06	0.28	0.64	0.59	1.26	0.35	-0.32	-2.6	-1.41
Gb_00886	-1.77	-1.52	-2.39	-1.47	-1.75	-0.41	-0.39	0.63	0.78	0.62	1.46	-0.46	-0.05	-0.02	1.38	0.91	0.29	-1.75	-1.36	-1.45
Gb_01118	-0.93	-0.47	-1.48	0.24	0.22	-1.13	-1.43	0.22	-0.07	0.04	1.75	-0.21	-0.75	-0.98	1.57	-0.06	0.18	-0.3	-0.63	-2.03
Gb_01244	-0.24	-0.12	-0.31	-0.05	0.05	-1.04	-0.73	0.19	0.56	0.35	0.79	-0.38	-0.44	-0.77	0.8	0.56	0.18	-0.33	-0.39	-0.48
Gb_02558	-0.85	-0.34	-1.01	-1.27	-0.99	-1.47	-0.68	-0.06	0.46	0.3	1.59	-0.92	-0.0	-0.32	1.48	0.62	-0.32	-0.72	0.45	-2.08
Gb_05022	-0.4	-0.02	-0.69	-0.57	-0.14	-0.63	-1.18	0.04	0.44	0.19	0.19	-0.31	0.55	0.58	0.14	0.83	0.46	-0.1	-0.29	-0.95
Gb_05064	-0.54	-0.35	-0.87	-0.25	-0.33	-1.39	-0.43	0.22	0.03	-0.47	0.26	-0.85	0.92	0.87	0.25	1.2	0.36	0.09	-0.86	-1.16
Gb_05183	-0.13	-0.64	-0.67	0.07	0.04	-1.56	-1.36	0.29	0.7	0.51	0.32	-0.29	-0.44	-0.58	0.34	1.34	1.05	-0.88	-2.09	-0.69
Gb_06779	-3.47	-1.3	-2.15	-2.22	-3.59	-3.09	0.66	0.41	1.14	0.9	1.32	-0.34	0.84	0.71	1.18	0.39	-0.23	-1.86	-3.6	-1.42
Gb_07020	0.4	-1.17	-0.62	0.29	0.04	-0.85	-0.13	0.26	0.2	-0.03	0.18	-0.31	-0.05	-0.21	0.24	0.22	0.39	0.38	0.01	-0.31
Gb_07021	0.19	-1.04	-0.51	0.26	-0.31	-0.85	-0.37	0.44	0.14	0.0	0.42	-0.25	-0.11	-0.59	0.35	0.63	0.51	0.07	0.13	-0.47
Gb_07283	0.03	-0.04	-0.29	0.03	-0.07	-1.44	-0.31	0.09	0.37	0.1	0.76	-0.52	0.11	0.18	0.51	1.06	0.26	-0.78	-1.05	-1.99
Gb_07408	-0.54	-0.17	-0.64	-1.07	-0.77	-0.89	0.23	0.1	0.53	-0.04	0.81	-0.52	-0.15	-0.36	0.81	1.24	0.77	-1.37	-0.96	-0.59
Gb_07578	0.46	0.08	-0.16	0.22	0.28	-0.36	0.21	-0.04	0.19	-0.25	-0.15	-0.73	0.2	0.56	-0.18	-0.24	-1.59	-0.23	0.67	-0.41
Gb_07579	0.34	-0.56	-0.29	0.31	0.05	-0.38	0.2	-0.2	0.44	0.23	0.05	-1.15	0.32	0.64	-0.28	0.37	-0.7	-0.61	0.36	-0.56
Gb_07590	-1.99	-0.19	-1.18	-2.07	-1.18	-1.45	0.92	-0.04	0.78	0.49	0.99	-0.56	0.46	0.32	0.78	0.84	0.32	-1.04	-1.29	-1.14
Gb_07713	-	-	-5.16	-1.87	-	0.41	1.87	-0.14	0.55	0.56	1.52	-0.9	0.97	0.24	1.5	-0.36	-0.78	-	-4.31	-3.41
Gb_07886	-0.79	-0.72	-0.69	-0.43	-0.92	-0.91	-0.35	0.28	0.34	0.2	0.72	-0.37	0.68	0.56	0.73	0.35	0.55	-0.76	-0.43	-0.44
Gb_09040	-0.75	-2.14	-2.26	-1.93	-1.95	-2.29	1.47	-0.4	-1.1	0.34	1.72	-1.86	0.61	-1.07	1.68	-3.05	-1.85	-0.54	-0.23	1.19
Gb_09479	-5.84	-5.61	-5.18	-5.62	-4.54	-5.01	0.37	0.41	1.26	0.68	1.74	-0.42	1.48	1.04	1.76	-1.46	-1.65	-5.46	-5.63	-2.48
Gb_09641	-0.68	0.19	-0.01	-0.91	-0.97	-1.05	1.22	0.0	0.24	0.13	-0.93	-0.6	0.84	0.4	-1.1	-0.26	-1.55	-1.08	-1.35	1.73
Gb_09981	-0.61	0.62	-0.43	-0.28	-0.48	-1.14	-0.88	0.35	0.3	0.17	0.2	-0.5	0.57	0.34	0.28	1.07	-0.02	-0.3	-0.2	-1.69
Gb_10209	-3.32	-4.1	-3.18	-1.84	-3.33	-3.17	0.2	0.45	0.75	0.78	1.48	0.28	-0.02	-0.22	1.43	0.96	0.58	0.11	-2.3	-4.16
Gb_10861	-1.87	-1.72	-2.04	-1.6	-1.4	-1.14	-1.08	0.84	0.65	0.5	1.06	0.02	0.84	0.31	1.01	1.03	0.66	-1.44	-1.25	-2.18
Gb_11434	0.24	-0.59	-0.53	0.39	-0.2	-2.81	-1.54	0.13	0.21	-0.03	1.06	-0.6	-0.32	-0.41	0.86	1.03	0.88	-0.59	-0.52	-2.46
Gb_12513	-0.2	-0.93	-0.84	-0.3	-0.21	-0.47	-0.53	0.13	0.48	0.27	0.19	-0.49	0.5	0.54	0.12	0.82	0.46	-0.55	0.17	-0.95
Gb_12986	-0.53	0.42	0.17	0.2	-0.37	-0.68	-0.36	0.11	0.18	-0.09	0.49	-0.35	0.41	0.32	0.42	0.85	0.01	-0.83	-0.88	-1.59
Gb_14300	0.2	-0.39	-0.15	0.3	-0.04	-1.6	0.27	0.1	0.38	-0.05	0.35	-0.92	-0.72	-0.56	0.33	0.51	0.64	-0.44	0.43	-0.54
Gb_14488	-0.81	-1.19	-1.56	-0.95	-1.13	-0.64	0.19	0.1	0.58	0.27	1.34	-0.73	0.34	0.09	1.23	0.55	0.48	-1.25	-1.2	-0.77
Gb_14492	-0.82	-0.39	-0.78	-0.32	-0.16	-0.35	0.35	0.22	0.62	-0.1	1.32	-0.91	0.05	-0.42	1.04	0.07	0.07	-0.79	-0.56	-1.1
Gb_15540	0.16	-0.2	0.15	0.16	-0.06	-0.73	0.56	-1.59	-0.3	-0.52	1.71	-1.83	-3.02	-3.08	1.82	-0.72	-0.46	-0.92	-0.12	-0.32
Gb_16208	0.51	-0.05	0.28	0.3	0.33	-1.55	-0.59	0.13	0.23	-0.05	-0.08	-0.5	0.34	0.27	-0.21	0.81	0.23	-0.44	-1.02	-0.9
Gb_18005	0.23	-1.46	-1.14	-0.1	-1.05	-3.17	-3.07	0.26	0.73	0.3	1.02	-0.59	-0.3	-0.51	1.3	1.34	0.79	-1.07	-1.25	-1.15
Gb_18634	0.48	0.14	0.58	0.37	0.03	-0.24	0.13	0.07	-0.31	-0.42	0.09	-0.19	-1.12	-0.97	-0.08	0.69	0.23	-0.5	0.36	-0.94
Gb_20100	-1.03	-0.83	-1.4	-0.53	-0.52	-2.4	-1.65	0.68	0.94	0.69	1.1	0.1	0.51	-0.01	0.86	0.96	0.03	-1.28	-2.89	-0.77
Gb_20101	-1.54	-0.15	-0.96	-0.28	-1.05	-1.24	-1.41	0.61	0.98	0.83	0.92	-0.24	0.35	-0.22	0.89	0.94	-0.12	-0.99	-2.55	-0.69
Gb_20523	-1.0	-0.47	-0.96	-0.81	-0.88	-0.61	0.42	0.42	0.65	0.45	1.04	-0.39	0.34	-0.04	0.99	-0.54	-0.39	-0.72	-0.01	-0.34
Gb_20910	-0.9	-1.69	-1.32	-0.22	-1.03	-1.22	-1.01	0.13	0.56	0.41	0.89	-0.67	0.02	0.25	0.62	1.48	1.13	-0.62	-1.06	-1.92
Gb_21443	0.83	-0.64	-0.14	0.18	-0.15	-1.72	-0.57	0.25	0.28	0.02	0.25	-0.57	-0.18	-0.14	0.5	1.07	0.57	-0.7	-0.25	-2.81
Gb_21593	0.29	-0.91	-0.55	-0.81	-0.4	-2.71	-2.31	-0.03	-0.05	-0.03	1.63	-0.78	-1.55	-1.4	1.61	0.72	0.9	-0.04	-0.44	-1.79
Gb_22301	-0.76	-1.08	-1.59	-0.85	-1.46	-2.36	-0.24	-0.18	0.46	0.32	1.52	-0.89	-0.97	-1.0	1.65	0.69	0.21	-0.74	-1.62	0.92
Gb_22459	-1.18	-3.12	-2.61	-2.42	-0.61	-0.66	0.41	0.23	0.52	0.31	1.24	-0.67	-0.18	0.36	1.37	0.63	-0.15	-0.67	-0.35	0.04
Gb_22886	-1.5	-0.38	-1.72	-0.79	-0.41	-0.49	-0.17	0.2	0.51	0.54	1.58	-0.18	0.73	0.23	1.36	-0.48	-0.59	-1.59	-1.8	-1.52
Gb_23136	-0.39	-1.03	-1.16	-0.47	-0.53	-0.72	-0.57	0.11	0.48	0.13	1.23	-0.39	0.34	0.1	1.09	1.07	-0.16	-0.66	-1.2	-1.33
Gb_23819	0.12	0.36	-0.25	0.76	-0.84	-2.51	-0.36	0.09	0.74	0.14	-0.07	-0.4	0.55	0.6	-0.18	1.05	0.16	-1.95	-1.42	-1.52
Gb_23862	-0.08	-0.13	-0.41	-0.04	-0.29	-0.66	-0.72	0.35	0.34	0.05	0.3	-0.3	0.12	0.21	0.15	0.54	0.32	-0.13	0.09	-0.5
Gb_24273	-1.29	-1.68	-2.58	-3.42	-2.03	-2.66	1.63	-0.3	-0.55	0.25	1.0	-0.96	1.2	0.07	1.45	-1.07	-1.06	-0.69	-0.85	1.07
Gb_24274	-1.7	-4.13	-3.0	-3.75	-3.23	-3.8	0.29	-0.15	0.02	0.7	2.05	-0.73	1.04	0.17	1.83	-1.14	-1.28	-1.11	-2.26	0.55
Gb_24362	0.02	-0.87	-0.57	-0.04	-0.37	0.37	0.17	0.27	-0.12	0.07	0.71	0.15	-0.67	-1.04	0.87	-0.77	-0.16	0.02	0.65	-0.56
Gb_24807	1.27	0.16	0.27	-0.1	0.84	-1.49	0.92	-0.46	-1.12	-1.31	0.63	-0.26	-1.34	-1.77	0.15	-2.75	-1.81	0.11	-0.37	1.15
Gb_24817	0.44	-0.87	0.0	0.85	-0.22	-2.37	-1.06	0.13	0.26	0.0	0.56	-0.48	-0.22	-0.27	0.41	0.71	0.58	-0.41	-0.11	-1.13
Gb_25056	0.09	-0.7	-0.87	0.3	-0.1	-0.52	-1.96	0.01	0.35	0.05	0.79	-0.39	-0.15	-0.5	0.7	1.0	0.49	-0.21	-0.4	-0.8
Gb_25445	-0.04	0.16	-0.11	0.08	-0.05	-0.71	-0.71	0.4	0.5	0.18	0.25	-0.38	0.66	0.44	0.24	0.5	-0.22	-0.72	-1.29	-0.99
Gb_26874	-0.85	-0.53	-2.1	-1.45	-0.53	-1.47	-0.62	0.06	0.6	0.36	1.94	-0.52	-1.92	-1.41	1.32	1.0	0.55	-0.84	-1.62	-0.73
Gb_26875	-0.38	-0.51	-0.91	-0.41	-0.89	-1.24	-0.93	0.03	0.74	0.34	1.55	-0.8	-1.01	-1.28	1.32	0.98	0.35	-0.71	-0.85	-1.04
Gb_26996	-0.74	0.0	-1.36	-0.74	-0.63	-2.7	-1.21	0.53	0.64	0.87	1.05	-0.65	0.58	0.05	1.08	-0.02	-0.21	-0.78	0.33	-1.68
Gb_28247	-1.16	-1.2	-1.47	-1.98	-1.3	-2.43	-0.6	-1.68	0.28	0.15	1.74	-2.06	-3.19	-2.54	1.91	0.79	1.18	-1.4	-0.24	0.82
Gb_28345	-10.24	-	-	-8.55	-6.38	-8.01	0.76	-0.02	0.9	0.37	2.21	-0.74	1.04	1.05	2.0	-1.44	-1.94	-8.79	-9.24	-2.86
Gb_28346	-	-	-7.82	-5.26	-	-4.9	0.75	0.19	1.42	0.85	1.92	-0.04	0.46	0.53	1.96	-1.02	-1.07	-5.79	-9.6	-2.44
Gb_28347	-	-7.81	-8.98	-6.27	-6.63	-6.07	0.44	0.31	1.16	0.67	2.17	-0.52	0.71	0.77	2.06	-1.51	-1.68	-	-8.55	-2.61
Gb_28349	-4.4	-3.63	-4.19	-4.86	-4.7	-4.84	0.64	0.51	1.48	0.92	1.92	-0.36	0.4	0.15	1.97	-1.03	-1.39	-5.6	-5.24	-2.28
Gb_28705	-0.15	-1.63	-0.66	-0.28	-0.5	-0.26	-1.19	0.63	0.23	0.2	0.74	-0.29	0.42	0.39	0.68	0.4	0.94	-0.41	-3.05	-0.64
Gb_28812	-0.05	-0.43	-0.06	0.13	0.15	-0.49	-1.26	-0.02	0.16	0.18	1.28	-0.45	-1.95	-2.13	1.26	0.24	0.68	-0.72	-0.05	-1.49
Gb_29528	-0.84	-1.24	-0.5	-0.23	-0.29	-1.54	-1.63	-0.19	0.81	1.05	1.0	-1.14	0.72	0.56	0.95	0.35	0.16	-1.5	-3.1	-0.15
Gb_29532	-1.39	-1.65	-1.2	-0.62	-0.6	-1.27	-0.84	0.04	0.42	0.62	1.31	-0.39	0.08	-0.12	1.29	0.3	-0.15	-0.34	0.13	-0.01
Gb_30651	0.08	-0.43	-0.73	0.03	-0.29	-1.25	-0.66	0.37	0.79	0.55	0.9	-0.35	0.16	-0.02	0.82	0.18	-0.15	-0.68	-0.69	-1.23
Gb_31700	-0.97	0.06	-0.79	-1.59	-1.45	-2.2	-0.03	-0.32	0.13	0.09	1.56	-0.76	0.09	-0.2	1.56	0.79	-0.06	-0.49	-0.66	-0.88
Gb_32414	-0.06	0.0	-0.67	-0.81	0.22	-0.6	0.96	-0.08	0.64	0.22	0.41	-0.32	-0.76	-0.85	0.6	0.18	0.32	-0.66	-0.76	0.01
Gb_32567	-1.06	-0.78	-1.58	-1.78	-1.65	0.24	0.09	0.71	0.69	0.75	0.89	0.69	-0.61	-0.54	1.11	0.09	0.02	-0.07	-1.25	-1.3
Gb_32902	1.01	-0.22	-1.03	-	-1.0	-0.57	1.32	0.64	0.76	0.21	-0.44	-0.42	-0.39	-0.7	-1.01	-0.98	-1.88	0.04	1.53	-1.0
Gb_33035	0.29	-0.75	-0.42	0.61	0.06	-2.63	-1.1	0.44	0.79	0.63	0.63	-0.42	-0.62	-0.81	0.95	0.69	0.4	-0.57	-1.4	-2.47
Gb_33699	-0.14	-0.86	-0.46	-0.45	-0.45	-2.24	-0.91	0.04	0.7	0.42	0.95	-0.45	-0.32	-0.1	1.0	1.0	0.62	-0.46	-0.89	-1.28
Gb_33852	0.34	-0.69	-0.59	-0.07	-0.08	-2.61	-0.3	0.52	0.92	0.34	0.49	-0.54	-0.12	0.07	0.26	0.68	0.26	-0.76	-0.39	-0.8
Gb_33853	0.47	-0.4	-0.35	0.24	-0.1	-2.17	-0.64	0.41	0.77	0.28	0.32	-0.61	-0.06	-0.17	0.32	0.57	0.15	-0.82	0.22	-0.94
Gb_34413	-1.2	-0.49	-1.25	-0.8	-1.36	-1.53	0.01	0.41	0.76	0.29	0.61	-0.25	0.53	0.6	0.69	1.13	0.49	-0.78	-1.04	-1.93
Gb_34758	-0.33	-1.19	-0.69	-0.16	-0.19	-1.38	-1.57	0.16	0.28	-0.05	0.53	-0.04	-0.0	0.17	0.36	1.43	0.51	-0.02	-0.17	-0.88
Gb_34911	0.09	0.35	0.05	-0.03	-0.19	-0.06	-0.38	0.23	0.19	-0.03	0.21	-0.32	-0.09	-0.58	0.11	0.24	0.04	-0.23	0.6	-0.94
Gb_36025	0.23	0.51	0.28	0.17	-0.2	-0.96	-1.57	0.13	0.45	0.38	-0.06	-0.77	0.6	0.56	0.02	0.12	-0.07	-0.5	-0.24	-1.18
Gb_36250	-0.55	-0.84	-0.7	-0.37	-1.05	-0.53	-1.74	0.58	0.53	0.39	1.04	-0.05	0.43	-0.1	1.03	0.52	0.6	-0.31	-1.33	-2.91
Gb_37194	0.08	-0.82	-0.7	-0.46	-0.46	-1.46	-0.48	-0.05	0.26	0.08	1.45	-0.64	-0.67	-1.13	1.39	0.53	0.11	-0.53	-0.11	-0.36
Gb_39223	0.45	1.23	-0.57	-1.58	0.09	-0.12	0.97	-0.1	-0.33	-0.08	-0.68	-0.53	0.31	-0.19	-0.85	-0.62	-0.39	0.21	-1.15	0.73
Gb_40114	-0.51	-0.48	-0.72	-0.32	-0.52	-0.93	0.19	-0.17	0.17	-0.03	1.15	-0.82	0.18	-0.39	1.1	0.18	0.13	-0.73	-0.03	0.23
Gb_40452	0.37	-0.11	-0.14	-0.02	-0.59	-1.5	-1.63	0.11	0.73	0.54	1.0	-0.71	-0.99	-0.91	0.79	0.92	0.16	-0.86	-0.36	-0.65
Gb_40886	-1.03	-0.38	-1.71	-1.52	-1.62	-3.95	-1.39	-0.17	0.59	0.53	1.6	-0.78	-0.39	-0.54	1.39	1.31	0.66	-0.86	0.07	-2.95
Gb_41003	-0.15	-0.55	-0.33	0.25	0.2	-0.63	0.33	0.49	0.52	-0.24	0.47	-0.55	-0.96	-0.98	0.42	0.33	0.6	-0.08	0.16	-1.25
Gb_41311	0.31	-0.14	-0.03	0.45	-0.32	-1.49	-0.88	0.08	0.29	-0.25	0.25	-0.04	0.07	0.2	-0.04	1.19	0.55	-0.47	-0.63	-2.14
Gb_41379	-0.02	-0.46	-0.52	-0.35	-0.15	-0.99	-0.79	0.04	0.75	0.49	0.51	-0.59	0.37	0.21	0.52	0.57	0.18	-0.41	-0.23	-0.97

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.